RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 NIM1KQ8IY84 436 aa8.97□□□□□ -0.97
PDLIM5-215ENST00000511586 DZIP1LQ8IYY4 767 aaKnown RBP8.97□□□□□ -0.97
PDLIM5-215ENST00000511586 TMEM57Q8N5G2 664 aa8.97□□□□□ -0.97
PDLIM5-215ENST00000511586 TBC1D16Q8TBP0 767 aa8.97□□□□□ -0.97
PDLIM5-215ENST00000511586 EYA3Q99504 573 aa8.97□□□□□ -0.97
PDLIM5-215ENST00000511586 MEIS3Q99687 375 aa8.97□□□□□ -0.97
PDLIM5-215ENST00000511586 POLLQ9UGP5 575 aa8.97□□□□□ -0.97
PDLIM5-215ENST00000511586 GGA1Q9UJY5 639 aa8.97□□□□□ -0.97
PDLIM5-215ENST00000511586 TAF1P21675 1872 aa8.97□□□□□ -0.97
PDLIM5-215ENST00000511586 XDHP47989 1333 aa8.97□□□□□ -0.97
PDLIM5-215ENST00000511586 UFL1O94874 794 aa8.96□□□□□ -0.98
PDLIM5-215ENST00000511586 MS4A1P11836 297 aa8.96□□□□□ -0.98
PDLIM5-215ENST00000511586 EIF6P56537 245 aaKnown RBP8.96□□□□□ -0.98
PDLIM5-215ENST00000511586 ANKRD44Q8N8A2 993 aa8.96□□□□□ -0.98
PDLIM5-215ENST00000511586 ZC3H12CQ9C0D7 883 aaKnown RBP8.96□□□□□ -0.98
PDLIM5-215ENST00000511586 ANKRD2Q9GZV1 360 aa8.96□□□□□ -0.98
PDLIM5-215ENST00000511586 COL4A1P02462 1669 aa8.96□□□□□ -0.98
PDLIM5-215ENST00000511586 MYH3P11055 1940 aa8.95□□□□□ -0.98
PDLIM5-215ENST00000511586 G3V3G9 751 aa8.95□□□□□ -0.98
PDLIM5-215ENST00000511586 RIMBP2O15034 1052 aa8.95□□□□□ -0.98
PDLIM5-215ENST00000511586 DDNO94850 711 aaPredicted RBP8.95□□□□□ -0.98
PDLIM5-215ENST00000511586 RLBP1P12271 317 aa8.95□□□□□ -0.98
PDLIM5-215ENST00000511586 CHRNDQ07001 517 aa8.95□□□□□ -0.98
PDLIM5-215ENST00000511586 DCAF8Q5TAQ9 597 aa8.95□□□□□ -0.98
PDLIM5-215ENST00000511586 ITPRIPQ8IWB1 547 aa8.95□□□□□ -0.98
PDLIM5-215ENST00000511586 ZNF594Q96JF6 807 aaPredicted RBP8.95□□□□□ -0.98
PDLIM5-215ENST00000511586 CNNM1Q9NRU3 951 aa8.95□□□□□ -0.98
PDLIM5-215ENST00000511586 ZNRF3Q9ULT6 936 aa8.95□□□□□ -0.98
PDLIM5-215ENST00000511586 LEMD3Q9Y2U8 911 aa8.95□□□□□ -0.98
PDLIM5-215ENST00000511586 LRRFIP2Q9Y608 721 aaKnown RBP8.95□□□□□ -0.98
PDLIM5-215ENST00000511586 LRRC37AA6NMS7 1700 aa8.94□□□□□ -0.98
PDLIM5-215ENST00000511586 GNAI2P04899 355 aa8.94□□□□□ -0.98
PDLIM5-215ENST00000511586 VEGFAP15692 232 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-215ENST00000511586 KCNJ4P48050 445 aa8.94□□□□□ -0.98
PDLIM5-215ENST00000511586 GPC2Q8N158 579 aa8.94□□□□□ -0.98
PDLIM5-215ENST00000511586 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.94□□□□□ -0.98
PDLIM5-215ENST00000511586 RRAGCQ9HB90 399 aa8.94□□□□□ -0.98
PDLIM5-215ENST00000511586 NMRK2Q9NPI5 230 aa8.94□□□□□ -0.98
PDLIM5-215ENST00000511586 ZNF541Q9H0D2 1346 aa8.94□□□□□ -0.98
PDLIM5-215ENST00000511586 CCDC88AQ3V6T2 1871 aa8.94□□□□□ -0.98
PDLIM5-215ENST00000511586 WTIPA6NIX2 430 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-215ENST00000511586 KIF3CO14782 793 aa8.93□□□□□ -0.98
PDLIM5-215ENST00000511586 ZBTB7BO15156 539 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-215ENST00000511586 PLIN1O60240 522 aa8.93□□□□□ -0.98
PDLIM5-215ENST00000511586 TNIP1Q15025 636 aa8.93□□□□□ -0.98
PDLIM5-215ENST00000511586 DOK7Q18PE1 504 aa8.93□□□□□ -0.98
PDLIM5-215ENST00000511586 C16orf71Q8IYS4 520 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-215ENST00000511586 HELBQ8NG08 1087 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-215ENST00000511586 PANK1Q8TE04 598 aa8.93□□□□□ -0.98
PDLIM5-215ENST00000511586 GPR101Q96P66 508 aaPredicted RBP8.93□□□□□ -0.98
PDLIM5-215ENST00000511586 PUS3Q9BZE2 481 aaKnown RBP8.93□□□□□ -0.98
PDLIM5-215ENST00000511586 DBNDD1Q9H9R9 158 aa8.93□□□□□ -0.98
PDLIM5-215ENST00000511586 RIPOR2Q9Y4F9 1068 aa8.93□□□□□ -0.98
PDLIM5-215ENST00000511586 GJA3Q9Y6H8 435 aa8.93□□□□□ -0.98
PDLIM5-215ENST00000511586 ZNF804BA4D1E1 1349 aa8.93□□□□□ -0.98
PDLIM5-215ENST00000511586 DUOX1Q9NRD9 1551 aa8.93□□□□□ -0.98
PDLIM5-215ENST00000511586 DICER1Q9UPY3 1922 aaKnown RBP8.93□□□□□ -0.98
PDLIM5-215ENST00000511586 TIAM2Q8IVF5 1701 aa8.92□□□□□ -0.98
PDLIM5-215ENST00000511586 COL4A5P29400 1685 aa8.92□□□□□ -0.98
PDLIM5-215ENST00000511586 MED23Q9ULK4 1368 aa8.92□□□□□ -0.98
PDLIM5-215ENST00000511586 MROH5Q6ZUA9 1318 aa8.92□□□□□ -0.98
PDLIM5-215ENST00000511586 IQCA1LA6NCM1 817 aa8.92□□□□□ -0.98
PDLIM5-215ENST00000511586 YDJCA8MPS7 323 aa8.92□□□□□ -0.98
PDLIM5-215ENST00000511586 ECE2O60344 883 aa8.92□□□□□ -0.98
PDLIM5-215ENST00000511586 TAF5LO75529 589 aa8.92□□□□□ -0.98
PDLIM5-215ENST00000511586 RFX5P48382 616 aaPredicted RBP8.92□□□□□ -0.98
PDLIM5-215ENST00000511586 PTPN12Q05209 780 aaKnown RBP8.92□□□□□ -0.98
PDLIM5-215ENST00000511586 CXCL9Q07325 125 aa8.92□□□□□ -0.98
PDLIM5-215ENST00000511586 LRRC24Q50LG9 513 aa8.92□□□□□ -0.98
PDLIM5-215ENST00000511586 CIAPIN1Q6FI81 312 aa8.92□□□□□ -0.98
PDLIM5-215ENST00000511586 KLHDC4Q8TBB5 520 aa8.92□□□□□ -0.98
PDLIM5-215ENST00000511586 L3MBTL3Q96JM7 780 aaPredicted RBP8.92□□□□□ -0.98
PDLIM5-215ENST00000511586 FBXO3Q9UK99 471 aa8.92□□□□□ -0.98
PDLIM5-215ENST00000511586 POTECB2RU33 542 aa8.91□□□□□ -0.98
PDLIM5-215ENST00000511586 EYA2O00167 538 aa8.91□□□□□ -0.98
PDLIM5-215ENST00000511586 SRGAP3O43295 1099 aa8.91□□□□□ -0.98
PDLIM5-215ENST00000511586 RAD17O75943 681 aa8.91□□□□□ -0.98
PDLIM5-215ENST00000511586 CIAO1O76071 339 aa8.91□□□□□ -0.98
PDLIM5-215ENST00000511586 MTX1Q13505 466 aa8.91□□□□□ -0.98
PDLIM5-215ENST00000511586 PDE3AQ14432 1141 aa8.91□□□□□ -0.98
PDLIM5-215ENST00000511586 MVPQ14764 893 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-215ENST00000511586 METTL24Q5JXM2 366 aa8.91□□□□□ -0.98
PDLIM5-215ENST00000511586 C15orf52Q6ZUT6 534 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-215ENST00000511586 PODNQ7Z5L7 613 aa8.91□□□□□ -0.98
PDLIM5-215ENST00000511586 COA1Q9GZY4 146 aa8.91□□□□□ -0.98
PDLIM5-215ENST00000511586 CHMP4BQ9H444 224 aaKnown RBP8.91□□□□□ -0.98
PDLIM5-215ENST00000511586 LTBP1Q14766 1721 aa8.91□□□□□ -0.98
PDLIM5-215ENST00000511586 SNAP23O00161 211 aa8.9□□□□□ -0.98
PDLIM5-215ENST00000511586 TOMM70O94826 608 aa8.9□□□□□ -0.98
PDLIM5-215ENST00000511586 PDE8BO95263 885 aa8.9□□□□□ -0.98
PDLIM5-215ENST00000511586 LMOD1P29536 600 aaPredicted RBP8.9□□□□□ -0.98
PDLIM5-215ENST00000511586 ATP8B2P98198 1209 aa8.9□□□□□ -0.98
PDLIM5-215ENST00000511586 UBE4AQ14139 1066 aa8.9□□□□□ -0.98
PDLIM5-215ENST00000511586 TXNRD3Q86VQ6 643 aa8.9□□□□□ -0.98
PDLIM5-215ENST00000511586 SIL1Q9H173 461 aa8.9□□□□□ -0.98
PDLIM5-215ENST00000511586 COPRSQ9NQ92 184 aa8.9□□□□□ -0.98
PDLIM5-215ENST00000511586 HACL1Q9UJ83 578 aa8.9□□□□□ -0.98
PDLIM5-215ENST00000511586 DDX19BQ9UMR2 479 aa8.9□□□□□ -0.98
PDLIM5-215ENST00000511586 COG6Q9Y2V7 657 aa8.9□□□□□ -0.98
PDLIM5-215ENST00000511586 WDR90Q96KV7 1748 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms