RNA–Protein interactions for RNA: ENST00000512146.6

SNCAIP-216, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,849 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-216ENST00000512146 LARP6Q9BRS8 491 aaKnown RBP17.73■□□□□ 0.43
SNCAIP-216ENST00000512146 DSCC1Q9BVC3 393 aa17.73■□□□□ 0.43
SNCAIP-216ENST00000512146 GRPEL1Q9HAV7 217 aa17.73■□□□□ 0.43
SNCAIP-216ENST00000512146 TPCN1Q9ULQ1 816 aa17.73■□□□□ 0.43
SNCAIP-216ENST00000512146 SMC3Q9UQE7 1217 aa17.73■□□□□ 0.43
SNCAIP-216ENST00000512146 ANKRD36CQ5JPF3 1778 aa17.72■□□□□ 0.43
SNCAIP-216ENST00000512146 IRS4O14654 1257 aaPredicted RBP17.72■□□□□ 0.43
SNCAIP-216ENST00000512146 GPT2Q8TD30 523 aa17.72■□□□□ 0.43
SNCAIP-216ENST00000512146 XAGE2Q96GT9 111 aa17.72■□□□□ 0.43
SNCAIP-216ENST00000512146 ZSCAN22P10073 491 aaPredicted RBP17.72■□□□□ 0.43
SNCAIP-216ENST00000512146 SYT1P21579 422 aa17.72■□□□□ 0.43
SNCAIP-216ENST00000512146 ITGA6P23229 1130 aa17.72■□□□□ 0.43
SNCAIP-216ENST00000512146 CCDC158Q5M9N0 1113 aa17.72■□□□□ 0.43
SNCAIP-216ENST00000512146 CCDC129Q6ZRS4 1044 aa17.72■□□□□ 0.43
SNCAIP-216ENST00000512146 CHAMP1Q96JM3 812 aa17.72■□□□□ 0.43
SNCAIP-216ENST00000512146 ARXQ96QS3 562 aa17.72■□□□□ 0.43
SNCAIP-216ENST00000512146 GREM2Q9H772 168 aa17.72■□□□□ 0.43
SNCAIP-216ENST00000512146 CCDC87Q9NVE4 849 aa17.72■□□□□ 0.43
SNCAIP-216ENST00000512146 TRMT112Q9UI30 125 aaKnown RBP17.72■□□□□ 0.43
SNCAIP-216ENST00000512146 NWD2Q9ULI1 1742 aa17.72■□□□□ 0.43
SNCAIP-216ENST00000512146 UBN2Q6ZU65 1347 aa17.71■□□□□ 0.43
SNCAIP-216ENST00000512146 RNF113AO15541 343 aaKnown RBP17.71■□□□□ 0.43
SNCAIP-216ENST00000512146 STX6O43752 255 aa17.71■□□□□ 0.43
SNCAIP-216ENST00000512146 PDE8AO60658 829 aa17.71■□□□□ 0.43
SNCAIP-216ENST00000512146 PDIA4P13667 645 aaKnown RBP17.71■□□□□ 0.43
SNCAIP-216ENST00000512146 TOB2Q14106 344 aaPredicted RBP17.71■□□□□ 0.43
SNCAIP-216ENST00000512146 TAF7LQ5H9L4 462 aa17.71■□□□□ 0.43
SNCAIP-216ENST00000512146 FOXD4L5Q5VV16 416 aaPredicted RBP17.71■□□□□ 0.43
SNCAIP-216ENST00000512146 CCDC83Q8IWF9 413 aa17.71■□□□□ 0.43
SNCAIP-216ENST00000512146 FOXD4L4Q8WXT5 416 aaPredicted RBP17.71■□□□□ 0.43
SNCAIP-216ENST00000512146 ZNF512BQ96KM6 892 aaPredicted RBP17.71■□□□□ 0.43
SNCAIP-216ENST00000512146 RREB1Q92766 1687 aa17.71■□□□□ 0.43
SNCAIP-216ENST00000512146 ANKRD18BA2A2Z9 1011 aa17.7■□□□□ 0.42
SNCAIP-216ENST00000512146 MBD3O95983 291 aa17.7■□□□□ 0.42
SNCAIP-216ENST00000512146 CYP21A2P08686 494 aa17.7■□□□□ 0.42
SNCAIP-216ENST00000512146 ADORA1P30542 326 aa17.7■□□□□ 0.42
SNCAIP-216ENST00000512146 VGLL2Q8N8G2 317 aa17.7■□□□□ 0.42
SNCAIP-216ENST00000512146 TMEM87AQ8NBN3 555 aa17.7■□□□□ 0.42
SNCAIP-216ENST00000512146 TBC1D2BQ9UPU7 963 aa17.7■□□□□ 0.42
SNCAIP-216ENST00000512146 CCDC9Q9Y3X0 531 aaKnown RBP17.7■□□□□ 0.42
SNCAIP-216ENST00000512146 LOC102724428A0A0B4J2F2 783 aa17.7■□□□□ 0.42
SNCAIP-216ENST00000512146 SIK1P57059 783 aa17.7■□□□□ 0.42
SNCAIP-216ENST00000512146 NEK1Q96PY6 1258 aa17.7■□□□□ 0.42
SNCAIP-216ENST00000512146 TOM1O60784 492 aa17.69■□□□□ 0.42
SNCAIP-216ENST00000512146 ZFYP08048 801 aaPredicted RBP17.69■□□□□ 0.42
SNCAIP-216ENST00000512146 GJB2P29033 226 aa17.69■□□□□ 0.42
SNCAIP-216ENST00000512146 CRKLP46109 303 aaKnown RBP17.69■□□□□ 0.42
SNCAIP-216ENST00000512146 LRRFIP1Q32MZ4 808 aaKnown RBP17.69■□□□□ 0.42
SNCAIP-216ENST00000512146 LDHAL6AQ6ZMR3 332 aa17.69■□□□□ 0.42
SNCAIP-216ENST00000512146 CCDC85AQ96PX6 553 aaPredicted RBP17.69■□□□□ 0.42
SNCAIP-216ENST00000512146 MAST3O60307 1309 aa17.69■□□□□ 0.42
SNCAIP-216ENST00000512146 ATP2B3Q16720 1220 aa17.68■□□□□ 0.42
SNCAIP-216ENST00000512146 ZSCAN23Q3MJ62 389 aa17.68■□□□□ 0.42
SNCAIP-216ENST00000512146 TTC39AQ5SRH9 613 aa17.68■□□□□ 0.42
SNCAIP-216ENST00000512146 CAVIN1Q6NZI2 390 aaKnown RBP17.68■□□□□ 0.42
SNCAIP-216ENST00000512146 NUP98P52948 1817 aa17.68■□□□□ 0.42
SNCAIP-216ENST00000512146 LRP5O75197 1615 aa17.68■□□□□ 0.42
SNCAIP-216ENST00000512146 ATP6V1AP38606 617 aa17.68■□□□□ 0.42
SNCAIP-216ENST00000512146 ITPK1Q13572 414 aa17.68■□□□□ 0.42
SNCAIP-216ENST00000512146 METTL24Q5JXM2 366 aa17.68■□□□□ 0.42
SNCAIP-216ENST00000512146 PANK2Q9BZ23 570 aa17.68■□□□□ 0.42
SNCAIP-216ENST00000512146 MTMR6Q9Y217 621 aa17.68■□□□□ 0.42
SNCAIP-216ENST00000512146 CAMTA2O94983 1202 aa17.67■□□□□ 0.42
SNCAIP-216ENST00000512146 F13A1P00488 732 aa17.67■□□□□ 0.42
SNCAIP-216ENST00000512146 HMGB1P09429 215 aaKnown RBP17.67■□□□□ 0.42
SNCAIP-216ENST00000512146 GORABQ5T7V8 394 aa17.67■□□□□ 0.42
SNCAIP-216ENST00000512146 NECAB1Q8N987 351 aa17.67■□□□□ 0.42
SNCAIP-216ENST00000512146 SMARCC1Q92922 1105 aaPredicted RBP17.67■□□□□ 0.42
SNCAIP-216ENST00000512146 NUTM2BA6NNL0 878 aaPredicted RBP17.66■□□□□ 0.42
SNCAIP-216ENST00000512146 NUTM2EB1AL46 878 aaPredicted RBP17.66■□□□□ 0.42
SNCAIP-216ENST00000512146 HSPD1P10809 573 aaKnown RBP17.66■□□□□ 0.42
SNCAIP-216ENST00000512146 SCARF1Q14162 830 aa17.66■□□□□ 0.42
SNCAIP-216ENST00000512146 SLFNL1Q499Z3 407 aa17.66■□□□□ 0.42
SNCAIP-216ENST00000512146 PARP10Q53GL7 1025 aa17.66■□□□□ 0.42
SNCAIP-216ENST00000512146 NUTM2AQ8IVF1 878 aaPredicted RBP17.66■□□□□ 0.42
SNCAIP-216ENST00000512146 ACSBG1Q96GR2 724 aa17.66■□□□□ 0.42
SNCAIP-216ENST00000512146 ATP6V1DQ9Y5K8 247 aa17.66■□□□□ 0.42
SNCAIP-216ENST00000512146 PDE8BO95263 885 aa17.65■□□□□ 0.42
SNCAIP-216ENST00000512146 FKBP4Q02790 459 aaKnown RBP eCLIP17.65■□□□□ 0.42
SNCAIP-216ENST00000512146 SUSD4Q5VX71 490 aa17.65■□□□□ 0.42
SNCAIP-216ENST00000512146 STOX1Q6ZVD7 989 aa17.65■□□□□ 0.42
SNCAIP-216ENST00000512146 OSBP2Q969R2 916 aa17.65■□□□□ 0.42
SNCAIP-216ENST00000512146 TCEANC2Q96MN5 208 aa17.65■□□□□ 0.42
SNCAIP-216ENST00000512146 NCLP19338 710 aaKnown RBP17.65■□□□□ 0.42
SNCAIP-216ENST00000512146 AGXT2Q9BYV1 514 aa17.65■□□□□ 0.42
SNCAIP-216ENST00000512146 CNNM1Q9NRU3 951 aa17.65■□□□□ 0.42
SNCAIP-216ENST00000512146 TMEM63CQ9P1W3 806 aa17.65■□□□□ 0.42
SNCAIP-216ENST00000512146 NSFL1CQ9UNZ2 370 aaKnown RBP17.65■□□□□ 0.42
SNCAIP-216ENST00000512146 M0R2C6 588 aa17.64■□□□□ 0.41
SNCAIP-216ENST00000512146 ZAP70P43403 619 aa17.64■□□□□ 0.41
SNCAIP-216ENST00000512146 RTL9Q8NET4 1388 aa17.64■□□□□ 0.41
SNCAIP-216ENST00000512146 MYH3P11055 1940 aa17.63■□□□□ 0.41
SNCAIP-216ENST00000512146 PDCP20941 246 aa17.63■□□□□ 0.41
SNCAIP-216ENST00000512146 FGFR2P21802 821 aa17.63■□□□□ 0.41
SNCAIP-216ENST00000512146 EXOSC10Q01780 885 aaKnown RBP17.63■□□□□ 0.41
SNCAIP-216ENST00000512146 DHX32Q7L7V1 743 aaKnown RBP17.63■□□□□ 0.41
SNCAIP-216ENST00000512146 USP48Q86UV5 1035 aa17.63■□□□□ 0.41
SNCAIP-216ENST00000512146 UTP14AQ9BVJ6 771 aaKnown RBP17.63■□□□□ 0.41
SNCAIP-216ENST00000512146 ZNF831Q5JPB2 1677 aa17.63■□□□□ 0.41
SNCAIP-216ENST00000512146 MROH5Q6ZUA9 1318 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms