RNA–Protein interactions for RNA: ENST00000511769.5

PTPN20-225, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-225ENST00000511769 MRC1P22897 1456 aa12.54□□□□□ -0.4
PTPN20-225ENST00000511769 TRIOBPQ9H2D6 2365 aa12.54□□□□□ -0.4
PTPN20-225ENST00000511769 KDM3BQ7LBC6 1761 aa12.54□□□□□ -0.4
PTPN20-225ENST00000511769 GMPSP49915 693 aaPredicted RBP12.54□□□□□ -0.4
PTPN20-225ENST00000511769 ERICH6BQ5W0A0 696 aa12.54□□□□□ -0.4
PTPN20-225ENST00000511769 ZKSCAN2Q63HK3 967 aa12.54□□□□□ -0.4
PTPN20-225ENST00000511769 MRPL50Q8N5N7 158 aaKnown RBP12.54□□□□□ -0.4
PTPN20-225ENST00000511769 ZNF330Q9Y3S2 320 aaPredicted RBP12.54□□□□□ -0.4
PTPN20-225ENST00000511769 KIF16BQ96L93 1317 aa12.54□□□□□ -0.4
PTPN20-225ENST00000511769 SNED1Q8TER0 1413 aa12.54□□□□□ -0.4
PTPN20-225ENST00000511769 TCERG1O14776 1098 aaKnown RBP12.53□□□□□ -0.4
PTPN20-225ENST00000511769 FKTNO75072 461 aa12.53□□□□□ -0.4
PTPN20-225ENST00000511769 EIF2S2P20042 333 aaKnown RBP12.53□□□□□ -0.4
PTPN20-225ENST00000511769 HDGFL1Q5TGJ6 251 aa12.53□□□□□ -0.4
PTPN20-225ENST00000511769 RASAL3Q86YV0 1011 aa12.53□□□□□ -0.4
PTPN20-225ENST00000511769 NOB1Q9ULX3 412 aaKnown RBP12.53□□□□□ -0.4
PTPN20-225ENST00000511769 TBC1D2BQ9UPU7 963 aa12.53□□□□□ -0.4
PTPN20-225ENST00000511769 SNRPA1P09661 255 aaKnown RBP12.52□□□□□ -0.41
PTPN20-225ENST00000511769 EIF5P55010 431 aaKnown RBP12.52□□□□□ -0.41
PTPN20-225ENST00000511769 PDE3AQ14432 1141 aa12.52□□□□□ -0.41
PTPN20-225ENST00000511769 NECTIN2Q92692 538 aa12.52□□□□□ -0.41
PTPN20-225ENST00000511769 FTSJ3Q8IY81 847 aaKnown RBP12.51□□□□□ -0.41
PTPN20-225ENST00000511769 ARHGAP45Q92619 1136 aa12.51□□□□□ -0.41
PTPN20-225ENST00000511769 ZNF496Q96IT1 587 aaPredicted RBP12.51□□□□□ -0.41
PTPN20-225ENST00000511769 TRIM17Q9Y577 477 aa12.51□□□□□ -0.41
PTPN20-225ENST00000511769 BRCA2P51587 3418 aa12.51□□□□□ -0.41
PTPN20-225ENST00000511769 HEG1Q9ULI3 1381 aa12.5□□□□□ -0.41
PTPN20-225ENST00000511769 ADM5C9JUS6 153 aa12.5□□□□□ -0.41
PTPN20-225ENST00000511769 SOX1O00570 391 aaPredicted RBP12.5□□□□□ -0.41
PTPN20-225ENST00000511769 ALDH1B1P30837 517 aa12.5□□□□□ -0.41
PTPN20-225ENST00000511769 NOM1Q5C9Z4 860 aaKnown RBP12.5□□□□□ -0.41
PTPN20-225ENST00000511769 ATF7IPQ6VMQ6 1270 aa12.5□□□□□ -0.41
PTPN20-225ENST00000511769 KRT26Q7Z3Y9 468 aa12.5□□□□□ -0.41
PTPN20-225ENST00000511769 NBPF5PQ86XG9 351 aaPredicted RBP12.5□□□□□ -0.41
PTPN20-225ENST00000511769 LRCH3Q96II8 777 aa12.5□□□□□ -0.41
PTPN20-225ENST00000511769 TEX13AQ9BXU3 409 aaPredicted RBP12.5□□□□□ -0.41
PTPN20-225ENST00000511769 API5Q9BZZ5 524 aaKnown RBP12.5□□□□□ -0.41
PTPN20-225ENST00000511769 HTTP42858 3142 aa12.49□□□□□ -0.41
PTPN20-225ENST00000511769 COL9A1P20849 921 aa12.49□□□□□ -0.41
PTPN20-225ENST00000511769 EVX2Q03828 476 aa12.49□□□□□ -0.41
PTPN20-225ENST00000511769 CXCL9Q07325 125 aa12.49□□□□□ -0.41
PTPN20-225ENST00000511769 DZIP1LQ8IYY4 767 aaKnown RBP12.49□□□□□ -0.41
PTPN20-225ENST00000511769 DBF4Q9UBU7 674 aaPredicted RBP12.49□□□□□ -0.41
PTPN20-225ENST00000511769 PTPRCP08575 1304 aa12.48□□□□□ -0.41
PTPN20-225ENST00000511769 SHTN1A0MZ66 631 aa12.48□□□□□ -0.41
PTPN20-225ENST00000511769 PPIP5K2O43314 1243 aa12.48□□□□□ -0.41
PTPN20-225ENST00000511769 VSIG10Q8N0Z9 540 aa12.48□□□□□ -0.41
PTPN20-225ENST00000511769 TMEM106CQ9BVX2 250 aa12.48□□□□□ -0.41
PTPN20-225ENST00000511769 UNC80Q8N2C7 3258 aa12.48□□□□□ -0.41
PTPN20-225ENST00000511769 CDHR2Q9BYE9 1310 aa12.47□□□□□ -0.41
PTPN20-225ENST00000511769 KLRG2A4D1S0 409 aaPredicted RBP12.47□□□□□ -0.41
PTPN20-225ENST00000511769 TRIM27P14373 513 aa12.47□□□□□ -0.41
PTPN20-225ENST00000511769 AOC3Q16853 763 aa12.47□□□□□ -0.41
PTPN20-225ENST00000511769 C20orf194Q5TEA3 1177 aa12.47□□□□□ -0.41
PTPN20-225ENST00000511769 CC2D2BQ6DHV5 1058 aa12.47□□□□□ -0.41
PTPN20-225ENST00000511769 OTOP1Q7RTM1 612 aa12.47□□□□□ -0.41
PTPN20-225ENST00000511769 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.47□□□□□ -0.41
PTPN20-225ENST00000511769 CLUAP1Q96AJ1 413 aa12.47□□□□□ -0.41
PTPN20-225ENST00000511769 CRBNQ96SW2 442 aa12.47□□□□□ -0.41
PTPN20-225ENST00000511769 HYPKQ9NX55 129 aa12.47□□□□□ -0.41
PTPN20-225ENST00000511769 CENPFP49454 3210 aa12.46□□□□□ -0.41
PTPN20-225ENST00000511769 PRAMEF22A3QJZ6 481 aa12.46□□□□□ -0.41
PTPN20-225ENST00000511769 CAMTA2O94983 1202 aa12.46□□□□□ -0.41
PTPN20-225ENST00000511769 EXOC6Q8TAG9 804 aa12.46□□□□□ -0.41
PTPN20-225ENST00000511769 PANK1Q8TE04 598 aa12.46□□□□□ -0.41
PTPN20-225ENST00000511769 ARMC5Q96C12 935 aa12.46□□□□□ -0.41
PTPN20-225ENST00000511769 R3HDMLQ9H3Y0 253 aa12.46□□□□□ -0.41
PTPN20-225ENST00000511769 CHPF2Q9P2E5 772 aa12.46□□□□□ -0.41
PTPN20-225ENST00000511769 STXBP5LQ9Y2K9 1186 aa12.46□□□□□ -0.41
PTPN20-225ENST00000511769 USP16Q9Y5T5 823 aa12.46□□□□□ -0.41
PTPN20-225ENST00000511769 STARD3NLO95772 234 aa12.45□□□□□ -0.42
PTPN20-225ENST00000511769 FLIIQ13045 1269 aa12.45□□□□□ -0.42
PTPN20-225ENST00000511769 FKBP5Q13451 457 aaPredicted RBP12.45□□□□□ -0.42
PTPN20-225ENST00000511769 SLC51AQ86UW1 340 aa12.45□□□□□ -0.42
PTPN20-225ENST00000511769 DPF3Q92784 378 aa12.45□□□□□ -0.42
PTPN20-225ENST00000511769 PRO3102Q9H379 93 aa12.45□□□□□ -0.42
PTPN20-225ENST00000511769 CHMP4BQ9H444 224 aaKnown RBP12.45□□□□□ -0.42
PTPN20-225ENST00000511769 PPP4R2Q9NY27 417 aa12.45□□□□□ -0.42
PTPN20-225ENST00000511769 CNOT7Q9UIV1 285 aaKnown RBP12.45□□□□□ -0.42
PTPN20-225ENST00000511769 ZNRF3Q9ULT6 936 aa12.45□□□□□ -0.42
PTPN20-225ENST00000511769 COG6Q9Y2V7 657 aa12.45□□□□□ -0.42
PTPN20-225ENST00000511769 H7C1D1 291 aa12.44□□□□□ -0.42
PTPN20-225ENST00000511769 RAD17O75943 681 aa12.44□□□□□ -0.42
PTPN20-225ENST00000511769 G2E3Q7L622 706 aa12.44□□□□□ -0.42
PTPN20-225ENST00000511769 NPM2Q86SE8 214 aaKnown RBP12.44□□□□□ -0.42
PTPN20-225ENST00000511769 MICALL2Q8IY33 904 aa12.44□□□□□ -0.42
PTPN20-225ENST00000511769 DCPSQ96C86 337 aaKnown RBP12.44□□□□□ -0.42
PTPN20-225ENST00000511769 RAPGEFL1Q9UHV5 662 aa12.44□□□□□ -0.42
PTPN20-225ENST00000511769 CACNA1FO60840 1977 aa12.44□□□□□ -0.42
PTPN20-225ENST00000511769 ERBB4Q15303 1308 aa12.44□□□□□ -0.42
PTPN20-225ENST00000511769 FAM177BA6PVY3 158 aa12.43□□□□□ -0.42
PTPN20-225ENST00000511769 DDX58O95786 925 aaKnown RBP12.43□□□□□ -0.42
PTPN20-225ENST00000511769 MYL6BP14649 208 aa12.43□□□□□ -0.42
PTPN20-225ENST00000511769 AAMPQ13685 434 aa12.43□□□□□ -0.42
PTPN20-225ENST00000511769 MVPQ14764 893 aaKnown RBP12.43□□□□□ -0.42
PTPN20-225ENST00000511769 SAMD7Q7Z3H4 446 aa12.43□□□□□ -0.42
PTPN20-225ENST00000511769 ITPRIPQ8IWB1 547 aa12.43□□□□□ -0.42
PTPN20-225ENST00000511769 DEFB123Q8N688 67 aa12.43□□□□□ -0.42
PTPN20-225ENST00000511769 PHAXQ9H814 394 aaKnown RBP12.43□□□□□ -0.42
PTPN20-225ENST00000511769 DDX19BQ9UMR2 479 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms