RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 ESYT1Q9BSJ8 1104 aa8.46□□□□□ -1.05
CPNE4-208ENST00000511604 FAM169AQ9Y6X4 670 aa8.46□□□□□ -1.05
CPNE4-208ENST00000511604 RGS12O14924 1447 aa8.46□□□□□ -1.05
CPNE4-208ENST00000511604 EIF3JO75822 258 aaKnown RBP8.46□□□□□ -1.06
CPNE4-208ENST00000511604 MAP4K4O95819 1239 aaPredicted RBP8.46□□□□□ -1.06
CPNE4-208ENST00000511604 CHMLP26374 656 aa8.46□□□□□ -1.06
CPNE4-208ENST00000511604 CCDC96Q2M329 555 aa8.46□□□□□ -1.06
CPNE4-208ENST00000511604 TMEM132EQ6IEE7 984 aa8.46□□□□□ -1.06
CPNE4-208ENST00000511604 CEP85Q6P2H3 762 aa8.46□□□□□ -1.06
CPNE4-208ENST00000511604 TRIM74Q86UV6 250 aa8.46□□□□□ -1.06
CPNE4-208ENST00000511604 TRIM73Q86UV7 250 aa8.46□□□□□ -1.06
CPNE4-208ENST00000511604 IQCA1Q86XH1 822 aa8.46□□□□□ -1.06
CPNE4-208ENST00000511604 MICAL1Q8TDZ2 1067 aa8.46□□□□□ -1.06
CPNE4-208ENST00000511604 TNMDQ9H2S6 317 aa8.46□□□□□ -1.06
CPNE4-208ENST00000511604 CD248Q9HCU0 757 aa8.46□□□□□ -1.06
CPNE4-208ENST00000511604 MSH6P52701 1360 aa8.46□□□□□ -1.06
CPNE4-208ENST00000511604 A0A1B0GUA9 196 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 SNUPNO95149 360 aaKnown RBP8.45□□□□□ -1.06
CPNE4-208ENST00000511604 GNAI3P08754 354 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 GCKP35557 465 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 PDE1AP54750 535 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 GSDMDP57764 484 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 TBC1D25Q3MII6 688 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 VPS53Q5VIR6 699 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 RUFY3Q7L099 469 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 RABGGTAQ92696 567 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 RILPL2Q969X0 211 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 CLIC6Q96NY7 704 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 MEIS3Q99687 375 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 ACBD3Q9H3P7 528 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 PPP6R1Q9UPN7 881 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 PARP3Q9Y6F1 533 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 KIAA0556O60303 1618 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 ADGRB2O60241 1585 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 KDM5AP29375 1690 aaKnown RBP8.45□□□□□ -1.06
CPNE4-208ENST00000511604 INPP5BP32019 993 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 ST3GAL1Q11201 340 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 BRD3Q15059 726 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 SKIDA1Q1XH10 827 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 WLSQ5T9L3 541 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 RSRC2Q7L4I2 434 aaKnown RBP8.45□□□□□ -1.06
CPNE4-208ENST00000511604 HDXQ7Z353 690 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 RASEFQ8IZ41 740 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 FAM71BQ8TC56 605 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 UTP14AQ9BVJ6 771 aaKnown RBP8.45□□□□□ -1.06
CPNE4-208ENST00000511604 DACT1Q9NYF0 836 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 PIK3R4Q99570 1358 aa8.45□□□□□ -1.06
CPNE4-208ENST00000511604 GOLGA6L19H0YKK7 550 aa8.44□□□□□ -1.06
CPNE4-208ENST00000511604 KCNJ6P48051 423 aa8.44□□□□□ -1.06
CPNE4-208ENST00000511604 AK2P54819 239 aa8.44□□□□□ -1.06
CPNE4-208ENST00000511604 DHX8Q14562 1220 aaKnown RBP8.44□□□□□ -1.06
CPNE4-208ENST00000511604 PDCD2Q16342 344 aaPredicted RBP8.44□□□□□ -1.06
CPNE4-208ENST00000511604 SLC5A9Q2M3M2 681 aa8.44□□□□□ -1.06
CPNE4-208ENST00000511604 ANKRD44Q8N8A2 993 aa8.44□□□□□ -1.06
CPNE4-208ENST00000511604 PARD3BQ8TEW8 1205 aa8.44□□□□□ -1.06
CPNE4-208ENST00000511604 FAM204AQ9H8W3 233 aa8.44□□□□□ -1.06
CPNE4-208ENST00000511604 KIF9Q9HAQ2 790 aa8.44□□□□□ -1.06
CPNE4-208ENST00000511604 TFIP11Q9UBB9 837 aaKnown RBP8.44□□□□□ -1.06
CPNE4-208ENST00000511604 MTMR6Q9Y217 621 aa8.44□□□□□ -1.06
CPNE4-208ENST00000511604 TTC21BQ7Z4L5 1316 aa8.44□□□□□ -1.06
CPNE4-208ENST00000511604 ATP10DQ9P241 1426 aa8.44□□□□□ -1.06
CPNE4-208ENST00000511604 FAM83GA6ND36 823 aa8.44□□□□□ -1.06
CPNE4-208ENST00000511604 EBAG9O00559 213 aa8.44□□□□□ -1.06
CPNE4-208ENST00000511604 CAVIN2O95810 425 aa8.44□□□□□ -1.06
CPNE4-208ENST00000511604 HMOX1P09601 288 aa8.44□□□□□ -1.06
CPNE4-208ENST00000511604 FAM163BP0C2L3 166 aa8.44□□□□□ -1.06
CPNE4-208ENST00000511604 DCTN1Q14203 1278 aa8.44□□□□□ -1.06
CPNE4-208ENST00000511604 HSP90B2PQ58FF3 399 aa8.44□□□□□ -1.06
CPNE4-208ENST00000511604 ISM2Q6H9L7 571 aa8.44□□□□□ -1.06
CPNE4-208ENST00000511604 DNAJC14Q6Y2X3 702 aaPredicted RBP8.44□□□□□ -1.06
CPNE4-208ENST00000511604 RBM43Q6ZSC3 357 aaKnown RBP8.44□□□□□ -1.06
CPNE4-208ENST00000511604 CCDC83Q8IWF9 413 aa8.44□□□□□ -1.06
CPNE4-208ENST00000511604 HNRNPLLQ8WVV9 542 aaKnown RBP8.44□□□□□ -1.06
CPNE4-208ENST00000511604 MBIPQ9NS73 344 aa8.44□□□□□ -1.06
CPNE4-208ENST00000511604 ASXL2Q76L83 1435 aa8.44□□□□□ -1.06
CPNE4-208ENST00000511604 PHACTR2O75167 634 aa8.43□□□□□ -1.06
CPNE4-208ENST00000511604 NEFHP12036 1026 aa8.43□□□□□ -1.06
CPNE4-208ENST00000511604 PECAM1P16284 738 aaPredicted RBP8.43□□□□□ -1.06
CPNE4-208ENST00000511604 CLNS1AP54105 237 aaKnown RBP8.43□□□□□ -1.06
CPNE4-208ENST00000511604 BEND6Q5SZJ8 279 aaPredicted RBP8.43□□□□□ -1.06
CPNE4-208ENST00000511604 ARMC3Q5W041 872 aa8.43□□□□□ -1.06
CPNE4-208ENST00000511604 TRIM65Q6PJ69 517 aa8.43□□□□□ -1.06
CPNE4-208ENST00000511604 C11orf57Q6ZUT1 292 aaPredicted RBP8.43□□□□□ -1.06
CPNE4-208ENST00000511604 DRAXINQ8NBI3 349 aaPredicted RBP8.43□□□□□ -1.06
CPNE4-208ENST00000511604 FBXW7Q969H0 707 aa8.43□□□□□ -1.06
CPNE4-208ENST00000511604 PUS7Q96PZ0 661 aaKnown RBP8.43□□□□□ -1.06
CPNE4-208ENST00000511604 OSBPL5Q9H0X9 879 aaPredicted RBP8.43□□□□□ -1.06
CPNE4-208ENST00000511604 PTCH1Q13635 1447 aa8.43□□□□□ -1.06
CPNE4-208ENST00000511604 SKAP2O75563 359 aaPredicted RBP8.43□□□□□ -1.06
CPNE4-208ENST00000511604 GJB2P29033 226 aa8.43□□□□□ -1.06
CPNE4-208ENST00000511604 TXLNAP40222 546 aa8.43□□□□□ -1.06
CPNE4-208ENST00000511604 CCT5P48643 541 aa8.43□□□□□ -1.06
CPNE4-208ENST00000511604 ATP2B2Q01814 1243 aa8.43□□□□□ -1.06
CPNE4-208ENST00000511604 SNX1Q13596 522 aa8.43□□□□□ -1.06
CPNE4-208ENST00000511604 SAFB2Q14151 953 aaKnown RBP eCLIP8.43□□□□□ -1.06
CPNE4-208ENST00000511604 IQCB1Q15051 598 aa8.43□□□□□ -1.06
CPNE4-208ENST00000511604 CAPN7Q9Y6W3 813 aa8.43□□□□□ -1.06
CPNE4-208ENST00000511604 YTHDC2Q9H6S0 1430 aaKnown RBP8.43□□□□□ -1.06
CPNE4-208ENST00000511604 IL16Q14005 1332 aa8.43□□□□□ -1.06
CPNE4-208ENST00000511604 FRMD3A2A2Y4 597 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms