RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 FKBP5Q13451 457 aaPredicted RBP9.57□□□□□ -0.88
GYPB-212ENST00000511198 RAB44Q7Z6P3 723 aaPredicted RBP9.57□□□□□ -0.88
GYPB-212ENST00000511198 PBXIP1Q96AQ6 731 aa9.57□□□□□ -0.88
GYPB-212ENST00000511198 MYO19Q96H55 970 aa9.57□□□□□ -0.88
GYPB-212ENST00000511198 CARMIL1Q5VZK9 1371 aa9.57□□□□□ -0.88
GYPB-212ENST00000511198 PLA2R1Q13018 1463 aa9.56□□□□□ -0.88
GYPB-212ENST00000511198 ELOA3CA0A087WX78 387 aaPredicted RBP9.56□□□□□ -0.88
GYPB-212ENST00000511198 ELOA3DA6NLF2 546 aaPredicted RBP9.56□□□□□ -0.88
GYPB-212ENST00000511198 ELOA3BQ3SY89 546 aa9.56□□□□□ -0.88
GYPB-212ENST00000511198 ELOA3Q8NG57 546 aa9.56□□□□□ -0.88
GYPB-212ENST00000511198 DCAF5Q96JK2 942 aa9.56□□□□□ -0.88
GYPB-212ENST00000511198 ADARB2-AS1A8MUL3 147 aa9.55□□□□□ -0.88
GYPB-212ENST00000511198 PRMT3O60678 531 aa9.55□□□□□ -0.88
GYPB-212ENST00000511198 GRNP28799 593 aaKnown RBP9.55□□□□□ -0.88
GYPB-212ENST00000511198 DGKZQ13574 1117 aa9.55□□□□□ -0.88
GYPB-212ENST00000511198 TMEM164Q5U3C3 297 aa9.55□□□□□ -0.88
GYPB-212ENST00000511198 TNFRSF25Q93038 417 aa9.55□□□□□ -0.88
GYPB-212ENST00000511198 LRFN2Q9ULH4 789 aa9.55□□□□□ -0.88
GYPB-212ENST00000511198 COL8A1P27658 744 aa9.54□□□□□ -0.88
GYPB-212ENST00000511198 INPP5BP32019 993 aa9.54□□□□□ -0.88
GYPB-212ENST00000511198 VTI1AQ96AJ9 217 aa9.54□□□□□ -0.88
GYPB-212ENST00000511198 C1orf115Q9H7X2 142 aa9.54□□□□□ -0.88
GYPB-212ENST00000511198 C11orf91Q3C1V1 193 aa9.53□□□□□ -0.88
GYPB-212ENST00000511198 SUV39H2Q9H5I1 410 aa9.53□□□□□ -0.88
GYPB-212ENST00000511198 LRRC7Q96NW7 1537 aa9.52□□□□□ -0.88
GYPB-212ENST00000511198 ITGB2P05107 769 aa9.52□□□□□ -0.89
GYPB-212ENST00000511198 NEUROD1Q13562 356 aa9.52□□□□□ -0.89
GYPB-212ENST00000511198 CCDC82Q8N4S0 544 aa9.52□□□□□ -0.89
GYPB-212ENST00000511198 GSX2Q9BZM3 304 aa9.52□□□□□ -0.89
GYPB-212ENST00000511198 SLAIN2Q9P270 581 aa9.52□□□□□ -0.89
GYPB-212ENST00000511198 VWDEQ8N2E2 1590 aa9.51□□□□□ -0.89
GYPB-212ENST00000511198 GNB5O14775 395 aa9.51□□□□□ -0.89
GYPB-212ENST00000511198 ALAS2P22557 587 aa9.51□□□□□ -0.89
GYPB-212ENST00000511198 IDH3AP50213 366 aa9.51□□□□□ -0.89
GYPB-212ENST00000511198 COX20Q5RI15 118 aa9.51□□□□□ -0.89
GYPB-212ENST00000511198 BHMTQ93088 406 aa9.51□□□□□ -0.89
GYPB-212ENST00000511198 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.51□□□□□ -0.892e-23■■■■■ 397.5
GYPB-212ENST00000511198 CXXC1Q9P0U4 656 aaPredicted RBP9.51□□□□□ -0.89
GYPB-212ENST00000511198 STARD13Q9Y3M8 1113 aa9.51□□□□□ -0.89
GYPB-212ENST00000511198 NPATQ14207 1427 aa9.5□□□□□ -0.89
GYPB-212ENST00000511198 MICAL2O94851 1124 aa9.5□□□□□ -0.89
GYPB-212ENST00000511198 CAPN12Q6ZSI9 719 aa9.5□□□□□ -0.89
GYPB-212ENST00000511198 CLP1Q92989 425 aaKnown RBP9.5□□□□□ -0.89
GYPB-212ENST00000511198 SUPT6HQ7KZ85 1726 aaKnown RBP9.49□□□□□ -0.89
GYPB-212ENST00000511198 ADH7P40394 386 aa9.49□□□□□ -0.89
GYPB-212ENST00000511198 PLA2G4EQ3MJ16 856 aa9.49□□□□□ -0.89
GYPB-212ENST00000511198 C14orf37Q86TY3 774 aa9.49□□□□□ -0.89
GYPB-212ENST00000511198 COL26A1Q96A83 441 aa9.49□□□□□ -0.89
GYPB-212ENST00000511198 SAP130Q9H0E3 1048 aa9.49□□□□□ -0.89
GYPB-212ENST00000511198 EFCC1Q9HA90 598 aa9.49□□□□□ -0.89
GYPB-212ENST00000511198 KIF27Q86VH2 1401 aa9.48□□□□□ -0.89
GYPB-212ENST00000511198 SCAPERQ9BY12 1400 aa9.48□□□□□ -0.89
GYPB-212ENST00000511198 KRBA1A5PL33 1030 aa9.48□□□□□ -0.89
GYPB-212ENST00000511198 OPLAHO14841 1288 aa9.48□□□□□ -0.89
GYPB-212ENST00000511198 CCINQ13939 588 aa9.48□□□□□ -0.89
GYPB-212ENST00000511198 GPAT2Q6NUI2 795 aa9.48□□□□□ -0.89
GYPB-212ENST00000511198 TRIM11Q96F44 468 aa9.48□□□□□ -0.89
GYPB-212ENST00000511198 IFT43Q96FT9 208 aa9.48□□□□□ -0.89
GYPB-212ENST00000511198 ZNF142P52746 1687 aaPredicted RBP9.48□□□□□ -0.89
GYPB-212ENST00000511198 NEURL4Q96JN8 1562 aa9.47□□□□□ -0.89
GYPB-212ENST00000511198 CFAP74Q9C0B2 1584 aa9.47□□□□□ -0.89
GYPB-212ENST00000511198 PIK3R2O00459 728 aa9.47□□□□□ -0.89
GYPB-212ENST00000511198 EPB42P16452 691 aa9.47□□□□□ -0.89
GYPB-212ENST00000511198 ARSDP51689 593 aa9.47□□□□□ -0.89
GYPB-212ENST00000511198 COL9A3Q14050 684 aaPredicted RBP9.47□□□□□ -0.89
GYPB-212ENST00000511198 ALYREFQ86V81 257 aaKnown RBP9.47□□□□□ -0.89
GYPB-212ENST00000511198 CEP170BQ9Y4F5 1589 aaPredicted RBP9.46□□□□□ -0.89
GYPB-212ENST00000511198 STRCP1A6NGW2 1772 aa9.46□□□□□ -0.9
GYPB-212ENST00000511198 RXRBP28702 533 aa9.46□□□□□ -0.9
GYPB-212ENST00000511198 MICALL1Q8N3F8 863 aa9.46□□□□□ -0.9
GYPB-212ENST00000511198 MKNK1Q9BUB5 465 aa9.46□□□□□ -0.9
GYPB-212ENST00000511198 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.46□□□□□ -0.9
GYPB-212ENST00000511198 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.46□□□□□ -0.9
GYPB-212ENST00000511198 M0R082 166 aa9.45□□□□□ -0.9
GYPB-212ENST00000511198 IGHA1P01876 353 aa9.45□□□□□ -0.9
GYPB-212ENST00000511198 ALBP02768 609 aa9.45□□□□□ -0.9
GYPB-212ENST00000511198 NFKB1P19838 968 aa9.45□□□□□ -0.9
GYPB-212ENST00000511198 FAM26DQ5JW98 314 aa9.45□□□□□ -0.9
GYPB-212ENST00000511198 C16orf46Q6P387 395 aa9.45□□□□□ -0.9
GYPB-212ENST00000511198 C20orf204Q6ZNR8 217 aa9.45□□□□□ -0.9
GYPB-212ENST00000511198 C8orf86Q6ZUL3 223 aa9.45□□□□□ -0.9
GYPB-212ENST00000511198 TREML1Q86YW5 311 aa9.45□□□□□ -0.9
GYPB-212ENST00000511198 ZNF417Q8TAU3 575 aa9.45□□□□□ -0.9
GYPB-212ENST00000511198 ZNF587Q96SQ5 575 aaPredicted RBP9.45□□□□□ -0.9
GYPB-212ENST00000511198 C11orf16Q9NQ32 467 aa9.45□□□□□ -0.9
GYPB-212ENST00000511198 ZFATQ9P243 1243 aa9.45□□□□□ -0.9
GYPB-212ENST00000511198 ZMYM3Q14202 1370 aa9.45□□□□□ -0.9
GYPB-212ENST00000511198 MYO3AQ8NEV4 1616 aa9.45□□□□□ -0.9
GYPB-212ENST00000511198 RNF17Q9BXT8 1623 aaKnown RBP9.45□□□□□ -0.9
GYPB-212ENST00000511198 ETFBKMTQ8IXQ9 262 aa9.44□□□□□ -0.9
GYPB-212ENST00000511198 PNMA5Q96PV4 448 aa9.44□□□□□ -0.9
GYPB-212ENST00000511198 PLVAPQ9BX97 442 aa9.44□□□□□ -0.9
GYPB-212ENST00000511198 UBE2OQ9C0C9 1292 aaKnown RBP9.44□□□□□ -0.9
GYPB-212ENST00000511198 PRDM6Q9NQX0 595 aa9.44□□□□□ -0.9
GYPB-212ENST00000511198 NOP53Q9NZM5 478 aaKnown RBP9.44□□□□□ -0.9
GYPB-212ENST00000511198 USP20Q9Y2K6 914 aa9.44□□□□□ -0.9
GYPB-212ENST00000511198 FAM135BQ49AJ0 1406 aa9.44□□□□□ -0.9
GYPB-212ENST00000511198 AGLP35573 1532 aa9.44□□□□□ -0.9
GYPB-212ENST00000511198 TNFRSF10BO14763 440 aa9.43□□□□□ -0.9
GYPB-212ENST00000511198 NAA30Q147X3 362 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms