RNA–Protein interactions for RNA: ENST00000511669.1

CXCL3-204, Transcript of C-X-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CXCL3, Length 1,641 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-204ENST00000511669 SUSD4Q5VX71 490 aa19.77■□□□□ 0.76
CXCL3-204ENST00000511669 PRPF40BQ6NWY9 871 aaKnown RBP19.77■□□□□ 0.76
CXCL3-204ENST00000511669 TMX3Q96JJ7 454 aa19.77■□□□□ 0.76
CXCL3-204ENST00000511669 CCDC85AQ96PX6 553 aaPredicted RBP19.77■□□□□ 0.76
CXCL3-204ENST00000511669 RIPOR2Q9Y4F9 1068 aa19.77■□□□□ 0.76
CXCL3-204ENST00000511669 CYP46A1Q9Y6A2 500 aa19.77■□□□□ 0.76
CXCL3-204ENST00000511669 RTL9Q8NET4 1388 aa19.77■□□□□ 0.76
CXCL3-204ENST00000511669 PTH1RQ03431 593 aa19.76■□□□□ 0.75
CXCL3-204ENST00000511669 NECTIN1Q15223 517 aa19.76■□□□□ 0.75
CXCL3-204ENST00000511669 XAGE2Q96GT9 111 aa19.76■□□□□ 0.75
CXCL3-204ENST00000511669 U3KPZ7 1027 aaPredicted RBP19.76■□□□□ 0.75
CXCL3-204ENST00000511669 GOLIM4O00461 696 aa19.76■□□□□ 0.75
CXCL3-204ENST00000511669 CUL4AQ13619 759 aa19.76■□□□□ 0.75
CXCL3-204ENST00000511669 DDX46Q7L014 1031 aaKnown RBP19.76■□□□□ 0.75
CXCL3-204ENST00000511669 MPHOSPH8Q99549 860 aa19.76■□□□□ 0.75
CXCL3-204ENST00000511669 UPF3BQ9BZI7 483 aaKnown RBP19.76■□□□□ 0.75
CXCL3-204ENST00000511669 LRP5O75197 1615 aa19.75■□□□□ 0.75
CXCL3-204ENST00000511669 CASTP20810 708 aaKnown RBP19.75■□□□□ 0.75
CXCL3-204ENST00000511669 SSFA2P28290 1259 aa19.75■□□□□ 0.75
CXCL3-204ENST00000511669 VPS53Q5VIR6 699 aa19.75■□□□□ 0.75
CXCL3-204ENST00000511669 CREB3L3Q68CJ9 461 aa19.75■□□□□ 0.75
CXCL3-204ENST00000511669 LINC00116Q8NCU8 138 aa19.75■□□□□ 0.75
CXCL3-204ENST00000511669 ZSCAN31Q96LW9 406 aaPredicted RBP19.75■□□□□ 0.75
CXCL3-204ENST00000511669 ATRNO75882 1429 aa19.75■□□□□ 0.75
CXCL3-204ENST00000511669 RIC1Q4ADV7 1423 aa19.75■□□□□ 0.75
CXCL3-204ENST00000511669 SCN7AQ01118 1682 aa19.74■□□□□ 0.75
CXCL3-204ENST00000511669 HSPA1LP34931 641 aa19.74■□□□□ 0.75
CXCL3-204ENST00000511669 IGHMBP2P38935 993 aaKnown RBP19.74■□□□□ 0.75
CXCL3-204ENST00000511669 ANKRD1Q15327 319 aa19.74■□□□□ 0.75
CXCL3-204ENST00000511669 TTF1Q15361 905 aaPredicted RBP19.74■□□□□ 0.75
CXCL3-204ENST00000511669 ZSCAN25Q6NSZ9 544 aa19.74■□□□□ 0.75
CXCL3-204ENST00000511669 SYNE4Q8N205 404 aa19.74■□□□□ 0.75
CXCL3-204ENST00000511669 TNPO1Q92973 898 aaKnown RBP19.74■□□□□ 0.75
CXCL3-204ENST00000511669 ZNF512BQ96KM6 892 aaPredicted RBP19.74■□□□□ 0.75
CXCL3-204ENST00000511669 JAKMIP1Q96N16 626 aaKnown RBP19.74■□□□□ 0.75
CXCL3-204ENST00000511669 RPS6KA4O75676 772 aa19.73■□□□□ 0.75
CXCL3-204ENST00000511669 PDE8BO95263 885 aa19.73■□□□□ 0.75
CXCL3-204ENST00000511669 NTSR2O95665 410 aa19.73■□□□□ 0.75
CXCL3-204ENST00000511669 UQCRFS1P1P0C7P4 283 aa19.73■□□□□ 0.75
CXCL3-204ENST00000511669 PUM3Q15397 648 aaKnown RBP19.73■□□□□ 0.75
CXCL3-204ENST00000511669 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.73■□□□□ 0.75
CXCL3-204ENST00000511669 NYXQ9GZU5 481 aa19.73■□□□□ 0.75
CXCL3-204ENST00000511669 LIMCH1Q9UPQ0 1083 aa19.73■□□□□ 0.75
CXCL3-204ENST00000511669 ONECUT3O60422 494 aaPredicted RBP19.73■□□□□ 0.75
CXCL3-204ENST00000511669 TAF5LO75529 589 aa19.73■□□□□ 0.75
CXCL3-204ENST00000511669 DEKP35659 375 aaKnown RBP19.73■□□□□ 0.75
CXCL3-204ENST00000511669 TSGA10IPQ3SY00 556 aa19.73■□□□□ 0.75
CXCL3-204ENST00000511669 EDC3Q96F86 508 aaKnown RBP19.73■□□□□ 0.75
CXCL3-204ENST00000511669 CDC5LQ99459 802 aaKnown RBP19.73■□□□□ 0.75
CXCL3-204ENST00000511669 ZSWIM6Q9HCJ5 1215 aa19.73■□□□□ 0.75
CXCL3-204ENST00000511669 SH2B1Q9NRF2 756 aaPredicted RBP19.73■□□□□ 0.75
CXCL3-204ENST00000511669 PDRG1Q9NUG6 133 aa19.73■□□□□ 0.75
CXCL3-204ENST00000511669 CCNL1Q9UK58 526 aaPredicted RBP19.73■□□□□ 0.75
CXCL3-204ENST00000511669 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.73■□□□□ 0.75
CXCL3-204ENST00000511669 DDX60Q8IY21 1712 aaKnown RBP19.72■□□□□ 0.75
CXCL3-204ENST00000511669 SLC27A2O14975 620 aa19.72■□□□□ 0.75
CXCL3-204ENST00000511669 RNF113AO15541 343 aaKnown RBP19.72■□□□□ 0.75
CXCL3-204ENST00000511669 ZPR1O75312 459 aa19.72■□□□□ 0.75
CXCL3-204ENST00000511669 SLC5A1P13866 664 aa19.72■□□□□ 0.75
CXCL3-204ENST00000511669 GSE1Q14687 1217 aa19.72■□□□□ 0.75
CXCL3-204ENST00000511669 SKOR2Q2VWA4 1001 aaPredicted RBP19.72■□□□□ 0.75
CXCL3-204ENST00000511669 RUFY3Q7L099 469 aa19.72■□□□□ 0.75
CXCL3-204ENST00000511669 RASEFQ8IZ41 740 aa19.72■□□□□ 0.75
CXCL3-204ENST00000511669 LPIN2Q92539 896 aa19.72■□□□□ 0.75
CXCL3-204ENST00000511669 FAM177BA6PVY3 158 aa19.71■□□□□ 0.75
CXCL3-204ENST00000511669 HCLS1P14317 486 aaPredicted RBP19.71■□□□□ 0.75
CXCL3-204ENST00000511669 FKBP4Q02790 459 aaKnown RBP eCLIP19.71■□□□□ 0.75
CXCL3-204ENST00000511669 USPL1Q5W0Q7 1092 aa19.71■□□□□ 0.75
CXCL3-204ENST00000511669 BLOC1S2Q6QNY1 142 aa19.71■□□□□ 0.75
CXCL3-204ENST00000511669 CLEC17AQ6ZS10 378 aa19.71■□□□□ 0.75
CXCL3-204ENST00000511669 TTC14Q96N46 770 aa19.71■□□□□ 0.75
CXCL3-204ENST00000511669 RTCBQ9Y3I0 505 aaKnown RBP19.71■□□□□ 0.75
CXCL3-204ENST00000511669 LY75O60449 1722 aa19.71■□□□□ 0.75
CXCL3-204ENST00000511669 ARAP2Q8WZ64 1704 aa19.71■□□□□ 0.75
CXCL3-204ENST00000511669 GTF2E1P29083 439 aaPredicted RBP19.7■□□□□ 0.74
CXCL3-204ENST00000511669 ZMYM1Q5SVZ6 1142 aa19.7■□□□□ 0.74
CXCL3-204ENST00000511669 DSCC1Q9BVC3 393 aa19.7■□□□□ 0.74
CXCL3-204ENST00000511669 NARFQ9UHQ1 456 aa19.7■□□□□ 0.74
CXCL3-204ENST00000511669 SBF2Q86WG5 1849 aa19.7■□□□□ 0.74
CXCL3-204ENST00000511669 RPAP1Q9BWH6 1393 aaPredicted RBP19.69■□□□□ 0.74
CXCL3-204ENST00000511669 PDIA4P13667 645 aaKnown RBP19.69■□□□□ 0.74
CXCL3-204ENST00000511669 AK2P54819 239 aa19.69■□□□□ 0.74
CXCL3-204ENST00000511669 ZNF589Q86UQ0 364 aaPredicted RBP19.69■□□□□ 0.74
CXCL3-204ENST00000511669 VGLL2Q8N8G2 317 aa19.69■□□□□ 0.74
CXCL3-204ENST00000511669 ALDH8A1Q9H2A2 487 aaPredicted RBP19.69■□□□□ 0.74
CXCL3-204ENST00000511669 HMGB1P09429 215 aaKnown RBP19.68■□□□□ 0.74
CXCL3-204ENST00000511669 ADORA1P30542 326 aa19.68■□□□□ 0.74
CXCL3-204ENST00000511669 NOL8Q76FK4 1167 aaKnown RBP19.68■□□□□ 0.74
CXCL3-204ENST00000511669 SEPT12Q8IYM1 358 aa19.68■□□□□ 0.74
CXCL3-204ENST00000511669 NDUFB9Q9Y6M9 179 aa19.68■□□□□ 0.74
CXCL3-204ENST00000511669 MYH7P12883 1935 aa19.68■□□□□ 0.74
CXCL3-204ENST00000511669 GNPATO15228 680 aa19.67■□□□□ 0.74
CXCL3-204ENST00000511669 SETDB2Q96T68 719 aa19.67■□□□□ 0.74
CXCL3-204ENST00000511669 CTNNA3Q9UI47 895 aa19.67■□□□□ 0.74
CXCL3-204ENST00000511669 TAF1LQ8IZX4 1826 aa19.67■□□□□ 0.74
CXCL3-204ENST00000511669 ZGPATQ8N5A5 531 aaKnown RBP19.66■□□□□ 0.74
CXCL3-204ENST00000511669 BCL11BQ9C0K0 894 aaPredicted RBP19.66■□□□□ 0.74
CXCL3-204ENST00000511669 CYP2E1P05181 493 aaPredicted RBP19.65■□□□□ 0.74
CXCL3-204ENST00000511669 ARID4AP29374 1257 aaPredicted RBP19.65■□□□□ 0.74
CXCL3-204ENST00000511669 SF3B3Q15393 1217 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms