RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 GPR108Q9NPR9 543 aa12.79□□□□□ -0.36
RFC1-211ENST00000509084 CNNM1Q9NRU3 951 aa12.79□□□□□ -0.36
RFC1-211ENST00000509084 C10orf71Q711Q0 1435 aa12.79□□□□□ -0.36
RFC1-211ENST00000509084 C3orf67Q6ZVT6 689 aa12.78□□□□□ -0.36
RFC1-211ENST00000509084 RBM17Q96I25 401 aaKnown RBP12.78□□□□□ -0.36
RFC1-211ENST00000509084 ZNF594Q96JF6 807 aaPredicted RBP12.78□□□□□ -0.36
RFC1-211ENST00000509084 MROH5Q6ZUA9 1318 aa12.78□□□□□ -0.36
RFC1-211ENST00000509084 SASH1O94885 1247 aa12.77□□□□□ -0.37
RFC1-211ENST00000509084 PRR29P0C7W0 189 aa12.77□□□□□ -0.37
RFC1-211ENST00000509084 NPR1P16066 1061 aa12.77□□□□□ -0.37
RFC1-211ENST00000509084 HOXA10P31260 410 aaPredicted RBP12.77□□□□□ -0.37
RFC1-211ENST00000509084 GRAPQ13588 217 aa12.77□□□□□ -0.37
RFC1-211ENST00000509084 ATG9AQ7Z3C6 839 aa12.77□□□□□ -0.37
RFC1-211ENST00000509084 TMC4Q7Z404 712 aa12.77□□□□□ -0.37
RFC1-211ENST00000509084 CCDC24Q8N4L8 307 aa12.77□□□□□ -0.37
RFC1-211ENST00000509084 GRAPLQ8TC17 118 aaPredicted RBP12.77□□□□□ -0.37
RFC1-211ENST00000509084 GPATCH3Q96I76 525 aa12.77□□□□□ -0.37
RFC1-211ENST00000509084 PDGFDQ9GZP0 370 aaPredicted RBP12.77□□□□□ -0.37
RFC1-211ENST00000509084 SEC31BQ9NQW1 1179 aa12.77□□□□□ -0.37
RFC1-211ENST00000509084 CEP126Q9P2H0 1117 aa12.77□□□□□ -0.37
RFC1-211ENST00000509084 AKAP2Q9Y2D5 859 aa12.77□□□□□ -0.37
RFC1-211ENST00000509084 SPEF2Q9C093 1822 aa12.76□□□□□ -0.37
RFC1-211ENST00000509084 ZBTB7AO95365 584 aa12.76□□□□□ -0.37
RFC1-211ENST00000509084 RPS8P62241 208 aaKnown RBP12.76□□□□□ -0.37
RFC1-211ENST00000509084 LRRC24Q50LG9 513 aa12.76□□□□□ -0.37
RFC1-211ENST00000509084 METTL24Q5JXM2 366 aa12.76□□□□□ -0.37
RFC1-211ENST00000509084 CRAMP1Q96RY5 1269 aa12.76□□□□□ -0.37
RFC1-211ENST00000509084 IL1RAPL2Q9NP60 686 aa12.76□□□□□ -0.37
RFC1-211ENST00000509084 BSDC1Q9NW68 430 aaPredicted RBP12.76□□□□□ -0.37
RFC1-211ENST00000509084 RIPOR2Q9Y4F9 1068 aa12.76□□□□□ -0.37
RFC1-211ENST00000509084 AOX1Q06278 1338 aa12.76□□□□□ -0.37
RFC1-211ENST00000509084 ZNF609O15014 1411 aa12.75□□□□□ -0.37
RFC1-211ENST00000509084 SMARCA5O60264 1052 aaPredicted RBP12.75□□□□□ -0.37
RFC1-211ENST00000509084 IFIT2P09913 472 aaKnown RBP12.75□□□□□ -0.37
RFC1-211ENST00000509084 ALDH1B1P30837 517 aa12.75□□□□□ -0.37
RFC1-211ENST00000509084 RGS3P49796 1198 aa12.75□□□□□ -0.37
RFC1-211ENST00000509084 TFCP2Q12800 502 aa12.75□□□□□ -0.37
RFC1-211ENST00000509084 TNNI3KQ59H18 835 aa12.75□□□□□ -0.37
RFC1-211ENST00000509084 MASTLQ96GX5 879 aa12.75□□□□□ -0.37
RFC1-211ENST00000509084 PUS3Q9BZE2 481 aaKnown RBP12.75□□□□□ -0.37
RFC1-211ENST00000509084 KIF13BQ9NQT8 1826 aa12.75□□□□□ -0.37
RFC1-211ENST00000509084 FPGT-TNNI3KV9GXZ4 949 aa12.75□□□□□ -0.37
RFC1-211ENST00000509084 COL11A2P13942 1736 aaPredicted RBP12.74□□□□□ -0.37
RFC1-211ENST00000509084 TTC41PQ6P2S7 1318 aa12.74□□□□□ -0.37
RFC1-211ENST00000509084 PSDA5PKW4 1024 aaPredicted RBP12.74□□□□□ -0.37
RFC1-211ENST00000509084 H0YIN7 160 aa12.74□□□□□ -0.37
RFC1-211ENST00000509084 BBOX1O75936 387 aa12.74□□□□□ -0.37
RFC1-211ENST00000509084 SRGNP10124 158 aa12.74□□□□□ -0.37
RFC1-211ENST00000509084 MX1P20591 662 aa12.74□□□□□ -0.37
RFC1-211ENST00000509084 PDE4AP27815 886 aa12.74□□□□□ -0.37
RFC1-211ENST00000509084 STYK1Q6J9G0 422 aa12.74□□□□□ -0.37
RFC1-211ENST00000509084 AACSQ86V21 672 aa12.74□□□□□ -0.37
RFC1-211ENST00000509084 CELF1Q92879 486 aaKnown RBP12.74□□□□□ -0.37
RFC1-211ENST00000509084 ANKRD2Q9GZV1 360 aa12.74□□□□□ -0.37
RFC1-211ENST00000509084 OSBPL3Q9H4L5 887 aa12.74□□□□□ -0.37
RFC1-211ENST00000509084 SALL3Q9BXA9 1300 aa12.73□□□□□ -0.37
RFC1-211ENST00000509084 PDE8BO95263 885 aa12.73□□□□□ -0.37
RFC1-211ENST00000509084 PUM3Q15397 648 aaKnown RBP12.73□□□□□ -0.37
RFC1-211ENST00000509084 C2CD5Q86YS7 1000 aa12.73□□□□□ -0.37
RFC1-211ENST00000509084 A0A1B0GUL6 1792 aa12.73□□□□□ -0.37
RFC1-211ENST00000509084 DLEC1Q9Y238 1755 aa12.73□□□□□ -0.37
RFC1-211ENST00000509084 LRRC37AA6NMS7 1700 aa12.73□□□□□ -0.37
RFC1-211ENST00000509084 ARAP2Q8WZ64 1704 aa12.73□□□□□ -0.37
RFC1-211ENST00000509084 ERC2O15083 957 aa12.72□□□□□ -0.37
RFC1-211ENST00000509084 PDE1AP54750 535 aa12.72□□□□□ -0.37
RFC1-211ENST00000509084 CHRNDQ07001 517 aa12.72□□□□□ -0.37
RFC1-211ENST00000509084 ATP2B3Q16720 1220 aa12.72□□□□□ -0.37
RFC1-211ENST00000509084 PLEKHM2Q8IWE5 1019 aa12.72□□□□□ -0.37
RFC1-211ENST00000509084 VGLL2Q8N8G2 317 aa12.72□□□□□ -0.37
RFC1-211ENST00000509084 CNKSR1Q969H4 720 aa12.72□□□□□ -0.37
RFC1-211ENST00000509084 EAF2Q96CJ1 260 aaPredicted RBP12.72□□□□□ -0.37
RFC1-211ENST00000509084 TMX4Q9H1E5 349 aaPredicted RBP12.72□□□□□ -0.37
RFC1-211ENST00000509084 STAP2Q9UGK3 403 aa12.72□□□□□ -0.37
RFC1-211ENST00000509084 A0A1B0GUL7 405 aa12.71□□□□□ -0.37
RFC1-211ENST00000509084 PPEF1O14829 653 aaPredicted RBP12.71□□□□□ -0.37
RFC1-211ENST00000509084 IFIT1P09914 478 aaKnown RBP12.71□□□□□ -0.37
RFC1-211ENST00000509084 SLC5A1P13866 664 aa12.71□□□□□ -0.37
RFC1-211ENST00000509084 TGFB2P61812 414 aa12.71□□□□□ -0.37
RFC1-211ENST00000509084 UBE4AQ14139 1066 aa12.71□□□□□ -0.37
RFC1-211ENST00000509084 LPIN2Q92539 896 aa12.71□□□□□ -0.37
RFC1-211ENST00000509084 SGIP1Q9BQI5 828 aa12.71□□□□□ -0.37
RFC1-211ENST00000509084 SPON1Q9HCB6 807 aa12.71□□□□□ -0.37
RFC1-211ENST00000509084 ECHDC1Q9NTX5 307 aa12.71□□□□□ -0.37
RFC1-211ENST00000509084 MINPP1Q9UNW1 487 aa12.71□□□□□ -0.37
RFC1-211ENST00000509084 COL4A1P02462 1669 aa12.7□□□□□ -0.38
RFC1-211ENST00000509084 TAF1P21675 1872 aa12.7□□□□□ -0.38
RFC1-211ENST00000509084 XDHP47989 1333 aa12.7□□□□□ -0.38
RFC1-211ENST00000509084 GLRX3O76003 335 aaKnown RBP12.7□□□□□ -0.38
RFC1-211ENST00000509084 BMP2KLQ5H9B9 411 aa12.7□□□□□ -0.38
RFC1-211ENST00000509084 C16orf71Q8IYS4 520 aaPredicted RBP12.7□□□□□ -0.38
RFC1-211ENST00000509084 BCL11AQ9H165 835 aa12.7□□□□□ -0.38
RFC1-211ENST00000509084 CD2APQ9Y5K6 639 aa12.7□□□□□ -0.38
RFC1-211ENST00000509084 PRKAR2AP13861 404 aaKnown RBP12.69□□□□□ -0.38
RFC1-211ENST00000509084 FGFR2P21802 821 aa12.69□□□□□ -0.38
RFC1-211ENST00000509084 PTGER2P43116 358 aa12.69□□□□□ -0.38
RFC1-211ENST00000509084 KCNJ4P48050 445 aa12.69□□□□□ -0.38
RFC1-211ENST00000509084 CCDC158Q5M9N0 1113 aa12.69□□□□□ -0.38
RFC1-211ENST00000509084 TTC22Q5TAA0 569 aa12.69□□□□□ -0.38
RFC1-211ENST00000509084 CC2D2BQ6DHV5 1058 aa12.69□□□□□ -0.38
RFC1-211ENST00000509084 SKAP1Q86WV1 359 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms