RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 ARIH1Q9Y4X5 557 aaPredicted RBP6.82□□□□□ -1.32
PROM1-211ENST00000511153 TNRC6CQ9HCJ0 1690 aaKnown RBP6.82□□□□□ -1.32
PROM1-211ENST00000511153 N4BP2Q86UW6 1770 aaPredicted RBP6.82□□□□□ -1.32
PROM1-211ENST00000511153 CACNA1SQ13698 1873 aa6.82□□□□□ -1.32
PROM1-211ENST00000511153 TESPA1A2RU30 521 aaPredicted RBP6.82□□□□□ -1.32
PROM1-211ENST00000511153 MAP3K9P80192 1104 aa6.82□□□□□ -1.32
PROM1-211ENST00000511153 EPHA10Q5JZY3 1008 aa6.82□□□□□ -1.32
PROM1-211ENST00000511153 LINS1Q8NG48 757 aa6.82□□□□□ -1.32
PROM1-211ENST00000511153 EXOC6Q8TAG9 804 aa6.82□□□□□ -1.32
PROM1-211ENST00000511153 OXER1Q8TDS5 423 aa6.82□□□□□ -1.32
PROM1-211ENST00000511153 ZNF622Q969S3 477 aaKnown RBP eCLIP6.82□□□□□ -1.32
PROM1-211ENST00000511153 OTUD5Q96G74 571 aa6.82□□□□□ -1.32
PROM1-211ENST00000511153 SUCLG2Q96I99 432 aa6.82□□□□□ -1.32
PROM1-211ENST00000511153 CHMP4AQ9BY43 222 aa6.82□□□□□ -1.32
PROM1-211ENST00000511153 FHDC1Q9C0D6 1143 aaPredicted RBP6.82□□□□□ -1.32
PROM1-211ENST00000511153 ABCC4O15439 1325 aa6.82□□□□□ -1.32
PROM1-211ENST00000511153 ANKRD31Q8N7Z5 1873 aa6.81□□□□□ -1.32
PROM1-211ENST00000511153 ATP10DQ9P241 1426 aa6.81□□□□□ -1.32
PROM1-211ENST00000511153 SH3TC1Q8TE82 1336 aa6.81□□□□□ -1.32
PROM1-211ENST00000511153 IRS4O14654 1257 aaPredicted RBP6.81□□□□□ -1.32
PROM1-211ENST00000511153 ST5P78524 1137 aa6.81□□□□□ -1.32
PROM1-211ENST00000511153 HSP90AB3PQ58FF7 597 aa6.81□□□□□ -1.32
PROM1-211ENST00000511153 OLFM4Q6UX06 510 aa6.81□□□□□ -1.32
PROM1-211ENST00000511153 CLEC4GQ6UXB4 293 aa6.81□□□□□ -1.32
PROM1-211ENST00000511153 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.81□□□□□ -1.32
PROM1-211ENST00000511153 PPP1R42Q7Z4L9 355 aa6.81□□□□□ -1.32
PROM1-211ENST00000511153 C2CD5Q86YS7 1000 aa6.81□□□□□ -1.32
PROM1-211ENST00000511153 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.81□□□□□ -1.32
PROM1-211ENST00000511153 LRRFIP2Q9Y608 721 aaKnown RBP6.81□□□□□ -1.32
PROM1-211ENST00000511153 SPEF2Q9C093 1822 aa6.8□□□□□ -1.32
PROM1-211ENST00000511153 COL24A1Q17RW2 1714 aa6.8□□□□□ -1.32
PROM1-211ENST00000511153 COL4A1P02462 1669 aa6.8□□□□□ -1.32
PROM1-211ENST00000511153 GRM8O00222 908 aa6.8□□□□□ -1.32
PROM1-211ENST00000511153 UBTFL1P0CB47 393 aaPredicted RBP6.8□□□□□ -1.32
PROM1-211ENST00000511153 DPEP1P16444 411 aa6.8□□□□□ -1.32
PROM1-211ENST00000511153 CCT4P50991 539 aaKnown RBP6.8□□□□□ -1.32
PROM1-211ENST00000511153 POTEGQ6S5H5 508 aa6.8□□□□□ -1.32
PROM1-211ENST00000511153 TPTE2Q6XPS3 522 aa6.8□□□□□ -1.32
PROM1-211ENST00000511153 CCDC191Q8NCU4 936 aa6.8□□□□□ -1.32
PROM1-211ENST00000511153 KLHDC4Q8TBB5 520 aa6.8□□□□□ -1.32
PROM1-211ENST00000511153 SLC16A10Q8TF71 515 aa6.8□□□□□ -1.32
PROM1-211ENST00000511153 KHSRPQ92945 711 aaKnown RBP eCLIP6.8□□□□□ -1.32
PROM1-211ENST00000511153 ZNF594Q96JF6 807 aaPredicted RBP6.8□□□□□ -1.32
PROM1-211ENST00000511153 USP44Q9H0E7 712 aa6.8□□□□□ -1.32
PROM1-211ENST00000511153 LAMB2P55268 1798 aa6.8□□□□□ -1.32
PROM1-211ENST00000511153 DDX60Q8IY21 1712 aaKnown RBP6.8□□□□□ -1.32
PROM1-211ENST00000511153 H7C1W4 665 aa6.79□□□□□ -1.32
PROM1-211ENST00000511153 APBB1O00213 710 aa6.79□□□□□ -1.32
PROM1-211ENST00000511153 PCCAP05165 728 aaPredicted RBP6.79□□□□□ -1.32
PROM1-211ENST00000511153 HMGB2P26583 209 aaKnown RBP6.79□□□□□ -1.32
PROM1-211ENST00000511153 CASP7P55210 303 aa6.79□□□□□ -1.32
PROM1-211ENST00000511153 MVPQ14764 893 aaKnown RBP6.79□□□□□ -1.32
PROM1-211ENST00000511153 PARP10Q53GL7 1025 aa6.79□□□□□ -1.32
PROM1-211ENST00000511153 INTS3Q68E01 1043 aaKnown RBP6.79□□□□□ -1.32
PROM1-211ENST00000511153 HOMEZQ8IX15 550 aa6.79□□□□□ -1.32
PROM1-211ENST00000511153 ZBTB38Q8NAP3 1195 aaPredicted RBP6.79□□□□□ -1.32
PROM1-211ENST00000511153 ARHGAP45Q92619 1136 aa6.79□□□□□ -1.32
PROM1-211ENST00000511153 KAZALD1Q96I82 304 aa6.79□□□□□ -1.32
PROM1-211ENST00000511153 BICC1Q9H694 974 aaKnown RBP6.79□□□□□ -1.32
PROM1-211ENST00000511153 GREM2Q9H772 168 aa6.79□□□□□ -1.32
PROM1-211ENST00000511153 SEC31BQ9NQW1 1179 aa6.79□□□□□ -1.32
PROM1-211ENST00000511153 COL11A2P13942 1736 aaPredicted RBP6.79□□□□□ -1.32
PROM1-211ENST00000511153 ALDH1L1O75891 902 aa6.78□□□□□ -1.32
PROM1-211ENST00000511153 HOXB3P14651 431 aaPredicted RBP6.78□□□□□ -1.32
PROM1-211ENST00000511153 BRPF1P55201 1214 aaPredicted RBP6.78□□□□□ -1.32
PROM1-211ENST00000511153 FAM161AQ3B820 660 aa6.78□□□□□ -1.32
PROM1-211ENST00000511153 LMBR1LQ6UX01 489 aa6.78□□□□□ -1.32
PROM1-211ENST00000511153 RPGRQ92834 1020 aaKnown RBP6.78□□□□□ -1.32
PROM1-211ENST00000511153 NYXQ9GZU5 481 aa6.78□□□□□ -1.32
PROM1-211ENST00000511153 SIL1Q9H173 461 aa6.78□□□□□ -1.32
PROM1-211ENST00000511153 SCUBE2Q9NQ36 999 aa6.78□□□□□ -1.32
PROM1-211ENST00000511153 FOXO4P98177 505 aa6.78□□□□□ -1.32
PROM1-211ENST00000511153 PTCD2Q8WV60 388 aaKnown RBP6.78□□□□□ -1.32
PROM1-211ENST00000511153 DDX12PQ92771 950 aa6.78□□□□□ -1.32
PROM1-211ENST00000511153 NLRP3Q96P20 1036 aa6.78□□□□□ -1.32
PROM1-211ENST00000511153 GPR101Q96P66 508 aaPredicted RBP6.78□□□□□ -1.32
PROM1-211ENST00000511153 PA2G4Q9UQ80 394 aaKnown RBP6.78□□□□□ -1.32
PROM1-211ENST00000511153 PNMA6EA0A0J9YXQ4 647 aa6.77□□□□□ -1.33
PROM1-211ENST00000511153 GRXCR2A6NFK2 248 aa6.77□□□□□ -1.33
PROM1-211ENST00000511153 H0YIN7 160 aa6.77□□□□□ -1.33
PROM1-211ENST00000511153 ZBTB7BO15156 539 aaPredicted RBP6.77□□□□□ -1.33
PROM1-211ENST00000511153 EVI5O60447 810 aa6.77□□□□□ -1.33
PROM1-211ENST00000511153 PDE8AO60658 829 aa6.77□□□□□ -1.33
PROM1-211ENST00000511153 CTSWP56202 376 aa6.77□□□□□ -1.33
PROM1-211ENST00000511153 TRIM28Q13263 835 aaKnown RBP6.77□□□□□ -1.33
PROM1-211ENST00000511153 TAF7LQ5H9L4 462 aa6.77□□□□□ -1.33
PROM1-211ENST00000511153 RBM26Q5T8P6 1007 aaKnown RBP6.77□□□□□ -1.33
PROM1-211ENST00000511153 ANKRD44Q8N8A2 993 aa6.77□□□□□ -1.33
PROM1-211ENST00000511153 HELBQ8NG08 1087 aaPredicted RBP6.77□□□□□ -1.33
PROM1-211ENST00000511153 CELF1Q92879 486 aaKnown RBP6.77□□□□□ -1.33
PROM1-211ENST00000511153 SYT17Q9BSW7 474 aa6.77□□□□□ -1.33
PROM1-211ENST00000511153 BRIP1Q9BX63 1249 aa6.77□□□□□ -1.33
PROM1-211ENST00000511153 BCS1LQ9Y276 419 aa6.77□□□□□ -1.33
PROM1-211ENST00000511153 PCDHGA4Q9Y5G9 962 aa6.77□□□□□ -1.33
PROM1-211ENST00000511153 NRXN2Q9P2S2 1712 aa6.77□□□□□ -1.33
PROM1-211ENST00000511153 PXDNLA1KZ92 1463 aa6.77□□□□□ -1.33
PROM1-211ENST00000511153 MYH3P11055 1940 aa6.77□□□□□ -1.33
PROM1-211ENST00000511153 C10orf71Q711Q0 1435 aa6.77□□□□□ -1.33
PROM1-211ENST00000511153 SLX4Q8IY92 1834 aa6.76□□□□□ -1.33
PROM1-211ENST00000511153 WTIPA6NIX2 430 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms