RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 PDGFAP04085 211 aa6.98□□□□□ -1.29
CAST-229ENST00000510098 HOXD8P13378 290 aaPredicted RBP6.98□□□□□ -1.29
CAST-229ENST00000510098 PCSK2P16519 638 aa6.98□□□□□ -1.29
CAST-229ENST00000510098 GRIK5Q16478 980 aa6.98□□□□□ -1.29
CAST-229ENST00000510098 TTC39BQ5VTQ0 682 aaPredicted RBP6.98□□□□□ -1.29
CAST-229ENST00000510098 ALKBH2Q6NS38 261 aa6.98□□□□□ -1.29
CAST-229ENST00000510098 TTC16Q8NEE8 873 aa6.98□□□□□ -1.29
CAST-229ENST00000510098 SMG9Q9H0W8 520 aaKnown RBP6.98□□□□□ -1.29
CAST-229ENST00000510098 GGNBP2Q9H3C7 697 aa6.98□□□□□ -1.29
CAST-229ENST00000510098 ELP3Q9H9T3 547 aa6.98□□□□□ -1.29
CAST-229ENST00000510098 FRRS1LQ9P0K9 344 aa6.98□□□□□ -1.29
CAST-229ENST00000510098 A6NHS1 94 aa6.97□□□□□ -1.29
CAST-229ENST00000510098 RPLP1P05386 114 aaKnown RBP6.97□□□□□ -1.29
CAST-229ENST00000510098 SPATA31C1P0DKV0 1188 aa6.97□□□□□ -1.29
CAST-229ENST00000510098 MZF1P28698 734 aaPredicted RBP6.97□□□□□ -1.29
CAST-229ENST00000510098 CHRNA4P43681 627 aa6.97□□□□□ -1.29
CAST-229ENST00000510098 SERPINB4P48594 390 aa6.97□□□□□ -1.29
CAST-229ENST00000510098 TRIM28Q13263 835 aaKnown RBP6.97□□□□□ -1.29
CAST-229ENST00000510098 SF3B2Q13435 895 aaKnown RBP6.97□□□□□ -1.29
CAST-229ENST00000510098 AAMPQ13685 434 aa6.97□□□□□ -1.29
CAST-229ENST00000510098 PRRT3Q5FWE3 981 aa6.97□□□□□ -1.29
CAST-229ENST00000510098 COL13A1Q5TAT6 717 aaPredicted RBP6.97□□□□□ -1.29
CAST-229ENST00000510098 PDE12Q6L8Q7 609 aaKnown RBP6.97□□□□□ -1.29
CAST-229ENST00000510098 PLD4Q96BZ4 506 aa6.97□□□□□ -1.29
CAST-229ENST00000510098 ABI2Q9NYB9 513 aaPredicted RBP6.97□□□□□ -1.29
CAST-229ENST00000510098 TMEM63CQ9P1W3 806 aa6.97□□□□□ -1.29
CAST-229ENST00000510098 POLIQ9UNA4 740 aa6.97□□□□□ -1.29
CAST-229ENST00000510098 GHRHP01286 108 aa6.96□□□□□ -1.3
CAST-229ENST00000510098 CYP2E1P05181 493 aaPredicted RBP6.96□□□□□ -1.3
CAST-229ENST00000510098 KCNA1Q09470 495 aa6.96□□□□□ -1.3
CAST-229ENST00000510098 C8orf34Q49A92 452 aa6.96□□□□□ -1.3
CAST-229ENST00000510098 ILDR2Q71H61 639 aa6.96□□□□□ -1.3
CAST-229ENST00000510098 ZNF438Q7Z4V0 828 aa6.96□□□□□ -1.3
CAST-229ENST00000510098 DMRTC2Q8IXT2 367 aaPredicted RBP6.96□□□□□ -1.3
CAST-229ENST00000510098 TTC9Q92623 222 aa6.96□□□□□ -1.3
CAST-229ENST00000510098 A0A0A0MRY4 1105 aa6.95□□□□□ -1.3
CAST-229ENST00000510098 K7ELQ4 463 aaPredicted RBP6.95□□□□□ -1.3
CAST-229ENST00000510098 FZD6O60353 706 aa6.95□□□□□ -1.3
CAST-229ENST00000510098 ICMTO60725 284 aa6.95□□□□□ -1.3
CAST-229ENST00000510098 TRIM26Q12899 539 aaPredicted RBP6.95□□□□□ -1.3
CAST-229ENST00000510098 GRIK4Q16099 956 aa6.95□□□□□ -1.3
CAST-229ENST00000510098 MSL1Q68DK7 614 aa6.95□□□□□ -1.3
CAST-229ENST00000510098 RBSNQ9H1K0 784 aa6.95□□□□□ -1.3
CAST-229ENST00000510098 CCDC87Q9NVE4 849 aa6.95□□□□□ -1.3
CAST-229ENST00000510098 CNTN3Q9P232 1028 aa6.95□□□□□ -1.3
CAST-229ENST00000510098 HYAL2Q12891 473 aa6.94□□□□□ -1.3
CAST-229ENST00000510098 XKR5Q6UX68 686 aa6.94□□□□□ -1.3
CAST-229ENST00000510098 TXNDC2Q86VQ3 553 aa6.94□□□□□ -1.3
CAST-229ENST00000510098 WFDC8Q8IUA0 241 aa6.94□□□□□ -1.3
CAST-229ENST00000510098 EGFL7Q9UHF1 273 aa6.94□□□□□ -1.3
CAST-229ENST00000510098 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.94□□□□□ -1.3
CAST-229ENST00000510098 H3BRB1 525 aa6.93□□□□□ -1.3
CAST-229ENST00000510098 GDF6Q6KF10 455 aaPredicted RBP6.93□□□□□ -1.3
CAST-229ENST00000510098 C1orf127Q8N9H9 656 aa6.93□□□□□ -1.3
CAST-229ENST00000510098 CCER1Q8TC90 406 aaPredicted RBP6.93□□□□□ -1.3
CAST-229ENST00000510098 TUT1Q9H6E5 874 aaKnown RBP6.93□□□□□ -1.3
CAST-229ENST00000510098 KIF4AO95239 1232 aa6.92□□□□□ -1.3
CAST-229ENST00000510098 APBA3O96018 575 aa6.92□□□□□ -1.3
CAST-229ENST00000510098 RAC1P63000 192 aa6.92□□□□□ -1.3
CAST-229ENST00000510098 ATP11AP98196 1134 aa6.92□□□□□ -1.3
CAST-229ENST00000510098 ECM1Q16610 540 aa6.92□□□□□ -1.3
CAST-229ENST00000510098 GLYCTKQ8IVS8 523 aa6.92□□□□□ -1.3
CAST-229ENST00000510098 SPACA7Q96KW9 195 aa6.92□□□□□ -1.3
CAST-229ENST00000510098 KANSL3Q9P2N6 904 aa6.92□□□□□ -1.3
CAST-229ENST00000510098 TRIM33Q9UPN9 1127 aa6.92□□□□□ -1.3
CAST-229ENST00000510098 IVNS1ABPQ9Y6Y0 642 aa6.92□□□□□ -1.3
CAST-229ENST00000510098 FURINP09958 794 aa6.91□□□□□ -1.3
CAST-229ENST00000510098 ELNP15502 786 aa6.91□□□□□ -1.3
CAST-229ENST00000510098 NCAPG2Q86XI2 1143 aa6.91□□□□□ -1.3
CAST-229ENST00000510098 FMR1NBQ8N0W7 255 aaPredicted RBP6.91□□□□□ -1.3
CAST-229ENST00000510098 CEP120Q8N960 986 aa6.91□□□□□ -1.3
CAST-229ENST00000510098 SELPP16109 830 aa6.9□□□□□ -1.3
CAST-229ENST00000510098 CES1P23141 567 aa6.9□□□□□ -1.3
CAST-229ENST00000510098 ITGB7P26010 798 aa6.9□□□□□ -1.3
CAST-229ENST00000510098 USP5P45974 858 aa6.9□□□□□ -1.3
CAST-229ENST00000510098 SHISA2Q6UWI4 295 aa6.9□□□□□ -1.3
CAST-229ENST00000510098 GJD3Q8N144 294 aa6.9□□□□□ -1.3
CAST-229ENST00000510098 IL22RA1Q8N6P7 574 aa6.9□□□□□ -1.3
CAST-229ENST00000510098 NACC1Q96RE7 527 aa6.9□□□□□ -1.3
CAST-229ENST00000510098 RASSF4Q9H2L5 321 aa6.9□□□□□ -1.3
CAST-229ENST00000510098 CHRDQ9H2X0 955 aa6.9□□□□□ -1.3
CAST-229ENST00000510098 SALL4Q9UJQ4 1053 aa6.9□□□□□ -1.3
CAST-229ENST00000510098 TNFRSF21O75509 655 aa6.89□□□□□ -1.31
CAST-229ENST00000510098 ARHGAP4P98171 946 aa6.89□□□□□ -1.31
CAST-229ENST00000510098 EHHADHQ08426 723 aa6.89□□□□□ -1.31
CAST-229ENST00000510098 CEP135Q66GS9 1140 aa6.89□□□□□ -1.31
CAST-229ENST00000510098 DTWD1Q8N5C7 304 aa6.89□□□□□ -1.31
CAST-229ENST00000510098 PBX4Q9BYU1 374 aa6.89□□□□□ -1.31
CAST-229ENST00000510098 FOXD3Q9UJU5 478 aaPredicted RBP6.89□□□□□ -1.31
CAST-229ENST00000510098 GNEQ9Y223 722 aaKnown RBP6.89□□□□□ -1.31
CAST-229ENST00000510098 DEAF1O75398 565 aaPredicted RBP6.88□□□□□ -1.31
CAST-229ENST00000510098 SMNDC1O75940 238 aaKnown RBP eCLIP6.88□□□□□ -1.31
CAST-229ENST00000510098 ACPPP15309 386 aa6.88□□□□□ -1.31
CAST-229ENST00000510098 GATA4P43694 442 aa6.88□□□□□ -1.31
CAST-229ENST00000510098 ADAMTSL4Q6UY14 1074 aa6.88□□□□□ -1.31
CAST-229ENST00000510098 FBXO11Q86XK2 927 aa6.88□□□□□ -1.31
CAST-229ENST00000510098 LACRTQ9GZZ8 138 aa6.88□□□□□ -1.31
CAST-229ENST00000510098 GZF1Q9H116 711 aaPredicted RBP6.88□□□□□ -1.31
CAST-229ENST00000510098 BRPF3Q9ULD4 1205 aa6.88□□□□□ -1.31
CAST-229ENST00000510098 EREGO14944 169 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms