RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 PLD4Q96BZ4 506 aa5.98□□□□□ -1.45
CHD1-207ENST00000511628 ABI2Q9NYB9 513 aaPredicted RBP5.98□□□□□ -1.45
CHD1-207ENST00000511628 USP21Q9UK80 565 aa5.98□□□□□ -1.45
CHD1-207ENST00000511628 A0A0A0MRY4 1105 aa5.97□□□□□ -1.45
CHD1-207ENST00000511628 SOX18P35713 384 aa5.97□□□□□ -1.45
CHD1-207ENST00000511628 GATA4P43694 442 aa5.97□□□□□ -1.45
CHD1-207ENST00000511628 EIF1AXP47813 144 aaKnown RBP5.97□□□□□ -1.45
CHD1-207ENST00000511628 SF3B2Q13435 895 aaKnown RBP5.97□□□□□ -1.45
CHD1-207ENST00000511628 GRIK4Q16099 956 aa5.97□□□□□ -1.45
CHD1-207ENST00000511628 CD163Q86VB7 1156 aa5.97□□□□□ -1.45
CHD1-207ENST00000511628 LPIN3Q9BQK8 851 aa5.97□□□□□ -1.45
CHD1-207ENST00000511628 ELP3Q9H9T3 547 aa5.97□□□□□ -1.45
CHD1-207ENST00000511628 ANO2Q9NQ90 1003 aa5.97□□□□□ -1.45
CHD1-207ENST00000511628 SMNDC1O75940 238 aaKnown RBP eCLIP5.96□□□□□ -1.46
CHD1-207ENST00000511628 ELNP15502 786 aa5.96□□□□□ -1.46
CHD1-207ENST00000511628 MZF1P28698 734 aaPredicted RBP5.96□□□□□ -1.46
CHD1-207ENST00000511628 CHRNA4P43681 627 aa5.96□□□□□ -1.46
CHD1-207ENST00000511628 FKBP4Q02790 459 aaKnown RBP eCLIP5.96□□□□□ -1.46
CHD1-207ENST00000511628 ZNF211Q13398 564 aaPredicted RBP5.96□□□□□ -1.46
CHD1-207ENST00000511628 MSL1Q68DK7 614 aa5.96□□□□□ -1.46
CHD1-207ENST00000511628 PDE12Q6L8Q7 609 aaKnown RBP5.96□□□□□ -1.46
CHD1-207ENST00000511628 C9orf172C9J069 976 aa5.95□□□□□ -1.46
CHD1-207ENST00000511628 BAG6P46379 1132 aa5.95□□□□□ -1.46
CHD1-207ENST00000511628 GLYCTKQ8IVS8 523 aa5.95□□□□□ -1.46
CHD1-207ENST00000511628 IL22RA1Q8N6P7 574 aa5.95□□□□□ -1.46
CHD1-207ENST00000511628 OR13H1Q8NG92 308 aa5.95□□□□□ -1.46
CHD1-207ENST00000511628 TTC9Q92623 222 aa5.95□□□□□ -1.46
CHD1-207ENST00000511628 PROCP04070 461 aa5.94□□□□□ -1.46
CHD1-207ENST00000511628 PDGFAP04085 211 aa5.94□□□□□ -1.46
CHD1-207ENST00000511628 CES1P23141 567 aa5.94□□□□□ -1.46
CHD1-207ENST00000511628 USP5P45974 858 aa5.94□□□□□ -1.46
CHD1-207ENST00000511628 NRG1Q02297 640 aaPredicted RBP5.94□□□□□ -1.46
CHD1-207ENST00000511628 COL9A3Q14050 684 aaPredicted RBP5.94□□□□□ -1.46
CHD1-207ENST00000511628 CEP135Q66GS9 1140 aa5.94□□□□□ -1.46
CHD1-207ENST00000511628 DTWD1Q8N5C7 304 aa5.94□□□□□ -1.46
CHD1-207ENST00000511628 RETREG2Q8NC44 543 aa5.94□□□□□ -1.46
CHD1-207ENST00000511628 POLIQ9UNA4 740 aa5.94□□□□□ -1.46
CHD1-207ENST00000511628 H3BRB1 525 aa5.93□□□□□ -1.46
CHD1-207ENST00000511628 FURINP09958 794 aa5.93□□□□□ -1.46
CHD1-207ENST00000511628 EHHADHQ08426 723 aa5.93□□□□□ -1.46
CHD1-207ENST00000511628 DOC2BQ14184 412 aa5.93□□□□□ -1.46
CHD1-207ENST00000511628 FAM117BQ6P1L5 589 aa5.93□□□□□ -1.46
CHD1-207ENST00000511628 FMR1NBQ8N0W7 255 aaPredicted RBP5.93□□□□□ -1.46
CHD1-207ENST00000511628 DCAF11Q8TEB1 546 aa5.93□□□□□ -1.46
CHD1-207ENST00000511628 PMEPA1Q969W9 287 aa5.93□□□□□ -1.46
CHD1-207ENST00000511628 LACRTQ9GZZ8 138 aa5.93□□□□□ -1.46
CHD1-207ENST00000511628 MUC3BQ9H195 1237 aa5.93□□□□□ -1.46
CHD1-207ENST00000511628 TUT1Q9H6E5 874 aaKnown RBP5.93□□□□□ -1.46
CHD1-207ENST00000511628 TMEM63CQ9P1W3 806 aa5.93□□□□□ -1.46
CHD1-207ENST00000511628 KANSL3Q9P2N6 904 aa5.93□□□□□ -1.46
CHD1-207ENST00000511628 A6NHS1 94 aa5.92□□□□□ -1.46
CHD1-207ENST00000511628 PHACTR2O75167 634 aa5.92□□□□□ -1.46
CHD1-207ENST00000511628 ITGB2P05107 769 aa5.92□□□□□ -1.46
CHD1-207ENST00000511628 CYP2E1P05181 493 aaPredicted RBP5.92□□□□□ -1.46
CHD1-207ENST00000511628 CDC25BP30305 580 aa5.92□□□□□ -1.46
CHD1-207ENST00000511628 PHLDB3Q6NSJ2 640 aa5.92□□□□□ -1.46
CHD1-207ENST00000511628 CACTIN-AS1Q8N1I8 211 aa5.92□□□□□ -1.46
CHD1-207ENST00000511628 BRPF3Q9ULD4 1205 aa5.92□□□□□ -1.46
CHD1-207ENST00000511628 TRIM33Q9UPN9 1127 aa5.92□□□□□ -1.46
CHD1-207ENST00000511628 K7ELQ4 463 aaPredicted RBP5.91□□□□□ -1.46
CHD1-207ENST00000511628 HOXD8P13378 290 aaPredicted RBP5.91□□□□□ -1.46
CHD1-207ENST00000511628 CDC27P30260 824 aa5.91□□□□□ -1.46
CHD1-207ENST00000511628 CABP4P57796 275 aa5.91□□□□□ -1.46
CHD1-207ENST00000511628 ATP11AP98196 1134 aa5.91□□□□□ -1.46
CHD1-207ENST00000511628 SHISA2Q6UWI4 295 aa5.91□□□□□ -1.46
CHD1-207ENST00000511628 FBXO11Q86XK2 927 aa5.91□□□□□ -1.46
CHD1-207ENST00000511628 CCER1Q8TC90 406 aaPredicted RBP5.91□□□□□ -1.46
CHD1-207ENST00000511628 TMC1Q8TDI8 760 aa5.91□□□□□ -1.46
CHD1-207ENST00000511628 RASSF4Q9H2L5 321 aa5.91□□□□□ -1.46
CHD1-207ENST00000511628 GGNBP2Q9H3C7 697 aa5.91□□□□□ -1.46
CHD1-207ENST00000511628 PPME1Q9Y570 386 aa5.91□□□□□ -1.46
CHD1-207ENST00000511628 NDUFB5O43674 189 aa5.9□□□□□ -1.46
CHD1-207ENST00000511628 PTPRAP18433 802 aa5.9□□□□□ -1.46
CHD1-207ENST00000511628 SUZ12Q15022 739 aaKnown RBP5.9□□□□□ -1.46
CHD1-207ENST00000511628 GRIK5Q16478 980 aa5.9□□□□□ -1.46
CHD1-207ENST00000511628 COL13A1Q5TAT6 717 aaPredicted RBP5.9□□□□□ -1.46
CHD1-207ENST00000511628 MAP4K3Q8IVH8 894 aa5.9□□□□□ -1.46
CHD1-207ENST00000511628 C1orf127Q8N9H9 656 aa5.9□□□□□ -1.46
CHD1-207ENST00000511628 LENG1Q96BZ8 264 aaPredicted RBP5.9□□□□□ -1.46
CHD1-207ENST00000511628 PBX4Q9BYU1 374 aa5.9□□□□□ -1.46
CHD1-207ENST00000511628 CNTN3Q9P232 1028 aa5.9□□□□□ -1.46
CHD1-207ENST00000511628 EGFL7Q9UHF1 273 aa5.9□□□□□ -1.46
CHD1-207ENST00000511628 ICMTO60725 284 aa5.89□□□□□ -1.47
CHD1-207ENST00000511628 SERPINB4P48594 390 aa5.89□□□□□ -1.47
CHD1-207ENST00000511628 TRIM26Q12899 539 aaPredicted RBP5.89□□□□□ -1.47
CHD1-207ENST00000511628 IGF2-ASQ6U949 168 aa5.89□□□□□ -1.47
CHD1-207ENST00000511628 XKR5Q6UX68 686 aa5.89□□□□□ -1.47
CHD1-207ENST00000511628 TXNRD3Q86VQ6 643 aa5.89□□□□□ -1.47
CHD1-207ENST00000511628 SNX29Q8TEQ0 813 aa5.89□□□□□ -1.47
CHD1-207ENST00000511628 SRA1Q9HD15 236 aaKnown RBP5.89□□□□□ -1.47
CHD1-207ENST00000511628 CCDC87Q9NVE4 849 aa5.89□□□□□ -1.47
CHD1-207ENST00000511628 LINC01387J3KSC0 135 aa5.88□□□□□ -1.47
CHD1-207ENST00000511628 KIF4AO95239 1232 aa5.88□□□□□ -1.47
CHD1-207ENST00000511628 NEFLP07196 543 aa5.88□□□□□ -1.47
CHD1-207ENST00000511628 EDN3P14138 238 aa5.88□□□□□ -1.47
CHD1-207ENST00000511628 SELPP16109 830 aa5.88□□□□□ -1.47
CHD1-207ENST00000511628 NPR3P17342 541 aa5.88□□□□□ -1.47
CHD1-207ENST00000511628 MBTPS1Q14703 1052 aa5.88□□□□□ -1.47
CHD1-207ENST00000511628 SEMA6BQ9H3T3 888 aa5.88□□□□□ -1.47
CHD1-207ENST00000511628 PDE2AO00408 941 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms