RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 KCNQ4P56696 695 aa3.01□□□□□ -1.93
SMN2-208ENST00000508258 MLLT1Q03111 559 aaPredicted RBP3.01□□□□□ -1.93
SMN2-208ENST00000508258 DOC2BQ14184 412 aa3.01□□□□□ -1.93
SMN2-208ENST00000508258 MRPL58Q14197 206 aaKnown RBP3.01□□□□□ -1.93
SMN2-208ENST00000508258 C11orf91Q3C1V1 193 aa3.01□□□□□ -1.93
SMN2-208ENST00000508258 IER5Q5VY09 327 aa3.01□□□□□ -1.93
SMN2-208ENST00000508258 ALKBH2Q6NS38 261 aa3.01□□□□□ -1.93
SMN2-208ENST00000508258 PSAPL1Q6NUJ1 521 aa3.01□□□□□ -1.93
SMN2-208ENST00000508258 FAM35AQ86V20 835 aa3.01□□□□□ -1.93
SMN2-208ENST00000508258 CMTR1Q8N1G2 835 aaKnown RBP3.01□□□□□ -1.93
SMN2-208ENST00000508258 FAM129BQ96TA1 746 aa3.01□□□□□ -1.93
SMN2-208ENST00000508258 CCDC87Q9NVE4 849 aa3.01□□□□□ -1.93
SMN2-208ENST00000508258 SLC6A14Q9UN76 642 aa3.01□□□□□ -1.93
SMN2-208ENST00000508258 BCS1LQ9Y276 419 aa3.01□□□□□ -1.93
SMN2-208ENST00000508258 USP20Q9Y2K6 914 aa3.01□□□□□ -1.93
SMN2-208ENST00000508258 STARD13Q9Y3M8 1113 aa3.01□□□□□ -1.93
SMN2-208ENST00000508258 NDUFB5O43674 189 aa3□□□□□ -1.93
SMN2-208ENST00000508258 SASH3O75995 380 aa3□□□□□ -1.93
SMN2-208ENST00000508258 MICAL2O94851 1124 aa3□□□□□ -1.93
SMN2-208ENST00000508258 TARSP26639 723 aaKnown RBP3□□□□□ -1.93
SMN2-208ENST00000508258 GATA4P43694 442 aa3□□□□□ -1.93
SMN2-208ENST00000508258 RAC1P63000 192 aa3□□□□□ -1.93
SMN2-208ENST00000508258 GRIK4Q16099 956 aa3□□□□□ -1.93
SMN2-208ENST00000508258 LDLRAD1Q5T700 205 aa3□□□□□ -1.93
SMN2-208ENST00000508258 TREML1Q86YW5 311 aa3□□□□□ -1.93
SMN2-208ENST00000508258 ALKBH8Q96BT7 664 aaKnown RBP3□□□□□ -1.93
SMN2-208ENST00000508258 IFT43Q96FT9 208 aa3□□□□□ -1.93
SMN2-208ENST00000508258 NACC1Q96RE7 527 aa3□□□□□ -1.93
SMN2-208ENST00000508258 GSX2Q9BZM3 304 aa3□□□□□ -1.93
SMN2-208ENST00000508258 EFCC1Q9HA90 598 aa3□□□□□ -1.93
SMN2-208ENST00000508258 BRPF3Q9ULD4 1205 aa3□□□□□ -1.93
SMN2-208ENST00000508258 GPR182O15218 404 aa2.99□□□□□ -1.93
SMN2-208ENST00000508258 XYLBO75191 536 aa2.99□□□□□ -1.93
SMN2-208ENST00000508258 PRPF40AO75400 957 aaKnown RBP2.99□□□□□ -1.93
SMN2-208ENST00000508258 EIF2AK2P19525 551 aaKnown RBP2.99□□□□□ -1.93
SMN2-208ENST00000508258 BRD2P25440 801 aaKnown RBP2.99□□□□□ -1.93
SMN2-208ENST00000508258 INPP5BP32019 993 aa2.99□□□□□ -1.93
SMN2-208ENST00000508258 PLCB3Q01970 1234 aa2.99□□□□□ -1.93
SMN2-208ENST00000508258 EHHADHQ08426 723 aa2.99□□□□□ -1.93
SMN2-208ENST00000508258 PCSK7Q16549 785 aa2.99□□□□□ -1.93
SMN2-208ENST00000508258 ELMSAN1Q6PJG2 1045 aa2.99□□□□□ -1.93
SMN2-208ENST00000508258 HFE2Q6ZVN8 426 aa2.99□□□□□ -1.93
SMN2-208ENST00000508258 DHX32Q7L7V1 743 aaKnown RBP2.99□□□□□ -1.93
SMN2-208ENST00000508258 ATCAYQ86WG3 371 aa2.99□□□□□ -1.93
SMN2-208ENST00000508258 ETFBKMTQ8IXQ9 262 aa2.99□□□□□ -1.93
SMN2-208ENST00000508258 DMRTC2Q8IXT2 367 aaPredicted RBP2.99□□□□□ -1.93
SMN2-208ENST00000508258 GJD3Q8N144 294 aa2.99□□□□□ -1.93
SMN2-208ENST00000508258 ABTB2Q8N961 1025 aa2.99□□□□□ -1.93
SMN2-208ENST00000508258 DMRTB1Q96MA1 342 aa2.99□□□□□ -1.93
SMN2-208ENST00000508258 C8orf37Q96NL8 207 aa2.99□□□□□ -1.93
SMN2-208ENST00000508258 SEMA6BQ9H3T3 888 aa2.99□□□□□ -1.93
SMN2-208ENST00000508258 NAGPAQ9UK23 515 aa2.99□□□□□ -1.93
SMN2-208ENST00000508258 USP21Q9UK80 565 aa2.99□□□□□ -1.93
SMN2-208ENST00000508258 RTCBQ9Y3I0 505 aaKnown RBP2.99□□□□□ -1.93
SMN2-208ENST00000508258 LOC100996750A0A140TA64 210 aa2.98□□□□□ -1.93
SMN2-208ENST00000508258 LDHBP07195 334 aaKnown RBP2.98□□□□□ -1.93
SMN2-208ENST00000508258 PSAPP07602 524 aa2.98□□□□□ -1.93
SMN2-208ENST00000508258 NID1P14543 1247 aa2.98□□□□□ -1.93
SMN2-208ENST00000508258 MZF1P28698 734 aaPredicted RBP2.98□□□□□ -1.93
SMN2-208ENST00000508258 AFF1P51825 1210 aaKnown RBP2.98□□□□□ -1.93
SMN2-208ENST00000508258 FGD1P98174 961 aa2.98□□□□□ -1.93
SMN2-208ENST00000508258 PDE3BQ13370 1112 aa2.98□□□□□ -1.93
SMN2-208ENST00000508258 C20orf204Q6ZNR8 217 aa2.98□□□□□ -1.93
SMN2-208ENST00000508258 NSUN5Q96P11 429 aaKnown RBP2.98□□□□□ -1.93
SMN2-208ENST00000508258 MDFIQ99750 246 aa2.98□□□□□ -1.93
SMN2-208ENST00000508258 KRTAP4-6Q9BYQ5 205 aa2.98□□□□□ -1.93
SMN2-208ENST00000508258 BACH2Q9BYV9 841 aa2.98□□□□□ -1.93
SMN2-208ENST00000508258 SMG9Q9H0W8 520 aaKnown RBP2.98□□□□□ -1.93
SMN2-208ENST00000508258 RBSNQ9H1K0 784 aa2.98□□□□□ -1.93
SMN2-208ENST00000508258 PRDM6Q9NQX0 595 aa2.98□□□□□ -1.93
SMN2-208ENST00000508258 ZFATQ9P243 1243 aa2.98□□□□□ -1.93
SMN2-208ENST00000508258 DMGDHQ9UI17 866 aaKnown RBP2.98□□□□□ -1.93
SMN2-208ENST00000508258 POLIQ9UNA4 740 aa2.98□□□□□ -1.93
SMN2-208ENST00000508258 SHROOM4Q9ULL8 1493 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 A0A0A0MRY4 1105 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 SCO2A0A1W2PP80 73 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 ZBTB42B2RXF5 422 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 C9orf172C9J069 976 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 J3QW42 95 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 OPLAHO14841 1288 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 MAP3K6O95382 1288 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 GHRHP01286 108 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 PDGFAP04085 211 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 ELNP15502 786 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 GRNP28799 593 aaKnown RBP2.97□□□□□ -1.93
SMN2-208ENST00000508258 ZAP70P43403 619 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 USP5P45974 858 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 DAB2P98082 770 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 AAMPQ13685 434 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 COL9A3Q14050 684 aaPredicted RBP2.97□□□□□ -1.93
SMN2-208ENST00000508258 ENOX2Q16206 610 aaKnown RBP2.97□□□□□ -1.93
SMN2-208ENST00000508258 TSNAXIP1Q2TAA8 658 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 PERM1Q5SV97 790 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 GDF6Q6KF10 455 aaPredicted RBP2.97□□□□□ -1.93
SMN2-208ENST00000508258 SHISA2Q6UWI4 295 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 TMC4Q7Z404 712 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 WFDC8Q8IUA0 241 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 TMC1Q8TDI8 760 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 PIK3R5Q8WYR1 880 aa2.97□□□□□ -1.93
SMN2-208ENST00000508258 DUSP9Q99956 384 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms