RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 CRAMP1Q96RY5 1269 aa24.53■■□□□ 1.52
SMAD1-211ENST00000512019 PPEF1O14829 653 aaPredicted RBP24.52■■□□□ 1.52
SMAD1-211ENST00000512019 HCLS1P14317 486 aaPredicted RBP24.52■■□□□ 1.52
SMAD1-211ENST00000512019 CC2D2BQ6DHV5 1058 aa24.52■■□□□ 1.52
SMAD1-211ENST00000512019 JDP2Q8WYK2 163 aa24.52■■□□□ 1.52
SMAD1-211ENST00000512019 CLEC11AQ9Y240 323 aa24.52■■□□□ 1.52
SMAD1-211ENST00000512019 ZBTB7BO15156 539 aaPredicted RBP24.51■■□□□ 1.51
SMAD1-211ENST00000512019 PDE8AO60658 829 aa24.51■■□□□ 1.51
SMAD1-211ENST00000512019 GPC2Q8N158 579 aa24.51■■□□□ 1.51
SMAD1-211ENST00000512019 NLRP3Q96P20 1036 aa24.51■■□□□ 1.51
SMAD1-211ENST00000512019 PLA2G12BQ9BX93 195 aa24.51■■□□□ 1.51
SMAD1-211ENST00000512019 GJA3Q9Y6H8 435 aa24.5■■□□□ 1.51
SMAD1-211ENST00000512019 CNTNAP1P78357 1384 aa24.5■■□□□ 1.51
SMAD1-211ENST00000512019 CTSWP56202 376 aa24.49■■□□□ 1.51
SMAD1-211ENST00000512019 TNS4Q8IZW8 715 aa24.49■■□□□ 1.51
SMAD1-211ENST00000512019 SUCLG2Q96I99 432 aa24.49■■□□□ 1.51
SMAD1-211ENST00000512019 CRBNQ96SW2 442 aa24.49■■□□□ 1.51
SMAD1-211ENST00000512019 GNAI2P04899 355 aa24.48■■□□□ 1.51
SMAD1-211ENST00000512019 MYH3P11055 1940 aa24.48■■□□□ 1.51
SMAD1-211ENST00000512019 EIF6P56537 245 aaKnown RBP24.48■■□□□ 1.51
SMAD1-211ENST00000512019 MAP1SQ66K74 1059 aaPredicted RBP24.48■■□□□ 1.51
SMAD1-211ENST00000512019 LARGE2Q8N3Y3 721 aa24.48■■□□□ 1.51
SMAD1-211ENST00000512019 LRRFIP2Q9Y608 721 aaKnown RBP24.47■■□□□ 1.51
SMAD1-211ENST00000512019 TMEM88BA6NKF7 163 aa24.46■■□□□ 1.51
SMAD1-211ENST00000512019 CAPN15O75808 1086 aa24.46■■□□□ 1.51
SMAD1-211ENST00000512019 PNMA8AQ86V59 439 aaPredicted RBP24.46■■□□□ 1.51
SMAD1-211ENST00000512019 SF3B3Q15393 1217 aaKnown RBP24.45■■□□□ 1.5
SMAD1-211ENST00000512019 CCDC152Q4G0S7 254 aa24.45■■□□□ 1.5
SMAD1-211ENST00000512019 GRIPAP1Q4V328 841 aa24.45■■□□□ 1.5
SMAD1-211ENST00000512019 CNTROBQ8N137 903 aa24.45■■□□□ 1.5
SMAD1-211ENST00000512019 BICC1Q9H694 974 aaKnown RBP24.45■■□□□ 1.5
SMAD1-211ENST00000512019 ZBTB40Q9NUA8 1239 aa24.45■■□□□ 1.5
SMAD1-211ENST00000512019 NEFLP07196 543 aa24.44■■□□□ 1.5
SMAD1-211ENST00000512019 SCNN1DP51172 638 aa24.44■■□□□ 1.5
SMAD1-211ENST00000512019 FOXO4P98177 505 aa24.44■■□□□ 1.5
SMAD1-211ENST00000512019 KAZALD1Q96I82 304 aa24.44■■□□□ 1.5
SMAD1-211ENST00000512019 ATP6V0A2Q9Y487 856 aa24.44■■□□□ 1.5
SMAD1-211ENST00000512019 TRPM7Q96QT4 1865 aa24.43■■□□□ 1.5
SMAD1-211ENST00000512019 PPIP5K2O43314 1243 aa24.43■■□□□ 1.5
SMAD1-211ENST00000512019 EPS15P42566 896 aa24.43■■□□□ 1.5
SMAD1-211ENST00000512019 VEGFBP49765 207 aa24.43■■□□□ 1.5
SMAD1-211ENST00000512019 IRX6P78412 446 aaPredicted RBP24.43■■□□□ 1.5
SMAD1-211ENST00000512019 AAMPQ13685 434 aa24.43■■□□□ 1.5
SMAD1-211ENST00000512019 AOC3Q16853 763 aa24.43■■□□□ 1.5
SMAD1-211ENST00000512019 RABL6Q3YEC7 729 aaPredicted RBP24.43■■□□□ 1.5
SMAD1-211ENST00000512019 EPHA10Q5JZY3 1008 aa24.43■■□□□ 1.5
SMAD1-211ENST00000512019 RTL9Q8NET4 1388 aa24.42■■□□□ 1.5
SMAD1-211ENST00000512019 LMBR1LQ6UX01 489 aa24.42■■□□□ 1.5
SMAD1-211ENST00000512019 NIM1KQ8IY84 436 aa24.42■■□□□ 1.5
SMAD1-211ENST00000512019 TTLL11Q8NHH1 800 aa24.42■■□□□ 1.5
SMAD1-211ENST00000512019 CSF1RP07333 972 aa24.41■■□□□ 1.5
SMAD1-211ENST00000512019 LMOD1P29536 600 aaPredicted RBP24.41■■□□□ 1.5
SMAD1-211ENST00000512019 FMR1Q06787 632 aaKnown RBP eCLIP24.41■■□□□ 1.5
SMAD1-211ENST00000512019 ANKRD44Q8N8A2 993 aa24.41■■□□□ 1.5
SMAD1-211ENST00000512019 C1orf115Q9H7X2 142 aa24.41■■□□□ 1.5
SMAD1-211ENST00000512019 CHMP3Q9Y3E7 222 aa24.41■■□□□ 1.5
SMAD1-211ENST00000512019 FOXN1O15353 648 aa24.4■■□□□ 1.5
SMAD1-211ENST00000512019 DDX46Q7L014 1031 aaKnown RBP24.4■■□□□ 1.5
SMAD1-211ENST00000512019 EXOC6Q8TAG9 804 aa24.4■■□□□ 1.5
SMAD1-211ENST00000512019 LRRC37AA6NMS7 1700 aa24.4■■□□□ 1.5
SMAD1-211ENST00000512019 FAM161AQ3B820 660 aa24.39■■□□□ 1.49
SMAD1-211ENST00000512019 CCDC85AQ96PX6 553 aaPredicted RBP24.39■■□□□ 1.49
SMAD1-211ENST00000512019 GREM2Q9H772 168 aa24.39■■□□□ 1.49
SMAD1-211ENST00000512019 COL4A1P02462 1669 aa24.39■■□□□ 1.49
SMAD1-211ENST00000512019 DUOX1Q9NRD9 1551 aa24.38■■□□□ 1.49
SMAD1-211ENST00000512019 MTX1Q13505 466 aa24.38■■□□□ 1.49
SMAD1-211ENST00000512019 SP8Q8IXZ3 490 aa24.38■■□□□ 1.49
SMAD1-211ENST00000512019 RTFDC1Q9BY42 306 aaPredicted RBP24.38■■□□□ 1.49
SMAD1-211ENST00000512019 TMX4Q9H1E5 349 aaPredicted RBP24.38■■□□□ 1.49
SMAD1-211ENST00000512019 IFIT5Q13325 482 aaKnown RBP24.37■■□□□ 1.49
SMAD1-211ENST00000512019 CCDC57Q2TAC2 916 aa24.37■■□□□ 1.49
SMAD1-211ENST00000512019 CDC5LQ99459 802 aaKnown RBP24.37■■□□□ 1.49
SMAD1-211ENST00000512019 ANKRD18BA2A2Z9 1011 aa24.36■■□□□ 1.49
SMAD1-211ENST00000512019 BBOX1O75936 387 aa24.36■■□□□ 1.49
SMAD1-211ENST00000512019 ITGA6P23229 1130 aa24.36■■□□□ 1.49
SMAD1-211ENST00000512019 CXCL9Q07325 125 aa24.36■■□□□ 1.49
SMAD1-211ENST00000512019 DPP8Q6V1X1 898 aaPredicted RBP24.36■■□□□ 1.49
SMAD1-211ENST00000512019 MPNDQ8N594 471 aa24.36■■□□□ 1.49
SMAD1-211ENST00000512019 RASSF10A6NK89 507 aa24.35■■□□□ 1.49
SMAD1-211ENST00000512019 SRGAP3O43295 1099 aa24.35■■□□□ 1.49
SMAD1-211ENST00000512019 GRAPQ13588 217 aa24.35■■□□□ 1.49
SMAD1-211ENST00000512019 DEFB115Q30KQ5 88 aa24.35■■□□□ 1.49
SMAD1-211ENST00000512019 CEP85Q6P2H3 762 aa24.35■■□□□ 1.49
SMAD1-211ENST00000512019 RPAP2Q8IXW5 612 aaPredicted RBP24.35■■□□□ 1.49
SMAD1-211ENST00000512019 SUPT20HQ8NEM7 779 aa24.35■■□□□ 1.49
SMAD1-211ENST00000512019 GRAPLQ8TC17 118 aaPredicted RBP24.35■■□□□ 1.49
SMAD1-211ENST00000512019 VPS33BQ9H267 617 aa24.35■■□□□ 1.49
SMAD1-211ENST00000512019 ZNRF3Q9ULT6 936 aa24.35■■□□□ 1.49
SMAD1-211ENST00000512019 USP50Q70EL3 339 aaPredicted RBP24.34■■□□□ 1.49
SMAD1-211ENST00000512019 SEC31BQ9NQW1 1179 aa24.34■■□□□ 1.49
SMAD1-211ENST00000512019 GPRC5DQ9NZD1 345 aa24.34■■□□□ 1.49
SMAD1-211ENST00000512019 ABT1Q9ULW3 272 aaKnown RBP24.34■■□□□ 1.49
SMAD1-211ENST00000512019 TRAF5O00463 557 aa24.33■■□□□ 1.49
SMAD1-211ENST00000512019 ATP8B2P98198 1209 aa24.33■■□□□ 1.49
SMAD1-211ENST00000512019 TAF7LQ5H9L4 462 aa24.33■■□□□ 1.49
SMAD1-211ENST00000512019 HMMRO75330 724 aa24.32■■□□□ 1.48
SMAD1-211ENST00000512019 IGHMBP2P38935 993 aaKnown RBP24.32■■□□□ 1.48
SMAD1-211ENST00000512019 KIAA2012Q0VF49 1180 aa24.32■■□□□ 1.48
SMAD1-211ENST00000512019 ANKRD18AQ8IVF6 992 aa24.32■■□□□ 1.48
SMAD1-211ENST00000512019 THSD7BQ9C0I4 1608 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms