RNA–Protein interactions for RNA: ENST00000509048.1

RETREG1-204, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 807 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-204ENST00000509048 CDC5LQ99459 802 aaKnown RBP29.35■■■□□ 2.29
RETREG1-204ENST00000509048 ANKIB1Q9P2G1 1089 aa29.35■■■□□ 2.29
RETREG1-204ENST00000509048 MKRN1Q9UHC7 482 aaKnown RBP29.35■■■□□ 2.29
RETREG1-204ENST00000509048 CNTNAP1P78357 1384 aa29.35■■■□□ 2.29
RETREG1-204ENST00000509048 GPR101Q96P66 508 aaPredicted RBP29.34■■■□□ 2.29
RETREG1-204ENST00000509048 BCL2L13Q9BXK5 485 aa29.34■■■□□ 2.29
RETREG1-204ENST00000509048 GGA1Q9UJY5 639 aa29.34■■■□□ 2.29
RETREG1-204ENST00000509048 ECE2O60344 883 aa29.33■■■□□ 2.29
RETREG1-204ENST00000509048 UFL1O94874 794 aa29.33■■■□□ 2.29
RETREG1-204ENST00000509048 CASP7P55210 303 aa29.33■■■□□ 2.29
RETREG1-204ENST00000509048 PLA2G12BQ9BX93 195 aa29.33■■■□□ 2.29
RETREG1-204ENST00000509048 ZC3H12CQ9C0D7 883 aaKnown RBP29.33■■■□□ 2.29
RETREG1-204ENST00000509048 GREM2Q9H772 168 aa29.33■■■□□ 2.29
RETREG1-204ENST00000509048 PSMD14O00487 310 aa29.32■■■□□ 2.28
RETREG1-204ENST00000509048 XDHP47989 1333 aa29.31■■■□□ 2.28
RETREG1-204ENST00000509048 DOK7Q18PE1 504 aa29.31■■■□□ 2.28
RETREG1-204ENST00000509048 DPF2Q92785 391 aa29.31■■■□□ 2.28
RETREG1-204ENST00000509048 BSDC1Q9NW68 430 aaPredicted RBP29.31■■■□□ 2.28
RETREG1-204ENST00000509048 CNOT7Q9UIV1 285 aaKnown RBP29.31■■■□□ 2.28
RETREG1-204ENST00000509048 PGAP2Q9UHJ9 254 aa29.3■■■□□ 2.28
RETREG1-204ENST00000509048 ZBTB12Q9Y330 459 aaPredicted RBP29.3■■■□□ 2.28
RETREG1-204ENST00000509048 KCNQ5Q9NR82 932 aa29.29■■■□□ 2.28
RETREG1-204ENST00000509048 HIRAP54198 1017 aaPredicted RBP29.28■■■□□ 2.28
RETREG1-204ENST00000509048 MICALL2Q8IY33 904 aa29.28■■■□□ 2.28
RETREG1-204ENST00000509048 TRPM4Q8TD43 1214 aa29.28■■■□□ 2.28
RETREG1-204ENST00000509048 ZC3H15Q8WU90 426 aaKnown RBP29.28■■■□□ 2.28
RETREG1-204ENST00000509048 MINPP1Q9UNW1 487 aa29.28■■■□□ 2.28
RETREG1-204ENST00000509048 SCN9AQ15858 1988 aa29.27■■■□□ 2.28
RETREG1-204ENST00000509048 SHTN1A0MZ66 631 aa29.27■■■□□ 2.28
RETREG1-204ENST00000509048 H7C1D1 291 aa29.27■■■□□ 2.28
RETREG1-204ENST00000509048 CSF1RP07333 972 aa29.27■■■□□ 2.28
RETREG1-204ENST00000509048 ATP2B4P23634 1241 aa29.27■■■□□ 2.28
RETREG1-204ENST00000509048 RPS12P25398 132 aaKnown RBP29.27■■■□□ 2.28
RETREG1-204ENST00000509048 BEND3Q5T5X7 828 aa29.27■■■□□ 2.28
RETREG1-204ENST00000509048 RASSF10A6NK89 507 aa29.26■■■□□ 2.27
RETREG1-204ENST00000509048 F6X3S4 739 aa29.26■■■□□ 2.27
RETREG1-204ENST00000509048 HSPA1AP0DMV8 641 aaKnown RBP29.26■■■□□ 2.27
RETREG1-204ENST00000509048 HSPA1BP0DMV9 641 aaKnown RBP29.26■■■□□ 2.27
RETREG1-204ENST00000509048 FMR1Q06787 632 aaKnown RBP eCLIP29.26■■■□□ 2.27
RETREG1-204ENST00000509048 SPEF2Q9C093 1822 aa29.25■■■□□ 2.27
RETREG1-204ENST00000509048 TRAF5O00463 557 aa29.25■■■□□ 2.27
RETREG1-204ENST00000509048 VIL1P09327 827 aaKnown RBP29.25■■■□□ 2.27
RETREG1-204ENST00000509048 VEGFBP49765 207 aa29.24■■■□□ 2.27
RETREG1-204ENST00000509048 TRPM7Q96QT4 1865 aa29.24■■■□□ 2.27
RETREG1-204ENST00000509048 ITGA6P23229 1130 aa29.23■■■□□ 2.27
RETREG1-204ENST00000509048 FAM161AQ3B820 660 aa29.23■■■□□ 2.27
RETREG1-204ENST00000509048 CST9Q5W186 159 aa29.23■■■□□ 2.27
RETREG1-204ENST00000509048 ZNF609O15014 1411 aa29.22■■■□□ 2.27
RETREG1-204ENST00000509048 G3V3G9 751 aa29.22■■■□□ 2.27
RETREG1-204ENST00000509048 IGHMBP2P38935 993 aaKnown RBP29.22■■■□□ 2.27
RETREG1-204ENST00000509048 DEFB115Q30KQ5 88 aa29.22■■■□□ 2.27
RETREG1-204ENST00000509048 DCAF8Q5TAQ9 597 aa29.22■■■□□ 2.27
RETREG1-204ENST00000509048 WTIPA6NIX2 430 aaPredicted RBP29.21■■■□□ 2.27
RETREG1-204ENST00000509048 ABT1Q9ULW3 272 aaKnown RBP29.21■■■□□ 2.27
RETREG1-204ENST00000509048 MED23Q9ULK4 1368 aa29.21■■■□□ 2.27
RETREG1-204ENST00000509048 PSME4Q14997 1843 aa29.2■■■□□ 2.27
RETREG1-204ENST00000509048 CCT4P50991 539 aaKnown RBP29.2■■■□□ 2.26
RETREG1-204ENST00000509048 SAMD7Q7Z3H4 446 aa29.2■■■□□ 2.26
RETREG1-204ENST00000509048 GLIS2Q9BZE0 524 aaPredicted RBP29.2■■■□□ 2.26
RETREG1-204ENST00000509048 E9PSI1 815 aa29.19■■■□□ 2.26
RETREG1-204ENST00000509048 EGFRP00533 1210 aa29.19■■■□□ 2.26
RETREG1-204ENST00000509048 FOXO4P98177 505 aa29.19■■■□□ 2.26
RETREG1-204ENST00000509048 PODNQ7Z5L7 613 aa29.19■■■□□ 2.26
RETREG1-204ENST00000509048 TBC1D10BQ4KMP7 808 aaPredicted RBP29.18■■■□□ 2.26
RETREG1-204ENST00000509048 CDC37L1Q7L3B6 337 aa29.18■■■□□ 2.26
RETREG1-204ENST00000509048 COL13A1Q5TAT6 717 aaPredicted RBP29.17■■■□□ 2.26
RETREG1-204ENST00000509048 RSBN1LQ6PCB5 846 aaPredicted RBP29.17■■■□□ 2.26
RETREG1-204ENST00000509048 MPHOSPH8Q99549 860 aa29.17■■■□□ 2.26
RETREG1-204ENST00000509048 LEMD3Q9Y2U8 911 aa29.17■■■□□ 2.26
RETREG1-204ENST00000509048 GRM8O00222 908 aa29.16■■■□□ 2.26
RETREG1-204ENST00000509048 AGBL3Q8NEM8 1001 aa29.16■■■□□ 2.26
RETREG1-204ENST00000509048 TLL2Q9Y6L7 1015 aa29.16■■■□□ 2.26
RETREG1-204ENST00000509048 ANKRD18BA2A2Z9 1011 aa29.15■■■□□ 2.26
RETREG1-204ENST00000509048 ALDH1L1O75891 902 aa29.15■■■□□ 2.26
RETREG1-204ENST00000509048 GMLQ99445 158 aa29.15■■■□□ 2.26
RETREG1-204ENST00000509048 ANKRD2Q9GZV1 360 aa29.15■■■□□ 2.26
RETREG1-204ENST00000509048 WDR33Q9C0J8 1336 aaKnown RBP29.15■■■□□ 2.26
RETREG1-204ENST00000509048 USP17L3A6NCW0 530 aa29.14■■■□□ 2.26
RETREG1-204ENST00000509048 USP17L4A6NCW7 530 aa29.14■■■□□ 2.26
RETREG1-204ENST00000509048 CELF2O95319 508 aaKnown RBP29.14■■■□□ 2.26
RETREG1-204ENST00000509048 SLFN5Q08AF3 891 aa29.14■■■□□ 2.26
RETREG1-204ENST00000509048 USP17L1Q7RTZ2 530 aa29.14■■■□□ 2.26
RETREG1-204ENST00000509048 ZNF280AP59817 542 aaPredicted RBP29.13■■■□□ 2.25
RETREG1-204ENST00000509048 IFIT5Q13325 482 aaKnown RBP29.13■■■□□ 2.25
RETREG1-204ENST00000509048 KIF4BQ2VIQ3 1234 aa29.13■■■□□ 2.25
RETREG1-204ENST00000509048 SLC4A10Q6U841 1118 aa29.13■■■□□ 2.25
RETREG1-204ENST00000509048 MRPL50Q8N5N7 158 aaKnown RBP29.13■■■□□ 2.25
RETREG1-204ENST00000509048 SRCIN1Q9C0H9 1055 aa29.13■■■□□ 2.25
RETREG1-204ENST00000509048 CCER2I3L3R5 266 aa29.12■■■□□ 2.25
RETREG1-204ENST00000509048 EPHA10Q5JZY3 1008 aa29.12■■■□□ 2.25
RETREG1-204ENST00000509048 TXNRD3Q86VQ6 643 aa29.12■■■□□ 2.25
RETREG1-204ENST00000509048 COA1Q9GZY4 146 aa29.12■■■□□ 2.25
RETREG1-204ENST00000509048 ZNF804BA4D1E1 1349 aa29.12■■■□□ 2.25
RETREG1-204ENST00000509048 CHRNDQ07001 517 aa29.11■■■□□ 2.25
RETREG1-204ENST00000509048 RBM26Q5T8P6 1007 aaKnown RBP29.11■■■□□ 2.25
RETREG1-204ENST00000509048 LMBR1LQ6UX01 489 aa29.11■■■□□ 2.25
RETREG1-204ENST00000509048 SAPCD2Q86UD0 394 aa29.11■■■□□ 2.25
RETREG1-204ENST00000509048 USP48Q86UV5 1035 aa29.11■■■□□ 2.25
RETREG1-204ENST00000509048 C9orf78Q9NZ63 289 aaPredicted RBP29.11■■■□□ 2.25
RETREG1-204ENST00000509048 THSD7BQ9C0I4 1608 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms