RNA–Protein interactions for RNA: ENST00000511255.1

SMAD1-210, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-210ENST00000511255 KCNQ3O43525 872 aa10.1□□□□□ -0.79
SMAD1-210ENST00000511255 RPS6KA4O75676 772 aa10.1□□□□□ -0.79
SMAD1-210ENST00000511255 RFC4P35249 363 aa10.1□□□□□ -0.79
SMAD1-210ENST00000511255 GJA5P36382 358 aa10.1□□□□□ -0.79
SMAD1-210ENST00000511255 RIPK4P57078 832 aa10.1□□□□□ -0.79
SMAD1-210ENST00000511255 DIXDC1Q155Q3 683 aa10.1□□□□□ -0.79
SMAD1-210ENST00000511255 ZNF496Q96IT1 587 aaPredicted RBP10.1□□□□□ -0.79
SMAD1-210ENST00000511255 FHDC1Q9C0D6 1143 aaPredicted RBP10.1□□□□□ -0.79
SMAD1-210ENST00000511255 CCDC87Q9NVE4 849 aa10.1□□□□□ -0.79
SMAD1-210ENST00000511255 ADAMTS8Q9UP79 889 aa10.1□□□□□ -0.79
SMAD1-210ENST00000511255 RRP7AQ9Y3A4 280 aaKnown RBP10.1□□□□□ -0.79
SMAD1-210ENST00000511255 KCPQ6ZWJ8 1503 aa10.1□□□□□ -0.79
SMAD1-210ENST00000511255 UBR3Q6ZT12 1888 aa10.09□□□□□ -0.79
SMAD1-210ENST00000511255 STARD3NLO95772 234 aa10.09□□□□□ -0.79
SMAD1-210ENST00000511255 CYP19A1P11511 503 aaPredicted RBP10.09□□□□□ -0.79
SMAD1-210ENST00000511255 MMP16P51512 607 aa10.09□□□□□ -0.79
SMAD1-210ENST00000511255 LMOD3Q0VAK6 560 aa10.09□□□□□ -0.79
SMAD1-210ENST00000511255 TAF7Q15545 349 aaPredicted RBP10.09□□□□□ -0.79
SMAD1-210ENST00000511255 RIC3Q7Z5B4 369 aa10.09□□□□□ -0.79
SMAD1-210ENST00000511255 RUNDC1Q96C34 613 aa10.09□□□□□ -0.79
SMAD1-210ENST00000511255 THUMPD2Q9BTF0 503 aaKnown RBP10.09□□□□□ -0.79
SMAD1-210ENST00000511255 MIS18AQ9NYP9 233 aa10.09□□□□□ -0.79
SMAD1-210ENST00000511255 ZNF330Q9Y3S2 320 aaPredicted RBP10.09□□□□□ -0.79
SMAD1-210ENST00000511255 HEG1Q9ULI3 1381 aa10.09□□□□□ -0.79
SMAD1-210ENST00000511255 ZNF831Q5JPB2 1677 aa10.09□□□□□ -0.79
SMAD1-210ENST00000511255 TJP1Q07157 1748 aa10.08□□□□□ -0.8
SMAD1-210ENST00000511255 POTECB2RU33 542 aa10.08□□□□□ -0.8
SMAD1-210ENST00000511255 CANXP27824 592 aaKnown RBP10.08□□□□□ -0.8
SMAD1-210ENST00000511255 TMPOP42166 694 aaKnown RBP10.08□□□□□ -0.8
SMAD1-210ENST00000511255 INTS5Q6P9B9 1019 aaKnown RBP10.08□□□□□ -0.8
SMAD1-210ENST00000511255 TRIM67Q6ZTA4 783 aa10.08□□□□□ -0.8
SMAD1-210ENST00000511255 NPM2Q86SE8 214 aaKnown RBP10.08□□□□□ -0.8
SMAD1-210ENST00000511255 PNISRQ8TF01 805 aaKnown RBP10.08□□□□□ -0.8
SMAD1-210ENST00000511255 SYT17Q9BSW7 474 aa10.08□□□□□ -0.8
SMAD1-210ENST00000511255 TEX13AQ9BXU3 409 aaPredicted RBP10.08□□□□□ -0.8
SMAD1-210ENST00000511255 MRS2Q9HD23 443 aa10.08□□□□□ -0.8
SMAD1-210ENST00000511255 LIMD1Q9UGP4 676 aa10.08□□□□□ -0.8
SMAD1-210ENST00000511255 ZBTB1Q9Y2K1 713 aa10.08□□□□□ -0.8
SMAD1-210ENST00000511255 COL5A3P25940 1745 aaPredicted RBP10.07□□□□□ -0.8
SMAD1-210ENST00000511255 CCDC184Q52MB2 194 aa10.07□□□□□ -0.8
SMAD1-210ENST00000511255 LIAT1Q6ZQX7 453 aa10.07□□□□□ -0.8
SMAD1-210ENST00000511255 RETREG3Q86VR2 466 aa10.07□□□□□ -0.8
SMAD1-210ENST00000511255 SRP68Q9UHB9 627 aaKnown RBP10.07□□□□□ -0.8
SMAD1-210ENST00000511255 SIPA1L3O60292 1781 aaPredicted RBP10.06□□□□□ -0.8
SMAD1-210ENST00000511255 COL15A1P39059 1388 aa10.06□□□□□ -0.8
SMAD1-210ENST00000511255 DLG5Q8TDM6 1919 aa10.06□□□□□ -0.8
SMAD1-210ENST00000511255 C6orf229H3BNL8 230 aa10.06□□□□□ -0.8
SMAD1-210ENST00000511255 DXOO77932 396 aaKnown RBP10.06□□□□□ -0.8
SMAD1-210ENST00000511255 MMP10P09238 476 aa10.06□□□□□ -0.8
SMAD1-210ENST00000511255 SNRPA1P09661 255 aaKnown RBP10.06□□□□□ -0.8
SMAD1-210ENST00000511255 BRPF1P55201 1214 aaPredicted RBP10.06□□□□□ -0.8
SMAD1-210ENST00000511255 MYH14Q7Z406 1995 aaKnown RBP10.06□□□□□ -0.8
SMAD1-210ENST00000511255 UBR2Q8IWV8 1755 aa10.06□□□□□ -0.8
SMAD1-210ENST00000511255 SOS1Q07889 1333 aaPredicted RBP10.06□□□□□ -0.8
SMAD1-210ENST00000511255 PRAMEF22A3QJZ6 481 aa10.05□□□□□ -0.8
SMAD1-210ENST00000511255 A1BGP04217 495 aa10.05□□□□□ -0.8
SMAD1-210ENST00000511255 GYS1P13807 737 aa10.05□□□□□ -0.8
SMAD1-210ENST00000511255 SLC19A1P41440 591 aa10.05□□□□□ -0.8
SMAD1-210ENST00000511255 NLGN1Q8N2Q7 840 aa10.05□□□□□ -0.8
SMAD1-210ENST00000511255 TSPYL4Q9UJ04 414 aa10.05□□□□□ -0.8
SMAD1-210ENST00000511255 FCF1Q9Y324 198 aaKnown RBP10.05□□□□□ -0.8
SMAD1-210ENST00000511255 LAS1LQ9Y4W2 734 aaKnown RBP10.05□□□□□ -0.8
SMAD1-210ENST00000511255 USP16Q9Y5T5 823 aa10.05□□□□□ -0.8
SMAD1-210ENST00000511255 USP42Q9H9J4 1324 aaKnown RBP10.05□□□□□ -0.8
SMAD1-210ENST00000511255 CICQ96RK0 1608 aaPredicted RBP10.04□□□□□ -0.8
SMAD1-210ENST00000511255 A0A087WZG4 1122 aa10.04□□□□□ -0.8
SMAD1-210ENST00000511255 APAF1O14727 1248 aa10.04□□□□□ -0.8
SMAD1-210ENST00000511255 PIP4K2AP48426 406 aaPredicted RBP10.04□□□□□ -0.8
SMAD1-210ENST00000511255 LCE2AQ5TA79 106 aaPredicted RBP10.04□□□□□ -0.8
SMAD1-210ENST00000511255 USPL1Q5W0Q7 1092 aa10.04□□□□□ -0.8
SMAD1-210ENST00000511255 NLGN2Q8NFZ4 835 aa10.04□□□□□ -0.8
SMAD1-210ENST00000511255 POLR3EQ9NVU0 708 aa10.04□□□□□ -0.8
SMAD1-210ENST00000511255 PARP3Q9Y6F1 533 aa10.04□□□□□ -0.8
SMAD1-210ENST00000511255 SENP3-EIF4A1A0A087X0R7 540 aa10.03□□□□□ -0.8
SMAD1-210ENST00000511255 EIF4A1P60842 406 aaKnown RBP10.03□□□□□ -0.8
SMAD1-210ENST00000511255 MTMR2Q13614 643 aa10.03□□□□□ -0.8
SMAD1-210ENST00000511255 QPCTQ16769 361 aa10.03□□□□□ -0.8
SMAD1-210ENST00000511255 DDRGK1Q96HY6 314 aa10.03□□□□□ -0.8
SMAD1-210ENST00000511255 IL6STP40189 918 aaPredicted RBP10.02□□□□□ -0.81
SMAD1-210ENST00000511255 EIF5P55010 431 aaKnown RBP10.02□□□□□ -0.81
SMAD1-210ENST00000511255 GPR162Q16538 588 aa10.02□□□□□ -0.81
SMAD1-210ENST00000511255 CSPP1Q1MSJ5 1256 aa10.02□□□□□ -0.81
SMAD1-210ENST00000511255 TUSC1Q2TAM9 212 aa10.02□□□□□ -0.81
SMAD1-210ENST00000511255 NARFQ9UHQ1 456 aa10.02□□□□□ -0.81
SMAD1-210ENST00000511255 TBC1D2BQ9UPU7 963 aa10.02□□□□□ -0.81
SMAD1-210ENST00000511255 C4AP0C0L4 1744 aa10.02□□□□□ -0.81
SMAD1-210ENST00000511255 COL24A1Q17RW2 1714 aa10.02□□□□□ -0.81
SMAD1-210ENST00000511255 GIGYF1O75420 1035 aaPredicted RBP10.01□□□□□ -0.81
SMAD1-210ENST00000511255 JUNDP17535 347 aa10.01□□□□□ -0.81
SMAD1-210ENST00000511255 SPRYD7Q5W111 196 aa10.01□□□□□ -0.81
SMAD1-210ENST00000511255 BICDL1Q6ZP65 573 aa10.01□□□□□ -0.81
SMAD1-210ENST00000511255 DZIP3Q86Y13 1208 aaKnown RBP10.01□□□□□ -0.81
SMAD1-210ENST00000511255 FAM9BQ8IZU0 186 aa10.01□□□□□ -0.81
SMAD1-210ENST00000511255 PRR7Q8TB68 274 aa10.01□□□□□ -0.81
SMAD1-210ENST00000511255 WWC3Q9ULE0 1092 aa10.01□□□□□ -0.81
SMAD1-210ENST00000511255 CD2APQ9Y5K6 639 aa10.01□□□□□ -0.81
SMAD1-210ENST00000511255 CFAP99D6REC4 459 aa10□□□□□ -0.81
SMAD1-210ENST00000511255 LILRB3O75022 631 aa10□□□□□ -0.81
SMAD1-210ENST00000511255 EIF2S2P20042 333 aaKnown RBP10□□□□□ -0.81
SMAD1-210ENST00000511255 SKIV2LQ15477 1246 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms