RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 IGHA2P01877 340 aa12.89□□□□□ -0.35
CHD1-205ENST00000508756 EIF2AK2P19525 551 aaKnown RBP12.89□□□□□ -0.35
CHD1-205ENST00000508756 SIK1P57059 783 aa12.89□□□□□ -0.35
CHD1-205ENST00000508756 PERM1Q5SV97 790 aa12.89□□□□□ -0.35
CHD1-205ENST00000508756 KANK3Q6NY19 840 aa12.89□□□□□ -0.35
CHD1-205ENST00000508756 ZNF417Q8TAU3 575 aa12.89□□□□□ -0.35
CHD1-205ENST00000508756 SNX29Q8TEQ0 813 aa12.89□□□□□ -0.35
CHD1-205ENST00000508756 NUDT8Q8WV74 236 aa12.89□□□□□ -0.35
CHD1-205ENST00000508756 ZNF587Q96SQ5 575 aaPredicted RBP12.89□□□□□ -0.35
CHD1-205ENST00000508756 CNTNAP5Q8WYK1 1306 aa12.88□□□□□ -0.35
CHD1-205ENST00000508756 PDE3BQ13370 1112 aa12.88□□□□□ -0.35
CHD1-205ENST00000508756 C20orf204Q6ZNR8 217 aa12.88□□□□□ -0.35
CHD1-205ENST00000508756 TMC7Q7Z402 723 aa12.88□□□□□ -0.35
CHD1-205ENST00000508756 MICALL1Q8N3F8 863 aa12.88□□□□□ -0.35
CHD1-205ENST00000508756 GZF1Q9H116 711 aaPredicted RBP12.88□□□□□ -0.35
CHD1-205ENST00000508756 PHACTR2O75167 634 aa12.87□□□□□ -0.35
CHD1-205ENST00000508756 CES1P23141 567 aa12.87□□□□□ -0.35
CHD1-205ENST00000508756 HYAL2Q12891 473 aa12.87□□□□□ -0.35
CHD1-205ENST00000508756 LPIN3Q9BQK8 851 aa12.87□□□□□ -0.35
CHD1-205ENST00000508756 EREGO14944 169 aa12.86□□□□□ -0.35
CHD1-205ENST00000508756 ELMSAN1Q6PJG2 1045 aa12.86□□□□□ -0.35
CHD1-205ENST00000508756 JPH1Q9HDC5 661 aaPredicted RBP12.86□□□□□ -0.35
CHD1-205ENST00000508756 ORC1Q13415 861 aa12.85□□□□□ -0.35
CHD1-205ENST00000508756 LINC00114Q6XXX2 140 aa12.85□□□□□ -0.35
CHD1-205ENST00000508756 NIF3L1Q9GZT8 377 aa12.85□□□□□ -0.35
CHD1-205ENST00000508756 SMG9Q9H0W8 520 aaKnown RBP12.85□□□□□ -0.35
CHD1-205ENST00000508756 KIF4AO95239 1232 aa12.84□□□□□ -0.35
CHD1-205ENST00000508756 GHRHP01286 108 aa12.84□□□□□ -0.35
CHD1-205ENST00000508756 PODNQ7Z5L7 613 aa12.84□□□□□ -0.35
CHD1-205ENST00000508756 NCAPG2Q86XI2 1143 aa12.84□□□□□ -0.35
CHD1-205ENST00000508756 MKL2Q9ULH7 1088 aa12.84□□□□□ -0.35
CHD1-205ENST00000508756 RGS9O75916 674 aaPredicted RBP12.83□□□□□ -0.36
CHD1-205ENST00000508756 PLD4Q96BZ4 506 aa12.83□□□□□ -0.36
CHD1-205ENST00000508756 DMRTB1Q96MA1 342 aa12.83□□□□□ -0.36
CHD1-205ENST00000508756 ZFYVE28Q9HCC9 887 aa12.83□□□□□ -0.36
CHD1-205ENST00000508756 SALL4Q9UJQ4 1053 aa12.83□□□□□ -0.36
CHD1-205ENST00000508756 LILRB5O75023 590 aa12.82□□□□□ -0.36
CHD1-205ENST00000508756 ACPPP15309 386 aa12.82□□□□□ -0.36
CHD1-205ENST00000508756 ATP11AP98196 1134 aa12.82□□□□□ -0.36
CHD1-205ENST00000508756 COL9A3Q14050 684 aaPredicted RBP12.82□□□□□ -0.36
CHD1-205ENST00000508756 BEND7Q8N7W2 519 aaPredicted RBP12.82□□□□□ -0.36
CHD1-205ENST00000508756 SCARF2Q96GP6 870 aaPredicted RBP12.82□□□□□ -0.36
CHD1-205ENST00000508756 FRRS1LQ9P0K9 344 aa12.82□□□□□ -0.36
CHD1-205ENST00000508756 POLR3DP05423 398 aaPredicted RBP12.81□□□□□ -0.36
CHD1-205ENST00000508756 USPL1Q5W0Q7 1092 aa12.81□□□□□ -0.36
CHD1-205ENST00000508756 PMEPA1Q969W9 287 aa12.81□□□□□ -0.36
CHD1-205ENST00000508756 SPACA7Q96KW9 195 aa12.81□□□□□ -0.36
CHD1-205ENST00000508756 PRDM6Q9NQX0 595 aa12.81□□□□□ -0.36
CHD1-205ENST00000508756 AFF1P51825 1210 aaKnown RBP12.8□□□□□ -0.36
CHD1-205ENST00000508756 CEP120Q8N960 986 aa12.8□□□□□ -0.36
CHD1-205ENST00000508756 TRIM11Q96F44 468 aa12.8□□□□□ -0.36
CHD1-205ENST00000508756 RBSNQ9H1K0 784 aa12.8□□□□□ -0.36
CHD1-205ENST00000508756 AMOTL2Q9Y2J4 779 aa12.8□□□□□ -0.36
CHD1-205ENST00000508756 ZBTB7CA1YPR0 619 aa12.79□□□□□ -0.36
CHD1-205ENST00000508756 GNB5O14775 395 aa12.79□□□□□ -0.36
CHD1-205ENST00000508756 ALKBH8Q96BT7 664 aaKnown RBP12.79□□□□□ -0.36
CHD1-205ENST00000508756 ASB16Q96NS5 453 aa12.79□□□□□ -0.36
CHD1-205ENST00000508756 RASSF4Q9H2L5 321 aa12.79□□□□□ -0.36
CHD1-205ENST00000508756 SUV39H2Q9H5I1 410 aa12.79□□□□□ -0.36
CHD1-205ENST00000508756 NID1P14543 1247 aa12.78□□□□□ -0.36
CHD1-205ENST00000508756 GRIK5Q16478 980 aa12.78□□□□□ -0.36
CHD1-205ENST00000508756 LATS2Q9NRM7 1088 aa12.78□□□□□ -0.36
CHD1-205ENST00000508756 TREHO43280 583 aa12.77□□□□□ -0.37
CHD1-205ENST00000508756 TRPA1O75762 1119 aa12.77□□□□□ -0.37
CHD1-205ENST00000508756 NEFLP07196 543 aa12.77□□□□□ -0.37
CHD1-205ENST00000508756 IRS1P35568 1242 aa12.77□□□□□ -0.37
CHD1-205ENST00000508756 ZSCAN29Q8IWY8 852 aaPredicted RBP12.77□□□□□ -0.37
CHD1-205ENST00000508756 TRIM33Q9UPN9 1127 aa12.77□□□□□ -0.37
CHD1-205ENST00000508756 EIF1AYO14602 144 aaKnown RBP12.76□□□□□ -0.37
CHD1-205ENST00000508756 DSC3Q14574 896 aa12.76□□□□□ -0.37
CHD1-205ENST00000508756 TTC9Q92623 222 aa12.76□□□□□ -0.37
CHD1-205ENST00000508756 CPNE3O75131 537 aaKnown RBP12.75□□□□□ -0.37
CHD1-205ENST00000508756 CEP135Q66GS9 1140 aa12.75□□□□□ -0.37
CHD1-205ENST00000508756 GDF6Q6KF10 455 aaPredicted RBP12.75□□□□□ -0.37
CHD1-205ENST00000508756 HHIPQ96QV1 700 aa12.75□□□□□ -0.37
CHD1-205ENST00000508756 PLVAPQ9BX97 442 aa12.75□□□□□ -0.37
CHD1-205ENST00000508756 PBX4Q9BYU1 374 aa12.75□□□□□ -0.37
CHD1-205ENST00000508756 EDN3P14138 238 aa12.74□□□□□ -0.37
CHD1-205ENST00000508756 CSRNP1Q96S65 589 aa12.74□□□□□ -0.37
CHD1-205ENST00000508756 DZANK1Q9NVP4 752 aa12.74□□□□□ -0.37
CHD1-205ENST00000508756 RNF225M0QZC1 329 aaPredicted RBP12.73□□□□□ -0.37
CHD1-205ENST00000508756 PLCB3Q01970 1234 aa12.73□□□□□ -0.37
CHD1-205ENST00000508756 PEAR1Q5VY43 1037 aaPredicted RBP12.73□□□□□ -0.37
CHD1-205ENST00000508756 ADAMTSL4Q6UY14 1074 aa12.73□□□□□ -0.37
CHD1-205ENST00000508756 GALNT12Q8IXK2 581 aa12.73□□□□□ -0.37
CHD1-205ENST00000508756 ZKSCAN3Q9BRR0 538 aa12.73□□□□□ -0.37
CHD1-205ENST00000508756 NFKBIEO00221 500 aa12.72□□□□□ -0.37
CHD1-205ENST00000508756 PIK3R2O00459 728 aa12.72□□□□□ -0.37
CHD1-205ENST00000508756 SMNDC1O75940 238 aaKnown RBP eCLIP12.72□□□□□ -0.37
CHD1-205ENST00000508756 COL8A1P27658 744 aa12.72□□□□□ -0.37
CHD1-205ENST00000508756 TRIM26Q12899 539 aaPredicted RBP12.72□□□□□ -0.37
CHD1-205ENST00000508756 OSMRQ99650 979 aa12.72□□□□□ -0.37
CHD1-205ENST00000508756 LACRTQ9GZZ8 138 aa12.72□□□□□ -0.37
CHD1-205ENST00000508756 DNAJC25Q9H1X3 360 aa12.72□□□□□ -0.37
CHD1-205ENST00000508756 CCDC27Q2M243 656 aa12.71□□□□□ -0.37
CHD1-205ENST00000508756 MSL1Q68DK7 614 aa12.71□□□□□ -0.37
CHD1-205ENST00000508756 DMRTC2Q8IXT2 367 aaPredicted RBP12.71□□□□□ -0.37
CHD1-205ENST00000508756 PNMA6FA0A0J9YX94 578 aa12.7□□□□□ -0.38
CHD1-205ENST00000508756 BAG6P46379 1132 aa12.7□□□□□ -0.38
CHD1-205ENST00000508756 GSK3AP49840 483 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms