RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 TREML1Q86YW5 311 aa6.65□□□□□ -1.34
TOPBP1-208ENST00000511439 COL26A1Q96A83 441 aa6.65□□□□□ -1.34
TOPBP1-208ENST00000511439 FAM13BQ9NYF5 915 aa6.65□□□□□ -1.34
TOPBP1-208ENST00000511439 BAZ1BQ9UIG0 1483 aaKnown RBP6.65□□□□□ -1.35
TOPBP1-208ENST00000511439 CEP164Q9UPV0 1460 aa6.65□□□□□ -1.35
TOPBP1-208ENST00000511439 ZBTB42B2RXF5 422 aa6.64□□□□□ -1.35
TOPBP1-208ENST00000511439 OPLAHO14841 1288 aa6.64□□□□□ -1.35
TOPBP1-208ENST00000511439 EIF2AK2P19525 551 aaKnown RBP6.64□□□□□ -1.35
TOPBP1-208ENST00000511439 BRD2P25440 801 aaKnown RBP6.64□□□□□ -1.35
TOPBP1-208ENST00000511439 SOX18P35713 384 aa6.64□□□□□ -1.35
TOPBP1-208ENST00000511439 GRIK5Q16478 980 aa6.64□□□□□ -1.35
TOPBP1-208ENST00000511439 IGF2-ASQ6U949 168 aa6.64□□□□□ -1.35
TOPBP1-208ENST00000511439 RGL4Q8IZJ4 473 aa6.64□□□□□ -1.35
TOPBP1-208ENST00000511439 CMTR1Q8N1G2 835 aaKnown RBP6.64□□□□□ -1.35
TOPBP1-208ENST00000511439 TP53INP1Q96A56 240 aa6.64□□□□□ -1.35
TOPBP1-208ENST00000511439 SMG9Q9H0W8 520 aaKnown RBP6.64□□□□□ -1.35
TOPBP1-208ENST00000511439 SRA1Q9HD15 236 aaKnown RBP6.64□□□□□ -1.35
TOPBP1-208ENST00000511439 LRFN2Q9ULH4 789 aa6.64□□□□□ -1.35
TOPBP1-208ENST00000511439 ZCCHC6Q5VYS8 1495 aaKnown RBP6.64□□□□□ -1.35
TOPBP1-208ENST00000511439 GHRHP01286 108 aa6.63□□□□□ -1.35
TOPBP1-208ENST00000511439 HOXD8P13378 290 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-208ENST00000511439 MLLT1Q03111 559 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-208ENST00000511439 FKBP5Q13451 457 aaPredicted RBP6.63□□□□□ -1.35
TOPBP1-208ENST00000511439 COX20Q5RI15 118 aa6.63□□□□□ -1.35
TOPBP1-208ENST00000511439 CACTIN-AS1Q8N1I8 211 aa6.63□□□□□ -1.35
TOPBP1-208ENST00000511439 LOC102724428A0A0B4J2F2 783 aa6.62□□□□□ -1.35
TOPBP1-208ENST00000511439 SIK1P57059 783 aa6.62□□□□□ -1.35
TOPBP1-208ENST00000511439 C16orf46Q6P387 395 aa6.62□□□□□ -1.35
TOPBP1-208ENST00000511439 MAP4K3Q8IVH8 894 aa6.62□□□□□ -1.35
TOPBP1-208ENST00000511439 SSBP4Q9BWG4 385 aaPredicted RBP6.62□□□□□ -1.35
TOPBP1-208ENST00000511439 ZFP64Q9NPA5 681 aa6.62□□□□□ -1.35
TOPBP1-208ENST00000511439 ZMIZ1Q9ULJ6 1067 aa6.62□□□□□ -1.35
TOPBP1-208ENST00000511439 CADPSQ9ULU8 1353 aa6.61□□□□□ -1.35
TOPBP1-208ENST00000511439 PRMT3O60678 531 aa6.61□□□□□ -1.35
TOPBP1-208ENST00000511439 PTCD1O75127 700 aaKnown RBP6.61□□□□□ -1.35
TOPBP1-208ENST00000511439 ARTNQ5T4W7 220 aa6.61□□□□□ -1.35
TOPBP1-208ENST00000511439 NLRP13Q86W25 1043 aa6.61□□□□□ -1.35
TOPBP1-208ENST00000511439 WFDC12Q8WWY7 111 aa6.61□□□□□ -1.35
TOPBP1-208ENST00000511439 PLD4Q96BZ4 506 aa6.61□□□□□ -1.35
TOPBP1-208ENST00000511439 PRIMPOLQ96LW4 560 aa6.61□□□□□ -1.35
TOPBP1-208ENST00000511439 MMP20O60882 483 aa6.6□□□□□ -1.35
TOPBP1-208ENST00000511439 OCLNQ16625 522 aa6.6□□□□□ -1.35
TOPBP1-208ENST00000511439 HFE2Q6ZVN8 426 aa6.6□□□□□ -1.35
TOPBP1-208ENST00000511439 RETREG2Q8NC44 543 aa6.6□□□□□ -1.35
TOPBP1-208ENST00000511439 STK32AQ8WU08 396 aa6.6□□□□□ -1.35
TOPBP1-208ENST00000511439 PIK3R5Q8WYR1 880 aa6.6□□□□□ -1.35
TOPBP1-208ENST00000511439 MUC3BQ9H195 1237 aa6.6□□□□□ -1.35
TOPBP1-208ENST00000511439 FNDC3AQ9Y2H6 1198 aaKnown RBP6.6□□□□□ -1.35
TOPBP1-208ENST00000511439 USP20Q9Y2K6 914 aa6.6□□□□□ -1.35
TOPBP1-208ENST00000511439 KCNMB2Q9Y691 235 aa6.6□□□□□ -1.35
TOPBP1-208ENST00000511439 IREB2P48200 963 aaKnown RBP6.59□□□□□ -1.35
TOPBP1-208ENST00000511439 TMEM164Q5U3C3 297 aa6.59□□□□□ -1.35
TOPBP1-208ENST00000511439 HOMEZQ8IX15 550 aa6.59□□□□□ -1.35
TOPBP1-208ENST00000511439 MRPL18Q9H0U6 180 aaKnown RBP6.59□□□□□ -1.35
TOPBP1-208ENST00000511439 CXXC1Q9P0U4 656 aaPredicted RBP6.59□□□□□ -1.35
TOPBP1-208ENST00000511439 SYNJ2O15056 1496 aa6.59□□□□□ -1.36
TOPBP1-208ENST00000511439 TMEM88BA6NKF7 163 aa6.58□□□□□ -1.36
TOPBP1-208ENST00000511439 DLL1O00548 723 aa6.58□□□□□ -1.36
TOPBP1-208ENST00000511439 NOS3P29474 1203 aa6.58□□□□□ -1.36
TOPBP1-208ENST00000511439 FAM69CQ0P6D2 419 aa6.58□□□□□ -1.36
TOPBP1-208ENST00000511439 LRP8Q14114 963 aa6.58□□□□□ -1.36
TOPBP1-208ENST00000511439 FOXD4L6Q3SYB3 417 aaPredicted RBP6.58□□□□□ -1.36
TOPBP1-208ENST00000511439 FOXD4L3Q6VB84 417 aaPredicted RBP6.58□□□□□ -1.36
TOPBP1-208ENST00000511439 NBPF11Q86T75 865 aa6.58□□□□□ -1.36
TOPBP1-208ENST00000511439 SLC51AQ86UW1 340 aa6.58□□□□□ -1.36
TOPBP1-208ENST00000511439 ETFBKMTQ8IXQ9 262 aa6.58□□□□□ -1.36
TOPBP1-208ENST00000511439 TMEM130Q8N3G9 435 aa6.58□□□□□ -1.36
TOPBP1-208ENST00000511439 IL22RA1Q8N6P7 574 aa6.58□□□□□ -1.36
TOPBP1-208ENST00000511439 NSUN5Q96P11 429 aaKnown RBP6.58□□□□□ -1.36
TOPBP1-208ENST00000511439 USTQ9Y2C2 406 aa6.58□□□□□ -1.36
TOPBP1-208ENST00000511439 UBAP1LF5GYI3 381 aa6.57□□□□□ -1.36
TOPBP1-208ENST00000511439 J3QW42 95 aa6.57□□□□□ -1.36
TOPBP1-208ENST00000511439 DEAF1O75398 565 aaPredicted RBP6.57□□□□□ -1.36
TOPBP1-208ENST00000511439 GDF6Q6KF10 455 aaPredicted RBP6.57□□□□□ -1.36
TOPBP1-208ENST00000511439 ABTB2Q8N961 1025 aa6.57□□□□□ -1.36
TOPBP1-208ENST00000511439 SPACA7Q96KW9 195 aa6.57□□□□□ -1.36
TOPBP1-208ENST00000511439 AKTIPQ9H8T0 292 aa6.57□□□□□ -1.36
TOPBP1-208ENST00000511439 SPATA31D1Q6ZQQ2 1576 aa6.57□□□□□ -1.36
TOPBP1-208ENST00000511439 CHD1O14646 1710 aa6.56□□□□□ -1.36
TOPBP1-208ENST00000511439 OR13H1Q8NG92 308 aa6.56□□□□□ -1.36
TOPBP1-208ENST00000511439 SAP130Q9H0E3 1048 aa6.56□□□□□ -1.36
TOPBP1-208ENST00000511439 SMARCA4P51532 1647 aa6.56□□□□□ -1.36
TOPBP1-208ENST00000511439 FANCD2Q9BXW9 1451 aa6.55□□□□□ -1.36
TOPBP1-208ENST00000511439 CARNS1A5YM72 827 aa6.55□□□□□ -1.36
TOPBP1-208ENST00000511439 ZAP70P43403 619 aa6.55□□□□□ -1.36
TOPBP1-208ENST00000511439 PDE4CQ08493 712 aa6.55□□□□□ -1.36
TOPBP1-208ENST00000511439 HYAL2Q12891 473 aa6.55□□□□□ -1.36
TOPBP1-208ENST00000511439 TRIP4Q15650 581 aaPredicted RBP6.55□□□□□ -1.36
TOPBP1-208ENST00000511439 TTC39BQ5VTQ0 682 aaPredicted RBP6.55□□□□□ -1.36
TOPBP1-208ENST00000511439 CLP1Q92989 425 aaKnown RBP6.55□□□□□ -1.36
TOPBP1-208ENST00000511439 STIM2Q9P246 746 aa6.55□□□□□ -1.36
TOPBP1-208ENST00000511439 ZNF608Q9ULD9 1512 aaPredicted RBP6.55□□□□□ -1.36
TOPBP1-208ENST00000511439 SMNDC1O75940 238 aaKnown RBP eCLIP6.54□□□□□ -1.36
TOPBP1-208ENST00000511439 RPLP1P05386 114 aaKnown RBP6.54□□□□□ -1.36
TOPBP1-208ENST00000511439 PRR23CQ6ZRP0 262 aa6.54□□□□□ -1.36
TOPBP1-208ENST00000511439 DZIP1LQ8IYY4 767 aaKnown RBP6.54□□□□□ -1.36
TOPBP1-208ENST00000511439 MEGF10Q96KG7 1140 aa6.54□□□□□ -1.36
TOPBP1-208ENST00000511439 MKNK1Q9BUB5 465 aa6.54□□□□□ -1.36
TOPBP1-208ENST00000511439 RNF112Q9ULX5 631 aa6.54□□□□□ -1.36
TOPBP1-208ENST00000511439 PPME1Q9Y570 386 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms