RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 CNBD1Q8NA66 436 aa11.26□□□□□ -0.61
PDPN-209ENST00000510906 BRIP1Q9BX63 1249 aa11.26□□□□□ -0.61
PDPN-209ENST00000510906 KIAA1468Q9P260 1216 aa11.26□□□□□ -0.61
PDPN-209ENST00000510906 LIMD1Q9UGP4 676 aa11.26□□□□□ -0.61
PDPN-209ENST00000510906 ZNF652Q9Y2D9 606 aa11.26□□□□□ -0.61
PDPN-209ENST00000510906 BRCA1P38398 1863 aaKnown RBP11.25□□□□□ -0.61
PDPN-209ENST00000510906 DDX11L8A8MPP1 907 aa11.25□□□□□ -0.61
PDPN-209ENST00000510906 ARHGAP33O14559 1287 aa11.25□□□□□ -0.61
PDPN-209ENST00000510906 MYL6BP14649 208 aa11.25□□□□□ -0.61
PDPN-209ENST00000510906 GJA5P36382 358 aa11.25□□□□□ -0.61
PDPN-209ENST00000510906 PSEN2P49810 448 aa11.25□□□□□ -0.61
PDPN-209ENST00000510906 HLFQ16534 295 aa11.25□□□□□ -0.61
PDPN-209ENST00000510906 C9orf131Q5VYM1 1079 aa11.25□□□□□ -0.61
PDPN-209ENST00000510906 PPP2R2DQ66LE6 453 aa11.25□□□□□ -0.61
PDPN-209ENST00000510906 TTLL7Q6ZT98 887 aa11.25□□□□□ -0.61
PDPN-209ENST00000510906 TTLL6Q8N841 843 aa11.25□□□□□ -0.61
PDPN-209ENST00000510906 RABGEF1Q9UJ41 708 aa11.25□□□□□ -0.61
PDPN-209ENST00000510906 NIP7Q9Y221 180 aaKnown RBP eCLIP11.25□□□□□ -0.61
PDPN-209ENST00000510906 BCORQ6W2J9 1755 aa11.24□□□□□ -0.61
PDPN-209ENST00000510906 A6NJR5 290 aa11.24□□□□□ -0.61
PDPN-209ENST00000510906 FAM177BA6PVY3 158 aa11.24□□□□□ -0.61
PDPN-209ENST00000510906 NPHP1O15259 732 aa11.24□□□□□ -0.61
PDPN-209ENST00000510906 SPTLC1O15269 473 aa11.24□□□□□ -0.61
PDPN-209ENST00000510906 EIF2S2P20042 333 aaKnown RBP11.24□□□□□ -0.61
PDPN-209ENST00000510906 PDE6BP35913 854 aa11.24□□□□□ -0.61
PDPN-209ENST00000510906 KRT24Q2M2I5 525 aa11.24□□□□□ -0.61
PDPN-209ENST00000510906 CCDC184Q52MB2 194 aa11.24□□□□□ -0.61
PDPN-209ENST00000510906 VARS2Q5ST30 1063 aaKnown RBP11.24□□□□□ -0.61
PDPN-209ENST00000510906 NBPF5PQ86XG9 351 aaPredicted RBP11.24□□□□□ -0.61
PDPN-209ENST00000510906 ZNF622Q969S3 477 aaKnown RBP eCLIP11.24□□□□□ -0.61
PDPN-209ENST00000510906 BABAM1Q9NWV8 329 aa11.24□□□□□ -0.61
PDPN-209ENST00000510906 CHL1O00533 1208 aa11.23□□□□□ -0.61
PDPN-209ENST00000510906 ANXA1P04083 346 aa11.23□□□□□ -0.61
PDPN-209ENST00000510906 ST5P78524 1137 aa11.23□□□□□ -0.61
PDPN-209ENST00000510906 RASSF7Q02833 373 aa11.23□□□□□ -0.61
PDPN-209ENST00000510906 LHX8Q68G74 356 aa11.23□□□□□ -0.61
PDPN-209ENST00000510906 RSBN1LQ6PCB5 846 aaPredicted RBP11.23□□□□□ -0.61
PDPN-209ENST00000510906 RIC3Q7Z5B4 369 aa11.23□□□□□ -0.61
PDPN-209ENST00000510906 ZBTB3Q9H5J0 574 aa11.23□□□□□ -0.61
PDPN-209ENST00000510906 LAS1LQ9Y4W2 734 aaKnown RBP11.23□□□□□ -0.61
PDPN-209ENST00000510906 MAP3K15Q6ZN16 1313 aa11.23□□□□□ -0.61
PDPN-209ENST00000510906 LAMB4A4D0S4 1761 aa11.23□□□□□ -0.61
PDPN-209ENST00000510906 ERVV-1B6SEH8 477 aa11.22□□□□□ -0.61
PDPN-209ENST00000510906 APAF1O14727 1248 aa11.22□□□□□ -0.61
PDPN-209ENST00000510906 PBX2P40425 430 aa11.22□□□□□ -0.61
PDPN-209ENST00000510906 ERBB4Q15303 1308 aa11.22□□□□□ -0.61
PDPN-209ENST00000510906 PROSER3Q2NL68 480 aa11.22□□□□□ -0.61
PDPN-209ENST00000510906 KIF6Q6ZMV9 814 aa11.22□□□□□ -0.61
PDPN-209ENST00000510906 LRP10Q7Z4F1 713 aa11.22□□□□□ -0.61
PDPN-209ENST00000510906 NECTIN2Q92692 538 aa11.22□□□□□ -0.61
PDPN-209ENST00000510906 RNF181Q9P0P0 153 aa11.22□□□□□ -0.61
PDPN-209ENST00000510906 PDZRN3Q9UPQ7 1066 aa11.22□□□□□ -0.61
PDPN-209ENST00000510906 ANKRD31Q8N7Z5 1873 aa11.21□□□□□ -0.61
PDPN-209ENST00000510906 ARFGEF1Q9Y6D6 1849 aa11.21□□□□□ -0.61
PDPN-209ENST00000510906 NFKBIEO00221 500 aa11.21□□□□□ -0.61
PDPN-209ENST00000510906 ST18O60284 1047 aa11.21□□□□□ -0.61
PDPN-209ENST00000510906 SRGNP10124 158 aa11.21□□□□□ -0.61
PDPN-209ENST00000510906 GPTP24298 496 aa11.21□□□□□ -0.61
PDPN-209ENST00000510906 RFC5P40937 340 aa11.21□□□□□ -0.61
PDPN-209ENST00000510906 TPTE2Q6XPS3 522 aa11.21□□□□□ -0.61
PDPN-209ENST00000510906 C21orf2O43822 256 aa11.2□□□□□ -0.62
PDPN-209ENST00000510906 DMRTA1Q5VZB9 504 aa11.2□□□□□ -0.62
PDPN-209ENST00000510906 STYK1Q6J9G0 422 aa11.2□□□□□ -0.62
PDPN-209ENST00000510906 NUTM1Q86Y26 1132 aa11.2□□□□□ -0.62
PDPN-209ENST00000510906 BANK1Q8NDB2 785 aa11.2□□□□□ -0.62
PDPN-209ENST00000510906 COL11A2P13942 1736 aaPredicted RBP11.2□□□□□ -0.62
PDPN-209ENST00000510906 ABCC12Q96J65 1359 aa11.19□□□□□ -0.62
PDPN-209ENST00000510906 DLEC1Q9Y238 1755 aa11.19□□□□□ -0.62
PDPN-209ENST00000510906 UBN2Q6ZU65 1347 aa11.19□□□□□ -0.62
PDPN-209ENST00000510906 MOXD2PA6NHM9 499 aa11.19□□□□□ -0.62
PDPN-209ENST00000510906 SPDYE5A6NIY4 337 aa11.19□□□□□ -0.62
PDPN-209ENST00000510906 GTF2E1P29083 439 aaPredicted RBP11.19□□□□□ -0.62
PDPN-209ENST00000510906 PRPF40BQ6NWY9 871 aaKnown RBP11.19□□□□□ -0.62
PDPN-209ENST00000510906 CNKSR1Q969H4 720 aa11.19□□□□□ -0.62
PDPN-209ENST00000510906 MASTLQ96GX5 879 aa11.19□□□□□ -0.62
PDPN-209ENST00000510906 NMRK2Q9NPI5 230 aa11.19□□□□□ -0.62
PDPN-209ENST00000510906 KLRG2A4D1S0 409 aaPredicted RBP11.18□□□□□ -0.62
PDPN-209ENST00000510906 ZNF853P0CG23 659 aa11.18□□□□□ -0.62
PDPN-209ENST00000510906 NPR1P16066 1061 aa11.18□□□□□ -0.62
PDPN-209ENST00000510906 LMNB1P20700 586 aa11.18□□□□□ -0.62
PDPN-209ENST00000510906 ERFEQ4G0M1 354 aa11.18□□□□□ -0.62
PDPN-209ENST00000510906 SUSD4Q5VX71 490 aa11.18□□□□□ -0.62
PDPN-209ENST00000510906 COPS6Q7L5N1 327 aa11.18□□□□□ -0.62
PDPN-209ENST00000510906 ZNF34Q8IZ26 560 aa11.18□□□□□ -0.62
PDPN-209ENST00000510906 XAGE3Q8WTP9 111 aa11.18□□□□□ -0.62
PDPN-209ENST00000510906 CLUAP1Q96AJ1 413 aa11.18□□□□□ -0.62
PDPN-209ENST00000510906 C1orf115Q9H7X2 142 aa11.18□□□□□ -0.62
PDPN-209ENST00000510906 MBIPQ9NS73 344 aa11.18□□□□□ -0.62
PDPN-209ENST00000510906 KDM4AO75164 1064 aa11.17□□□□□ -0.62
PDPN-209ENST00000510906 GCGRP47871 477 aa11.17□□□□□ -0.62
PDPN-209ENST00000510906 AIMP1Q12904 312 aaKnown RBP11.17□□□□□ -0.62
PDPN-209ENST00000510906 SWT1Q5T5J6 900 aaKnown RBP11.17□□□□□ -0.62
PDPN-209ENST00000510906 HDGFL1Q5TGJ6 251 aa11.17□□□□□ -0.62
PDPN-209ENST00000510906 HOMEZQ8IX15 550 aa11.17□□□□□ -0.62
PDPN-209ENST00000510906 ZNF687Q8N1G0 1237 aa11.17□□□□□ -0.62
PDPN-209ENST00000510906 RDH13Q8NBN7 331 aa11.17□□□□□ -0.62
PDPN-209ENST00000510906 NYXQ9GZU5 481 aa11.17□□□□□ -0.62
PDPN-209ENST00000510906 DDX21Q9NR30 783 aaKnown RBP eCLIP11.17□□□□□ -0.62
PDPN-209ENST00000510906 CHPF2Q9P2E5 772 aa11.17□□□□□ -0.62
PDPN-209ENST00000510906 VPS9D1Q9Y2B5 631 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms