RNA–Protein interactions for RNA: ENST00000510060.5

SSBP2-214, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 1,042 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-214ENST00000510060 TRIM28Q13263 835 aaKnown RBP9.79□□□□□ -0.84
SSBP2-214ENST00000510060 COL9A3Q14050 684 aaPredicted RBP9.79□□□□□ -0.84
SSBP2-214ENST00000510060 C8orf86Q6ZUL3 223 aa9.79□□□□□ -0.84
SSBP2-214ENST00000510060 NUDT16Q96DE0 195 aaKnown RBP9.79□□□□□ -0.84
SSBP2-214ENST00000510060 EGFL7Q9UHF1 273 aa9.79□□□□□ -0.84
SSBP2-214ENST00000510060 RIMBP3CA6NJZ7 1639 aa9.78□□□□□ -0.84
SSBP2-214ENST00000510060 RIMBP3BA6NNM3 1639 aa9.78□□□□□ -0.84
SSBP2-214ENST00000510060 RIMBP3Q9UFD9 1639 aa9.78□□□□□ -0.84
SSBP2-214ENST00000510060 LOC102724428A0A0B4J2F2 783 aa9.78□□□□□ -0.84
SSBP2-214ENST00000510060 ABL1P00519 1130 aa9.78□□□□□ -0.84
SSBP2-214ENST00000510060 SIK1P57059 783 aa9.78□□□□□ -0.84
SSBP2-214ENST00000510060 RAC1P63000 192 aa9.78□□□□□ -0.84
SSBP2-214ENST00000510060 MLLT1Q03111 559 aaPredicted RBP9.78□□□□□ -0.84
SSBP2-214ENST00000510060 PERM1Q5SV97 790 aa9.78□□□□□ -0.84
SSBP2-214ENST00000510060 TRAPPC3LQ5T215 181 aa9.78□□□□□ -0.84
SSBP2-214ENST00000510060 OR13H1Q8NG92 308 aa9.78□□□□□ -0.84
SSBP2-214ENST00000510060 EDEM1Q92611 657 aa9.78□□□□□ -0.84
SSBP2-214ENST00000510060 LPIN3Q9BQK8 851 aa9.78□□□□□ -0.84
SSBP2-214ENST00000510060 ABI2Q9NYB9 513 aaPredicted RBP9.78□□□□□ -0.84
SSBP2-214ENST00000510060 PODXL2Q9NZ53 605 aa9.78□□□□□ -0.84
SSBP2-214ENST00000510060 PDS5BQ9NTI5 1447 aa9.77□□□□□ -0.85
SSBP2-214ENST00000510060 MSTNO14793 375 aa9.77□□□□□ -0.85
SSBP2-214ENST00000510060 USP5P45974 858 aa9.77□□□□□ -0.85
SSBP2-214ENST00000510060 AFF1P51825 1210 aaKnown RBP9.77□□□□□ -0.85
SSBP2-214ENST00000510060 DNM1Q05193 864 aaKnown RBP9.77□□□□□ -0.85
SSBP2-214ENST00000510060 AAMPQ13685 434 aa9.77□□□□□ -0.85
SSBP2-214ENST00000510060 ATCAYQ86WG3 371 aa9.77□□□□□ -0.85
SSBP2-214ENST00000510060 NACC1Q96RE7 527 aa9.77□□□□□ -0.85
SSBP2-214ENST00000510060 ATAD2BQ9ULI0 1458 aa9.77□□□□□ -0.85
SSBP2-214ENST00000510060 APBA3O96018 575 aa9.76□□□□□ -0.85
SSBP2-214ENST00000510060 HYAL2Q12891 473 aa9.76□□□□□ -0.85
SSBP2-214ENST00000510060 ZNF438Q7Z4V0 828 aa9.76□□□□□ -0.85
SSBP2-214ENST00000510060 NSUN5Q96P11 429 aaKnown RBP9.76□□□□□ -0.85
SSBP2-214ENST00000510060 KIF21AQ7Z4S6 1674 aa9.75□□□□□ -0.85
SSBP2-214ENST00000510060 PDGFAP04085 211 aa9.75□□□□□ -0.85
SSBP2-214ENST00000510060 EHHADHQ08426 723 aa9.75□□□□□ -0.85
SSBP2-214ENST00000510060 MTMR3Q13615 1198 aa9.75□□□□□ -0.85
SSBP2-214ENST00000510060 XKR5Q6UX68 686 aa9.75□□□□□ -0.85
SSBP2-214ENST00000510060 PLD4Q96BZ4 506 aa9.75□□□□□ -0.85
SSBP2-214ENST00000510060 SPACA7Q96KW9 195 aa9.75□□□□□ -0.85
SSBP2-214ENST00000510060 SMG9Q9H0W8 520 aaKnown RBP9.75□□□□□ -0.85
SSBP2-214ENST00000510060 ELP3Q9H9T3 547 aa9.75□□□□□ -0.85
SSBP2-214ENST00000510060 MSL1Q68DK7 614 aa9.74□□□□□ -0.85
SSBP2-214ENST00000510060 HFE2Q6ZVN8 426 aa9.74□□□□□ -0.85
SSBP2-214ENST00000510060 WFDC8Q8IUA0 241 aa9.74□□□□□ -0.85
SSBP2-214ENST00000510060 CACTIN-AS1Q8N1I8 211 aa9.74□□□□□ -0.85
SSBP2-214ENST00000510060 DTWD1Q8N5C7 304 aa9.74□□□□□ -0.85
SSBP2-214ENST00000510060 LAMC3Q9Y6N6 1575 aa9.73□□□□□ -0.85
SSBP2-214ENST00000510060 ZNF211Q13398 564 aaPredicted RBP9.73□□□□□ -0.85
SSBP2-214ENST00000510060 C8orf34Q49A92 452 aa9.73□□□□□ -0.85
SSBP2-214ENST00000510060 SPOCK3Q9BQ16 436 aa9.73□□□□□ -0.85
SSBP2-214ENST00000510060 J3QW42 95 aa9.72□□□□□ -0.85
SSBP2-214ENST00000510060 ICMTO60725 284 aa9.72□□□□□ -0.85
SSBP2-214ENST00000510060 ELNP15502 786 aa9.72□□□□□ -0.85
SSBP2-214ENST00000510060 PMEPA1Q969W9 287 aa9.72□□□□□ -0.85
SSBP2-214ENST00000510060 A0A0A0MRY4 1105 aa9.71□□□□□ -0.86
SSBP2-214ENST00000510060 C1QTNF9BB2RNN3 333 aa9.71□□□□□ -0.86
SSBP2-214ENST00000510060 ITGB2P05107 769 aa9.71□□□□□ -0.86
SSBP2-214ENST00000510060 GRIK5Q16478 980 aa9.71□□□□□ -0.86
SSBP2-214ENST00000510060 GLYCTKQ8IVS8 523 aa9.71□□□□□ -0.86
SSBP2-214ENST00000510060 CCER1Q8TC90 406 aaPredicted RBP9.71□□□□□ -0.86
SSBP2-214ENST00000510060 POLIQ9UNA4 740 aa9.71□□□□□ -0.86
SSBP2-214ENST00000510060 KIF4AO95239 1232 aa9.7□□□□□ -0.86
SSBP2-214ENST00000510060 CD163Q86VB7 1156 aa9.7□□□□□ -0.86
SSBP2-214ENST00000510060 DMRTC2Q8IXT2 367 aaPredicted RBP9.7□□□□□ -0.86
SSBP2-214ENST00000510060 DCAF11Q8TEB1 546 aa9.7□□□□□ -0.86
SSBP2-214ENST00000510060 ANO2Q9NQ90 1003 aa9.7□□□□□ -0.86
SSBP2-214ENST00000510060 TMEM63CQ9P1W3 806 aa9.7□□□□□ -0.86
SSBP2-214ENST00000510060 FAM229AH3BQW9 127 aa9.69□□□□□ -0.86
SSBP2-214ENST00000510060 H3BRB1 525 aa9.69□□□□□ -0.86
SSBP2-214ENST00000510060 ARHGEF11O15085 1522 aa9.69□□□□□ -0.86
SSBP2-214ENST00000510060 SMNDC1O75940 238 aaKnown RBP eCLIP9.69□□□□□ -0.86
SSBP2-214ENST00000510060 PROCP04070 461 aa9.69□□□□□ -0.86
SSBP2-214ENST00000510060 CHRNA4P43681 627 aa9.69□□□□□ -0.86
SSBP2-214ENST00000510060 SERPINB4P48594 390 aa9.69□□□□□ -0.86
SSBP2-214ENST00000510060 HMGXB3Q12766 1538 aa9.69□□□□□ -0.86
SSBP2-214ENST00000510060 TXNDC2Q86VQ3 553 aa9.69□□□□□ -0.86
SSBP2-214ENST00000510060 NCAPG2Q86XI2 1143 aa9.69□□□□□ -0.86
SSBP2-214ENST00000510060 FMR1NBQ8N0W7 255 aaPredicted RBP9.69□□□□□ -0.86
SSBP2-214ENST00000510060 MUC3BQ9H195 1237 aa9.69□□□□□ -0.86
SSBP2-214ENST00000510060 GGNBP2Q9H3C7 697 aa9.69□□□□□ -0.86
SSBP2-214ENST00000510060 TUT1Q9H6E5 874 aaKnown RBP9.69□□□□□ -0.86
SSBP2-214ENST00000510060 SRA1Q9HD15 236 aaKnown RBP9.69□□□□□ -0.86
SSBP2-214ENST00000510060 MRC2Q9UBG0 1479 aa9.69□□□□□ -0.86
SSBP2-214ENST00000510060 C9orf172C9J069 976 aa9.68□□□□□ -0.86
SSBP2-214ENST00000510060 FZD6O60353 706 aa9.68□□□□□ -0.86
SSBP2-214ENST00000510060 ILDR2Q71H61 639 aa9.68□□□□□ -0.86
SSBP2-214ENST00000510060 BRD1O95696 1058 aa9.67□□□□□ -0.86
SSBP2-214ENST00000510060 CES1P23141 567 aa9.67□□□□□ -0.86
SSBP2-214ENST00000510060 NRG1Q02297 640 aaPredicted RBP9.67□□□□□ -0.86
SSBP2-214ENST00000510060 GDF6Q6KF10 455 aaPredicted RBP9.67□□□□□ -0.86
SSBP2-214ENST00000510060 SNX29Q8TEQ0 813 aa9.67□□□□□ -0.86
SSBP2-214ENST00000510060 FAM177BA6PVY3 158 aa9.66□□□□□ -0.86
SSBP2-214ENST00000510060 MAP4K3Q8IVH8 894 aa9.66□□□□□ -0.86
SSBP2-214ENST00000510060 GJD3Q8N144 294 aa9.66□□□□□ -0.86
SSBP2-214ENST00000510060 BRPF3Q9ULD4 1205 aa9.66□□□□□ -0.86
SSBP2-214ENST00000510060 BAZ1BQ9UIG0 1483 aaKnown RBP9.66□□□□□ -0.86
SSBP2-214ENST00000510060 NDUFB5O43674 189 aa9.65□□□□□ -0.86
SSBP2-214ENST00000510060 CYP2E1P05181 493 aaPredicted RBP9.65□□□□□ -0.86
SSBP2-214ENST00000510060 GATA4P43694 442 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms