RNA–Protein interactions for RNA: ENST00000509400.5

SIL1-212, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 4

Gene SIL1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-212ENST00000509400 SEC31BQ9NQW1 1179 aa14.26□□□□□ -0.13
SIL1-212ENST00000509400 LTBP1Q14766 1721 aa14.25□□□□□ -0.13
SIL1-212ENST00000509400 RASSF10A6NK89 507 aa14.25□□□□□ -0.13
SIL1-212ENST00000509400 CSF1RP07333 972 aa14.25□□□□□ -0.13
SIL1-212ENST00000509400 UBTFL1P0CB47 393 aaPredicted RBP14.25□□□□□ -0.13
SIL1-212ENST00000509400 HSPA8P11142 646 aaKnown RBP14.25□□□□□ -0.13
SIL1-212ENST00000509400 EPHX2P34913 555 aa14.25□□□□□ -0.13
SIL1-212ENST00000509400 CTSWP56202 376 aa14.25□□□□□ -0.13
SIL1-212ENST00000509400 LMBR1LQ6UX01 489 aa14.25□□□□□ -0.13
SIL1-212ENST00000509400 SLC51AQ86UW1 340 aa14.25□□□□□ -0.13
SIL1-212ENST00000509400 CRBNQ96SW2 442 aa14.25□□□□□ -0.13
SIL1-212ENST00000509400 BICC1Q9H694 974 aaKnown RBP14.25□□□□□ -0.13
SIL1-212ENST00000509400 HACL1Q9UJ83 578 aa14.25□□□□□ -0.13
SIL1-212ENST00000509400 CLEC11AQ9Y240 323 aa14.25□□□□□ -0.13
SIL1-212ENST00000509400 LRRFIP2Q9Y608 721 aaKnown RBP14.25□□□□□ -0.13
SIL1-212ENST00000509400 FZD9O00144 591 aa14.24□□□□□ -0.13
SIL1-212ENST00000509400 IRX6P78412 446 aaPredicted RBP14.24□□□□□ -0.13
SIL1-212ENST00000509400 FMR1Q06787 632 aaKnown RBP eCLIP14.24□□□□□ -0.13
SIL1-212ENST00000509400 CNTROBQ8N137 903 aa14.24□□□□□ -0.13
SIL1-212ENST00000509400 AIDAQ96BJ3 306 aa14.24□□□□□ -0.13
SIL1-212ENST00000509400 GREM2Q9H772 168 aa14.24□□□□□ -0.13
SIL1-212ENST00000509400 C1orf115Q9H7X2 142 aa14.24□□□□□ -0.13
SIL1-212ENST00000509400 GNAI3P08754 354 aa14.23□□□□□ -0.13
SIL1-212ENST00000509400 HOXA10P31260 410 aaPredicted RBP14.23□□□□□ -0.13
SIL1-212ENST00000509400 RPGRQ92834 1020 aaKnown RBP14.23□□□□□ -0.13
SIL1-212ENST00000509400 CELF1Q92879 486 aaKnown RBP14.23□□□□□ -0.13
SIL1-212ENST00000509400 CHMP3Q9Y3E7 222 aa14.23□□□□□ -0.13
SIL1-212ENST00000509400 CENPBP07199 599 aaPredicted RBP14.22□□□□□ -0.13
SIL1-212ENST00000509400 HSP90B1P14625 803 aaKnown RBP14.22□□□□□ -0.13
SIL1-212ENST00000509400 IARSP41252 1262 aaKnown RBP14.22□□□□□ -0.13
SIL1-212ENST00000509400 DEFB115Q30KQ5 88 aa14.22□□□□□ -0.13
SIL1-212ENST00000509400 FAM161AQ3B820 660 aa14.22□□□□□ -0.13
SIL1-212ENST00000509400 RABL6Q3YEC7 729 aaPredicted RBP14.22□□□□□ -0.13
SIL1-212ENST00000509400 CCDC152Q4G0S7 254 aa14.22□□□□□ -0.13
SIL1-212ENST00000509400 DDX46Q7L014 1031 aaKnown RBP14.22□□□□□ -0.13
SIL1-212ENST00000509400 RTKN2Q8IZC4 609 aa14.22□□□□□ -0.13
SIL1-212ENST00000509400 RBM17Q96I25 401 aaKnown RBP14.22□□□□□ -0.13
SIL1-212ENST00000509400 CRAMP1Q96RY5 1269 aa14.22□□□□□ -0.13
SIL1-212ENST00000509400 ZBTB40Q9NUA8 1239 aa14.22□□□□□ -0.13
SIL1-212ENST00000509400 DDX19BQ9UMR2 479 aa14.22□□□□□ -0.13
SIL1-212ENST00000509400 RIC1Q4ADV7 1423 aa14.22□□□□□ -0.13
SIL1-212ENST00000509400 WDR33Q9C0J8 1336 aaKnown RBP14.21□□□□□ -0.13
SIL1-212ENST00000509400 GNAI2P04899 355 aa14.21□□□□□ -0.13
SIL1-212ENST00000509400 ANKRD36CQ5JPF3 1778 aa14.21□□□□□ -0.13
SIL1-212ENST00000509400 TNRC18O15417 2968 aaPredicted RBP14.21□□□□□ -0.14
SIL1-212ENST00000509400 ITGA6P23229 1130 aa14.2□□□□□ -0.14
SIL1-212ENST00000509400 ALDH1B1P30837 517 aa14.2□□□□□ -0.14
SIL1-212ENST00000509400 GRAPQ13588 217 aa14.2□□□□□ -0.14
SIL1-212ENST00000509400 GPC2Q8N158 579 aa14.2□□□□□ -0.14
SIL1-212ENST00000509400 EXOC6Q8TAG9 804 aa14.2□□□□□ -0.14
SIL1-212ENST00000509400 GRAPLQ8TC17 118 aaPredicted RBP14.2□□□□□ -0.14
SIL1-212ENST00000509400 ABHD8Q96I13 439 aa14.2□□□□□ -0.14
SIL1-212ENST00000509400 ZNF594Q96JF6 807 aaPredicted RBP14.2□□□□□ -0.14
SIL1-212ENST00000509400 THSD7BQ9C0I4 1608 aa14.19□□□□□ -0.14
SIL1-212ENST00000509400 RFX5P48382 616 aaPredicted RBP14.19□□□□□ -0.14
SIL1-212ENST00000509400 RPS8P62241 208 aaKnown RBP14.19□□□□□ -0.14
SIL1-212ENST00000509400 PNMA8AQ86V59 439 aaPredicted RBP14.19□□□□□ -0.14
SIL1-212ENST00000509400 PNMA6EA0A0J9YXQ4 647 aa14.18□□□□□ -0.14
SIL1-212ENST00000509400 ANKRD18BA2A2Z9 1011 aa14.18□□□□□ -0.14
SIL1-212ENST00000509400 SLC34A2O95436 690 aa14.18□□□□□ -0.14
SIL1-212ENST00000509400 EPS15P42566 896 aa14.18□□□□□ -0.14
SIL1-212ENST00000509400 SCNN1DP51172 638 aa14.18□□□□□ -0.14
SIL1-212ENST00000509400 IFIT5Q13325 482 aaKnown RBP14.18□□□□□ -0.14
SIL1-212ENST00000509400 KLHDC4Q8TBB5 520 aa14.18□□□□□ -0.14
SIL1-212ENST00000509400 PSMD1Q99460 953 aa14.18□□□□□ -0.14
SIL1-212ENST00000509400 ABT1Q9ULW3 272 aaKnown RBP14.18□□□□□ -0.14
SIL1-212ENST00000509400 HDAC5Q9UQL6 1122 aa14.18□□□□□ -0.14
SIL1-212ENST00000509400 GJA3Q9Y6H8 435 aa14.18□□□□□ -0.14
SIL1-212ENST00000509400 TRAF5O00463 557 aa14.17□□□□□ -0.14
SIL1-212ENST00000509400 BBOX1O75936 387 aa14.17□□□□□ -0.14
SIL1-212ENST00000509400 ATP8B2P98198 1209 aa14.17□□□□□ -0.14
SIL1-212ENST00000509400 CST9Q5W186 159 aa14.17□□□□□ -0.14
SIL1-212ENST00000509400 PA2G4Q9UQ80 394 aaKnown RBP14.17□□□□□ -0.14
SIL1-212ENST00000509400 PPEF1O14829 653 aaPredicted RBP14.16□□□□□ -0.14
SIL1-212ENST00000509400 MAP2K1Q02750 393 aaPredicted RBP14.16□□□□□ -0.14
SIL1-212ENST00000509400 CCDC57Q2TAC2 916 aa14.16□□□□□ -0.14
SIL1-212ENST00000509400 CYP4F22Q6NT55 531 aa14.16□□□□□ -0.14
SIL1-212ENST00000509400 CEP85Q6P2H3 762 aa14.16□□□□□ -0.14
SIL1-212ENST00000509400 ANKRD18AQ8IVF6 992 aa14.16□□□□□ -0.14
SIL1-212ENST00000509400 SIRT2Q8IXJ6 389 aa14.16□□□□□ -0.14
SIL1-212ENST00000509400 CAPNS2Q96L46 248 aa14.16□□□□□ -0.14
SIL1-212ENST00000509400 CDC5LQ99459 802 aaKnown RBP14.16□□□□□ -0.14
SIL1-212ENST00000509400 PUS3Q9BZE2 481 aaKnown RBP14.16□□□□□ -0.14
SIL1-212ENST00000509400 PCDHB15Q9Y5E8 787 aa14.16□□□□□ -0.14
SIL1-212ENST00000509400 RTL9Q8NET4 1388 aa14.16□□□□□ -0.14
SIL1-212ENST00000509400 COL4A1P02462 1669 aa14.16□□□□□ -0.14
SIL1-212ENST00000509400 TRPM7Q96QT4 1865 aa14.16□□□□□ -0.14
SIL1-212ENST00000509400 SRGAP3O43295 1099 aa14.15□□□□□ -0.14
SIL1-212ENST00000509400 PTPN12Q05209 780 aaKnown RBP14.15□□□□□ -0.14
SIL1-212ENST00000509400 MTX1Q13505 466 aa14.15□□□□□ -0.14
SIL1-212ENST00000509400 SP8Q8IXZ3 490 aa14.15□□□□□ -0.14
SIL1-212ENST00000509400 JDP2Q8WYK2 163 aa14.15□□□□□ -0.14
SIL1-212ENST00000509400 CHMP4BQ9H444 224 aaKnown RBP14.15□□□□□ -0.14
SIL1-212ENST00000509400 TSKSQ9UJT2 592 aa14.15□□□□□ -0.14
SIL1-212ENST00000509400 ATP6V0A2Q9Y487 856 aa14.15□□□□□ -0.14
SIL1-212ENST00000509400 AOC2O75106 756 aa14.14□□□□□ -0.15
SIL1-212ENST00000509400 IGHMBP2P38935 993 aaKnown RBP14.14□□□□□ -0.15
SIL1-212ENST00000509400 EIF6P56537 245 aaKnown RBP14.14□□□□□ -0.15
SIL1-212ENST00000509400 POLA2Q14181 598 aa14.14□□□□□ -0.15
SIL1-212ENST00000509400 LRRC24Q50LG9 513 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms