RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 VIL1P09327 827 aaKnown RBP14.51□□□□□ -0.09
SNF8-207ENST00000509995 ZNF280AP59817 542 aaPredicted RBP14.51□□□□□ -0.09
SNF8-207ENST00000509995 TCIRG1Q13488 830 aa14.51□□□□□ -0.09
SNF8-207ENST00000509995 GRAPQ13588 217 aa14.51□□□□□ -0.09
SNF8-207ENST00000509995 SLC4A8Q2Y0W8 1093 aa14.51□□□□□ -0.09
SNF8-207ENST00000509995 IFNL1Q8IU54 200 aa14.51□□□□□ -0.09
SNF8-207ENST00000509995 GRAPLQ8TC17 118 aaPredicted RBP14.51□□□□□ -0.09
SNF8-207ENST00000509995 SCAF8Q9UPN6 1271 aaKnown RBP14.51□□□□□ -0.09
SNF8-207ENST00000509995 RIMBP2O15034 1052 aa14.5□□□□□ -0.09
SNF8-207ENST00000509995 SLC9C1Q4G0N8 1177 aa14.5□□□□□ -0.09
SNF8-207ENST00000509995 PARP10Q53GL7 1025 aa14.5□□□□□ -0.09
SNF8-207ENST00000509995 SPRYD7Q5W111 196 aa14.5□□□□□ -0.09
SNF8-207ENST00000509995 DDX46Q7L014 1031 aaKnown RBP14.5□□□□□ -0.09
SNF8-207ENST00000509995 TMC4Q7Z404 712 aa14.5□□□□□ -0.09
SNF8-207ENST00000509995 A0A1W2PPC1 479 aa14.49□□□□□ -0.09
SNF8-207ENST00000509995 MANSC4A6NHS7 340 aaPredicted RBP14.49□□□□□ -0.09
SNF8-207ENST00000509995 CAP1Q01518 475 aa14.49□□□□□ -0.09
SNF8-207ENST00000509995 DOK7Q18PE1 504 aa14.49□□□□□ -0.09
SNF8-207ENST00000509995 PRAMEF18Q5VWM3 479 aa14.49□□□□□ -0.09
SNF8-207ENST00000509995 NBPF11Q86T75 865 aa14.49□□□□□ -0.09
SNF8-207ENST00000509995 LRCH3Q96II8 777 aa14.49□□□□□ -0.09
SNF8-207ENST00000509995 COL3A1P02461 1466 aaPredicted RBP14.49□□□□□ -0.09
SNF8-207ENST00000509995 IGF2BP3O00425 579 aaKnown RBP eCLIP14.48□□□□□ -0.09
SNF8-207ENST00000509995 NF2P35240 595 aa14.48□□□□□ -0.09
SNF8-207ENST00000509995 INHBEP58166 350 aa14.48□□□□□ -0.09
SNF8-207ENST00000509995 PTPN12Q05209 780 aaKnown RBP14.48□□□□□ -0.09
SNF8-207ENST00000509995 GIGYF2Q6Y7W6 1299 aaKnown RBP14.48□□□□□ -0.09
SNF8-207ENST00000509995 DPF3Q92784 378 aa14.48□□□□□ -0.09
SNF8-207ENST00000509995 UTP14AQ9BVJ6 771 aaKnown RBP14.48□□□□□ -0.09
SNF8-207ENST00000509995 NECTIN2Q92692 538 aa14.47□□□□□ -0.09
SNF8-207ENST00000509995 MYOZ2Q9NPC6 264 aa14.47□□□□□ -0.09
SNF8-207ENST00000509995 POLLQ9UGP5 575 aa14.47□□□□□ -0.09
SNF8-207ENST00000509995 NSFL1CQ9UNZ2 370 aaKnown RBP14.47□□□□□ -0.09
SNF8-207ENST00000509995 EYSQ5T1H1 3165 aa14.47□□□□□ -0.09
SNF8-207ENST00000509995 ZNF646O15015 1829 aaPredicted RBP14.47□□□□□ -0.09
SNF8-207ENST00000509995 MUC3AQ02505 3323 aa14.47□□□□□ -0.09
SNF8-207ENST00000509995 C6orf229H3BNL8 230 aa14.46□□□□□ -0.09
SNF8-207ENST00000509995 SP3Q02447 781 aa14.46□□□□□ -0.09
SNF8-207ENST00000509995 CRHR2Q13324 411 aa14.46□□□□□ -0.09
SNF8-207ENST00000509995 AGBL3Q8NEM8 1001 aa14.46□□□□□ -0.09
SNF8-207ENST00000509995 EYA3Q99504 573 aa14.46□□□□□ -0.09
SNF8-207ENST00000509995 PTCH2Q9Y6C5 1203 aa14.46□□□□□ -0.09
SNF8-207ENST00000509995 MYCP01106 439 aaPredicted RBP14.45□□□□□ -0.1
SNF8-207ENST00000509995 HCLS1P14317 486 aaPredicted RBP14.45□□□□□ -0.1
SNF8-207ENST00000509995 MYL6BP14649 208 aa14.45□□□□□ -0.1
SNF8-207ENST00000509995 RSBN1LQ6PCB5 846 aaPredicted RBP14.45□□□□□ -0.1
SNF8-207ENST00000509995 ARMC9Q7Z3E5 817 aa14.45□□□□□ -0.1
SNF8-207ENST00000509995 RRP7AQ9Y3A4 280 aaKnown RBP14.45□□□□□ -0.1
SNF8-207ENST00000509995 KNSTRNQ9Y448 316 aa14.45□□□□□ -0.1
SNF8-207ENST00000509995 WTIPA6NIX2 430 aaPredicted RBP14.44□□□□□ -0.1
SNF8-207ENST00000509995 U2SURPO15042 1029 aaKnown RBP14.44□□□□□ -0.1
SNF8-207ENST00000509995 USP17L8P0C7I0 530 aa14.44□□□□□ -0.1
SNF8-207ENST00000509995 LDLRAD1Q5T700 205 aa14.44□□□□□ -0.1
SNF8-207ENST00000509995 MCM10Q7L590 875 aa14.44□□□□□ -0.1
SNF8-207ENST00000509995 SHISA4Q96DD7 197 aa14.44□□□□□ -0.1
SNF8-207ENST00000509995 STXBP5LQ9Y2K9 1186 aa14.44□□□□□ -0.1
SNF8-207ENST00000509995 COL4A1P02462 1669 aa14.44□□□□□ -0.1
SNF8-207ENST00000509995 ZBTB48P10074 688 aaPredicted RBP14.43□□□□□ -0.1
SNF8-207ENST00000509995 GPSM2P81274 684 aa14.43□□□□□ -0.1
SNF8-207ENST00000509995 AMER1Q5JTC6 1135 aaPredicted RBP14.43□□□□□ -0.1
SNF8-207ENST00000509995 PHACTR3Q96KR7 559 aa14.43□□□□□ -0.1
SNF8-207ENST00000509995 GMLQ99445 158 aa14.43□□□□□ -0.1
SNF8-207ENST00000509995 PRKG1Q13976 671 aa14.42□□□□□ -0.1
SNF8-207ENST00000509995 NBPF9Q3BBW0 867 aa14.42□□□□□ -0.1
SNF8-207ENST00000509995 GPR153Q6NV75 609 aa14.42□□□□□ -0.1
SNF8-207ENST00000509995 ANKRD13DQ6ZTN6 518 aa14.42□□□□□ -0.1
SNF8-207ENST00000509995 TBC1D16Q8TBP0 767 aa14.42□□□□□ -0.1
SNF8-207ENST00000509995 RTF1Q92541 710 aaKnown RBP14.42□□□□□ -0.1
SNF8-207ENST00000509995 NR2E3Q9Y5X4 410 aa14.42□□□□□ -0.1
SNF8-207ENST00000509995 ZBTB7BO15156 539 aaPredicted RBP14.41□□□□□ -0.1
SNF8-207ENST00000509995 DEFB123Q8N688 67 aa14.41□□□□□ -0.1
SNF8-207ENST00000509995 CELF1Q92879 486 aaKnown RBP14.41□□□□□ -0.1
SNF8-207ENST00000509995 WNK4Q96J92 1243 aa14.41□□□□□ -0.1
SNF8-207ENST00000509995 HTATIP2Q9BUP3 242 aa14.41□□□□□ -0.1
SNF8-207ENST00000509995 ZC3H12CQ9C0D7 883 aaKnown RBP14.41□□□□□ -0.1
SNF8-207ENST00000509995 ANGEL1Q9UNK9 670 aaKnown RBP14.41□□□□□ -0.1
SNF8-207ENST00000509995 ZSWIM8A7E2V4 1837 aa14.41□□□□□ -0.1
SNF8-207ENST00000509995 PRKAR2BP31323 418 aa14.4□□□□□ -0.1
SNF8-207ENST00000509995 OTUD7BQ6GQQ9 843 aa14.4□□□□□ -0.1
SNF8-207ENST00000509995 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.4□□□□□ -0.1
SNF8-207ENST00000509995 SH3TC2Q8TF17 1288 aa14.4□□□□□ -0.1
SNF8-207ENST00000509995 SLC10A4Q96EP9 437 aa14.4□□□□□ -0.1
SNF8-207ENST00000509995 PRDM6Q9NQX0 595 aa14.4□□□□□ -0.1
SNF8-207ENST00000509995 G3V3G9 751 aa14.39□□□□□ -0.11
SNF8-207ENST00000509995 ARHGEF6Q15052 776 aa14.39□□□□□ -0.11
SNF8-207ENST00000509995 DCAF8Q5TAQ9 597 aa14.39□□□□□ -0.11
SNF8-207ENST00000509995 UBE2Q1Q7Z7E8 422 aa14.39□□□□□ -0.11
SNF8-207ENST00000509995 NLRP10Q86W26 655 aa14.39□□□□□ -0.11
SNF8-207ENST00000509995 SH3TC1Q8TE82 1336 aa14.39□□□□□ -0.11
SNF8-207ENST00000509995 PRUNE2Q8WUY3 3088 aa14.38□□□□□ -0.11
SNF8-207ENST00000509995 WNT10BO00744 389 aa14.38□□□□□ -0.11
SNF8-207ENST00000509995 DCTN1Q14203 1278 aa14.38□□□□□ -0.11
SNF8-207ENST00000509995 TAF7Q15545 349 aaPredicted RBP14.38□□□□□ -0.11
SNF8-207ENST00000509995 Q7L0L9 218 aa14.38□□□□□ -0.11
SNF8-207ENST00000509995 CLMNQ96JQ2 1002 aa14.38□□□□□ -0.11
SNF8-207ENST00000509995 RSPH6AQ9H0K4 717 aa14.38□□□□□ -0.11
SNF8-207ENST00000509995 MIS18AQ9NYP9 233 aa14.38□□□□□ -0.11
SNF8-207ENST00000509995 TRMT112Q9UI30 125 aaKnown RBP14.38□□□□□ -0.11
SNF8-207ENST00000509995 FZD1Q9UP38 647 aa14.38□□□□□ -0.11
SNF8-207ENST00000509995 ERBB4Q15303 1308 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms