RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 KRTAP1-3Q8IUG1 177 aa7.48□□□□□ -1.21
HMGB3P13-201ENST00000511263 GPR152Q8TDT2 470 aa7.48□□□□□ -1.21
HMGB3P13-201ENST00000511263 UBE2OQ9C0C9 1292 aaKnown RBP7.48□□□□□ -1.21
HMGB3P13-201ENST00000511263 RBSNQ9H1K0 784 aa7.48□□□□□ -1.21
HMGB3P13-201ENST00000511263 H3BRB1 525 aa7.47□□□□□ -1.21
HMGB3P13-201ENST00000511263 NDUFB5O43674 189 aa7.47□□□□□ -1.21
HMGB3P13-201ENST00000511263 LILRB5O75023 590 aa7.47□□□□□ -1.21
HMGB3P13-201ENST00000511263 NEFLP07196 543 aa7.47□□□□□ -1.21
HMGB3P13-201ENST00000511263 TTC39BQ5VTQ0 682 aaPredicted RBP7.47□□□□□ -1.21
HMGB3P13-201ENST00000511263 NUDT8Q8WV74 236 aa7.47□□□□□ -1.21
HMGB3P13-201ENST00000511263 IGFLR1Q9H665 355 aa7.47□□□□□ -1.21
HMGB3P13-201ENST00000511263 TUT1Q9H6E5 874 aaKnown RBP7.47□□□□□ -1.21
HMGB3P13-201ENST00000511263 PLAURQ03405 335 aa7.46□□□□□ -1.22
HMGB3P13-201ENST00000511263 DNM1Q05193 864 aaKnown RBP7.46□□□□□ -1.22
HMGB3P13-201ENST00000511263 PDE3BQ13370 1112 aa7.46□□□□□ -1.22
HMGB3P13-201ENST00000511263 PMEPA1Q969W9 287 aa7.46□□□□□ -1.22
HMGB3P13-201ENST00000511263 CITED4Q96RK1 184 aa7.46□□□□□ -1.22
HMGB3P13-201ENST00000511263 BRPF3Q9ULD4 1205 aa7.46□□□□□ -1.22
HMGB3P13-201ENST00000511263 SLC6A14Q9UN76 642 aa7.46□□□□□ -1.22
HMGB3P13-201ENST00000511263 C9orf172C9J069 976 aa7.45□□□□□ -1.22
HMGB3P13-201ENST00000511263 ELNP15502 786 aa7.45□□□□□ -1.22
HMGB3P13-201ENST00000511263 SOX18P35713 384 aa7.45□□□□□ -1.22
HMGB3P13-201ENST00000511263 ZNF211Q13398 564 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P13-201ENST00000511263 KRT25Q7Z3Z0 450 aa7.45□□□□□ -1.22
HMGB3P13-201ENST00000511263 ZNF438Q7Z4V0 828 aa7.45□□□□□ -1.22
HMGB3P13-201ENST00000511263 EDEM1Q92611 657 aa7.45□□□□□ -1.22
HMGB3P13-201ENST00000511263 NUDT16Q96DE0 195 aaKnown RBP7.45□□□□□ -1.22
HMGB3P13-201ENST00000511263 SPACA7Q96KW9 195 aa7.45□□□□□ -1.22
HMGB3P13-201ENST00000511263 JPH1Q9HDC5 661 aaPredicted RBP7.45□□□□□ -1.22
HMGB3P13-201ENST00000511263 NAGPAQ9UK23 515 aa7.45□□□□□ -1.22
HMGB3P13-201ENST00000511263 KCNMB2Q9Y691 235 aa7.45□□□□□ -1.22
HMGB3P13-201ENST00000511263 SASH3O75995 380 aa7.44□□□□□ -1.22
HMGB3P13-201ENST00000511263 SERPINB4P48594 390 aa7.44□□□□□ -1.22
HMGB3P13-201ENST00000511263 NRLP54845 237 aa7.44□□□□□ -1.22
HMGB3P13-201ENST00000511263 C8orf34Q49A92 452 aa7.44□□□□□ -1.22
HMGB3P13-201ENST00000511263 DHX32Q7L7V1 743 aaKnown RBP7.44□□□□□ -1.22
HMGB3P13-201ENST00000511263 TXNRD3Q86VQ6 643 aa7.44□□□□□ -1.22
HMGB3P13-201ENST00000511263 KRTAP4-12Q9BQ66 201 aa7.44□□□□□ -1.22
HMGB3P13-201ENST00000511263 TLR7Q9NYK1 1049 aaKnown RBP7.44□□□□□ -1.22
HMGB3P13-201ENST00000511263 PDGFAP04085 211 aa7.43□□□□□ -1.22
HMGB3P13-201ENST00000511263 H2AFB1P0C5Y9 115 aa7.43□□□□□ -1.22
HMGB3P13-201ENST00000511263 H2AFB2P0C5Z0 115 aa7.43□□□□□ -1.22
HMGB3P13-201ENST00000511263 TARSP26639 723 aaKnown RBP7.43□□□□□ -1.22
HMGB3P13-201ENST00000511263 SCNN1AP37088 669 aa7.43□□□□□ -1.22
HMGB3P13-201ENST00000511263 AFF1P51825 1210 aaKnown RBP7.43□□□□□ -1.22
HMGB3P13-201ENST00000511263 GPLD1P80108 840 aa7.43□□□□□ -1.22
HMGB3P13-201ENST00000511263 MTMR3Q13615 1198 aa7.43□□□□□ -1.22
HMGB3P13-201ENST00000511263 XKR5Q6UX68 686 aa7.43□□□□□ -1.22
HMGB3P13-201ENST00000511263 HOMEZQ8IX15 550 aa7.43□□□□□ -1.22
HMGB3P13-201ENST00000511263 LENG1Q96BZ8 264 aaPredicted RBP7.43□□□□□ -1.22
HMGB3P13-201ENST00000511263 ANO2Q9NQ90 1003 aa7.43□□□□□ -1.22
HMGB3P13-201ENST00000511263 DNAJB12Q9NXW2 375 aaKnown RBP7.43□□□□□ -1.22
HMGB3P13-201ENST00000511263 ABI2Q9NYB9 513 aaPredicted RBP7.43□□□□□ -1.22
HMGB3P13-201ENST00000511263 BIN2Q9UBW5 565 aaPredicted RBP7.43□□□□□ -1.22
HMGB3P13-201ENST00000511263 ZBTB39O15060 712 aa7.42□□□□□ -1.22
HMGB3P13-201ENST00000511263 GHRHP01286 108 aa7.42□□□□□ -1.22
HMGB3P13-201ENST00000511263 PSAPL1Q6NUJ1 521 aa7.42□□□□□ -1.22
HMGB3P13-201ENST00000511263 ILDR2Q71H61 639 aa7.42□□□□□ -1.22
HMGB3P13-201ENST00000511263 NBPF11Q86T75 865 aa7.42□□□□□ -1.22
HMGB3P13-201ENST00000511263 DMRTC2Q8IXT2 367 aaPredicted RBP7.42□□□□□ -1.22
HMGB3P13-201ENST00000511263 TRPM4Q8TD43 1214 aa7.42□□□□□ -1.22
HMGB3P13-201ENST00000511263 SOWAHDA6NJG2 315 aa7.41□□□□□ -1.22
HMGB3P13-201ENST00000511263 FAM177BA6PVY3 158 aa7.41□□□□□ -1.22
HMGB3P13-201ENST00000511263 NRG1Q02297 640 aaPredicted RBP7.41□□□□□ -1.22
HMGB3P13-201ENST00000511263 HYAL2Q12891 473 aa7.41□□□□□ -1.22
HMGB3P13-201ENST00000511263 ATCAYQ86WG3 371 aa7.41□□□□□ -1.22
HMGB3P13-201ENST00000511263 AEBP1Q8IUX7 1158 aa7.41□□□□□ -1.22
HMGB3P13-201ENST00000511263 CACTIN-AS1Q8N1I8 211 aa7.41□□□□□ -1.22
HMGB3P13-201ENST00000511263 TP53INP1Q96A56 240 aa7.41□□□□□ -1.22
HMGB3P13-201ENST00000511263 SSBP4Q9BWG4 385 aaPredicted RBP7.41□□□□□ -1.22
HMGB3P13-201ENST00000511263 ELP3Q9H9T3 547 aa7.41□□□□□ -1.22
HMGB3P13-201ENST00000511263 FRRS1LQ9P0K9 344 aa7.41□□□□□ -1.22
HMGB3P13-201ENST00000511263 POLIQ9UNA4 740 aa7.41□□□□□ -1.22
HMGB3P13-201ENST00000511263 USP20Q9Y2K6 914 aa7.41□□□□□ -1.22
HMGB3P13-201ENST00000511263 HYAL3O43820 417 aaPredicted RBP7.4□□□□□ -1.22
HMGB3P13-201ENST00000511263 HOXD8P13378 290 aaPredicted RBP7.4□□□□□ -1.22
HMGB3P13-201ENST00000511263 RAC1P63000 192 aa7.4□□□□□ -1.22
HMGB3P13-201ENST00000511263 LRP8Q14114 963 aa7.4□□□□□ -1.22
HMGB3P13-201ENST00000511263 LCE3BQ5TA77 95 aa7.4□□□□□ -1.22
HMGB3P13-201ENST00000511263 ELMSAN1Q6PJG2 1045 aa7.4□□□□□ -1.22
HMGB3P13-201ENST00000511263 FAM35AQ86V20 835 aa7.4□□□□□ -1.22
HMGB3P13-201ENST00000511263 FMR1NBQ8N0W7 255 aaPredicted RBP7.4□□□□□ -1.22
HMGB3P13-201ENST00000511263 TMC1Q8TDI8 760 aa7.4□□□□□ -1.22
HMGB3P13-201ENST00000511263 IVNS1ABPQ9Y6Y0 642 aa7.4□□□□□ -1.22
HMGB3P13-201ENST00000511263 LOC102724428A0A0B4J2F2 783 aa7.39□□□□□ -1.23
HMGB3P13-201ENST00000511263 MMP20O60882 483 aa7.39□□□□□ -1.23
HMGB3P13-201ENST00000511263 RGS9O75916 674 aaPredicted RBP7.39□□□□□ -1.23
HMGB3P13-201ENST00000511263 GRNP28799 593 aaKnown RBP7.39□□□□□ -1.23
HMGB3P13-201ENST00000511263 SIK1P57059 783 aa7.39□□□□□ -1.23
HMGB3P13-201ENST00000511263 TRIP4Q15650 581 aaPredicted RBP7.39□□□□□ -1.23
HMGB3P13-201ENST00000511263 OR13H1Q8NG92 308 aa7.39□□□□□ -1.23
HMGB3P13-201ENST00000511263 DCAF11Q8TEB1 546 aa7.39□□□□□ -1.23
HMGB3P13-201ENST00000511263 SNX29Q8TEQ0 813 aa7.39□□□□□ -1.23
HMGB3P13-201ENST00000511263 DMRTB1Q96MA1 342 aa7.39□□□□□ -1.23
HMGB3P13-201ENST00000511263 ZFATQ9P243 1243 aa7.39□□□□□ -1.23
HMGB3P13-201ENST00000511263 USP21Q9UK80 565 aa7.39□□□□□ -1.23
HMGB3P13-201ENST00000511263 CES1P23141 567 aa7.38□□□□□ -1.23
HMGB3P13-201ENST00000511263 FAM26DQ5JW98 314 aa7.38□□□□□ -1.23
HMGB3P13-201ENST00000511263 FZD6O60353 706 aa7.37□□□□□ -1.23
HMGB3P13-201ENST00000511263 PHACTR2O75167 634 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms