RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 NSUN5Q96P11 429 aaKnown RBP12.16□□□□□ -0.46
TRAPPC11-206ENST00000509857 FOXD3Q9UJU5 478 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC11-206ENST00000509857 PHF20L1A8MW92 1017 aa12.15□□□□□ -0.46
TRAPPC11-206ENST00000509857 PHACTR2O75167 634 aa12.15□□□□□ -0.46
TRAPPC11-206ENST00000509857 ALBP02768 609 aa12.15□□□□□ -0.46
TRAPPC11-206ENST00000509857 MARSP56192 900 aaKnown RBP12.15□□□□□ -0.46
TRAPPC11-206ENST00000509857 GZF1Q9H116 711 aaPredicted RBP12.15□□□□□ -0.46
TRAPPC11-206ENST00000509857 ZBTB7CA1YPR0 619 aa12.14□□□□□ -0.47
TRAPPC11-206ENST00000509857 PERM1Q5SV97 790 aa12.14□□□□□ -0.47
TRAPPC11-206ENST00000509857 MICALL1Q8N3F8 863 aa12.14□□□□□ -0.47
TRAPPC11-206ENST00000509857 ASB16Q96NS5 453 aa12.14□□□□□ -0.47
TRAPPC11-206ENST00000509857 LPIN3Q9BQK8 851 aa12.14□□□□□ -0.47
TRAPPC11-206ENST00000509857 NEFLP07196 543 aa12.13□□□□□ -0.47
TRAPPC11-206ENST00000509857 CPB1P15086 417 aa12.13□□□□□ -0.47
TRAPPC11-206ENST00000509857 CES1P23141 567 aa12.13□□□□□ -0.47
TRAPPC11-206ENST00000509857 SNRPNP63162 240 aaKnown RBP12.13□□□□□ -0.47
TRAPPC11-206ENST00000509857 TMC1Q8TDI8 760 aa12.13□□□□□ -0.47
TRAPPC11-206ENST00000509857 SALL4Q9UJQ4 1053 aa12.13□□□□□ -0.47
TRAPPC11-206ENST00000509857 M0R082 166 aa12.12□□□□□ -0.47
TRAPPC11-206ENST00000509857 TREHO43280 583 aa12.12□□□□□ -0.47
TRAPPC11-206ENST00000509857 PSAPL1Q6NUJ1 521 aa12.12□□□□□ -0.47
TRAPPC11-206ENST00000509857 LINC00114Q6XXX2 140 aa12.12□□□□□ -0.47
TRAPPC11-206ENST00000509857 HFE2Q6ZVN8 426 aa12.12□□□□□ -0.47
TRAPPC11-206ENST00000509857 ZNF417Q8TAU3 575 aa12.12□□□□□ -0.47
TRAPPC11-206ENST00000509857 TTC9Q92623 222 aa12.12□□□□□ -0.47
TRAPPC11-206ENST00000509857 ZNF587Q96SQ5 575 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC11-206ENST00000509857 ZFYVE28Q9HCC9 887 aa12.12□□□□□ -0.47
TRAPPC11-206ENST00000509857 J3QW42 95 aa12.11□□□□□ -0.47
TRAPPC11-206ENST00000509857 EIF2AK2P19525 551 aaKnown RBP12.11□□□□□ -0.47
TRAPPC11-206ENST00000509857 DSC3Q14574 896 aa12.11□□□□□ -0.47
TRAPPC11-206ENST00000509857 ZSCAN29Q8IWY8 852 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC11-206ENST00000509857 RRAGCQ9HB90 399 aa12.11□□□□□ -0.47
TRAPPC11-206ENST00000509857 KANSL3Q9P2N6 904 aa12.11□□□□□ -0.47
TRAPPC11-206ENST00000509857 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC11-206ENST00000509857 EREGO14944 169 aa12.1□□□□□ -0.47
TRAPPC11-206ENST00000509857 COL9A3Q14050 684 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC11-206ENST00000509857 ELMSAN1Q6PJG2 1045 aa12.1□□□□□ -0.47
TRAPPC11-206ENST00000509857 CEP120Q8N960 986 aa12.1□□□□□ -0.47
TRAPPC11-206ENST00000509857 MKL2Q9ULH7 1088 aa12.1□□□□□ -0.47
TRAPPC11-206ENST00000509857 ORC1Q13415 861 aa12.09□□□□□ -0.47
TRAPPC11-206ENST00000509857 BEND7Q8N7W2 519 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC11-206ENST00000509857 PLD4Q96BZ4 506 aa12.09□□□□□ -0.47
TRAPPC11-206ENST00000509857 SCARF2Q96GP6 870 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC11-206ENST00000509857 NIF3L1Q9GZT8 377 aa12.09□□□□□ -0.47
TRAPPC11-206ENST00000509857 AMOTL2Q9Y2J4 779 aa12.09□□□□□ -0.47
TRAPPC11-206ENST00000509857 LILRB5O75023 590 aa12.08□□□□□ -0.48
TRAPPC11-206ENST00000509857 RGS9O75916 674 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC11-206ENST00000509857 GHRHP01286 108 aa12.08□□□□□ -0.48
TRAPPC11-206ENST00000509857 PODNQ7Z5L7 613 aa12.08□□□□□ -0.48
TRAPPC11-206ENST00000509857 NCAPG2Q86XI2 1143 aa12.08□□□□□ -0.48
TRAPPC11-206ENST00000509857 SMG9Q9H0W8 520 aaKnown RBP12.08□□□□□ -0.48
TRAPPC11-206ENST00000509857 RBSNQ9H1K0 784 aa12.08□□□□□ -0.48
TRAPPC11-206ENST00000509857 DNAJC25Q9H1X3 360 aa12.08□□□□□ -0.48
TRAPPC11-206ENST00000509857 JPH1Q9HDC5 661 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC11-206ENST00000509857 GNB5O14775 395 aa12.07□□□□□ -0.48
TRAPPC11-206ENST00000509857 C8orf86Q6ZUL3 223 aa12.07□□□□□ -0.48
TRAPPC11-206ENST00000509857 NUDT8Q8WV74 236 aa12.07□□□□□ -0.48
TRAPPC11-206ENST00000509857 SPACA7Q96KW9 195 aa12.07□□□□□ -0.48
TRAPPC11-206ENST00000509857 EIF1AYO14602 144 aaKnown RBP12.06□□□□□ -0.48
TRAPPC11-206ENST00000509857 EDN3P14138 238 aa12.06□□□□□ -0.48
TRAPPC11-206ENST00000509857 NID1P14543 1247 aa12.06□□□□□ -0.48
TRAPPC11-206ENST00000509857 AFF1P51825 1210 aaKnown RBP12.06□□□□□ -0.48
TRAPPC11-206ENST00000509857 FMR1Q06787 632 aaKnown RBP eCLIP12.06□□□□□ -0.48
TRAPPC11-206ENST00000509857 GRIK5Q16478 980 aa12.06□□□□□ -0.48
TRAPPC11-206ENST00000509857 DNAJC14Q6Y2X3 702 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC11-206ENST00000509857 CNTNAP5Q8WYK1 1306 aa12.06□□□□□ -0.48
TRAPPC11-206ENST00000509857 PIK3R2O00459 728 aa12.05□□□□□ -0.48
TRAPPC11-206ENST00000509857 CPNE3O75131 537 aaKnown RBP12.05□□□□□ -0.48
TRAPPC11-206ENST00000509857 CCDC27Q2M243 656 aa12.05□□□□□ -0.48
TRAPPC11-206ENST00000509857 ILDR2Q71H61 639 aa12.05□□□□□ -0.48
TRAPPC11-206ENST00000509857 GALNT12Q8IXK2 581 aa12.05□□□□□ -0.48
TRAPPC11-206ENST00000509857 ATP11AP98196 1134 aa12.04□□□□□ -0.48
TRAPPC11-206ENST00000509857 PLCB3Q01970 1234 aa12.04□□□□□ -0.48
TRAPPC11-206ENST00000509857 USPL1Q5W0Q7 1092 aa12.04□□□□□ -0.48
TRAPPC11-206ENST00000509857 TRIM11Q96F44 468 aa12.04□□□□□ -0.48
TRAPPC11-206ENST00000509857 CSRNP1Q96S65 589 aa12.04□□□□□ -0.48
TRAPPC11-206ENST00000509857 PBX4Q9BYU1 374 aa12.04□□□□□ -0.48
TRAPPC11-206ENST00000509857 RASSF4Q9H2L5 321 aa12.04□□□□□ -0.48
TRAPPC11-206ENST00000509857 TRIM26Q12899 539 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC11-206ENST00000509857 PEAR1Q5VY43 1037 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC11-206ENST00000509857 DZANK1Q9NVP4 752 aa12.03□□□□□ -0.48
TRAPPC11-206ENST00000509857 RNF225M0QZC1 329 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC11-206ENST00000509857 NFKBIEO00221 500 aa12.02□□□□□ -0.49
TRAPPC11-206ENST00000509857 ENOX2Q16206 610 aaKnown RBP12.02□□□□□ -0.49
TRAPPC11-206ENST00000509857 ACPPP15309 386 aa12.01□□□□□ -0.49
TRAPPC11-206ENST00000509857 COL19A1Q14993 1142 aa12.01□□□□□ -0.49
TRAPPC11-206ENST00000509857 CACTIN-AS1Q8N1I8 211 aa12.01□□□□□ -0.49
TRAPPC11-206ENST00000509857 ANKRD33BA6NCL7 494 aa12□□□□□ -0.49
TRAPPC11-206ENST00000509857 SMNDC1O75940 238 aaKnown RBP eCLIP12□□□□□ -0.49
TRAPPC11-206ENST00000509857 POLR3DP05423 398 aaPredicted RBP12□□□□□ -0.49
TRAPPC11-206ENST00000509857 ZKSCAN3Q9BRR0 538 aa12□□□□□ -0.49
TRAPPC11-206ENST00000509857 LATS2Q9NRM7 1088 aa12□□□□□ -0.49
TRAPPC11-206ENST00000509857 TMEM102Q8N9M5 508 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC11-206ENST00000509857 CCDC74AQ96AQ1 378 aa11.99□□□□□ -0.49
TRAPPC11-206ENST00000509857 OSMRQ99650 979 aa11.99□□□□□ -0.49
TRAPPC11-206ENST00000509857 NOP53Q9NZM5 478 aaKnown RBP11.99□□□□□ -0.49
TRAPPC11-206ENST00000509857 TRIM33Q9UPN9 1127 aa11.99□□□□□ -0.49
TRAPPC11-206ENST00000509857 BAG6P46379 1132 aa11.98□□□□□ -0.49
TRAPPC11-206ENST00000509857 KIAA0319Q5VV43 1072 aa11.98□□□□□ -0.49
TRAPPC11-206ENST00000509857 CEP135Q66GS9 1140 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms