RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 LRRC24Q50LG9 513 aa13.46□□□□□ -0.25
PROM1-207ENST00000508167 BCS1LQ9Y276 419 aa13.46□□□□□ -0.25
PROM1-207ENST00000508167 C6orf229H3BNL8 230 aa13.46□□□□□ -0.26
PROM1-207ENST00000508167 RAB11FIP3O75154 756 aa13.45□□□□□ -0.26
PROM1-207ENST00000508167 PTPN12Q05209 780 aaKnown RBP13.45□□□□□ -0.26
PROM1-207ENST00000508167 AACSQ86V21 672 aa13.45□□□□□ -0.26
PROM1-207ENST00000508167 MTX1Q13505 466 aa13.45□□□□□ -0.26
PROM1-207ENST00000508167 GRAPQ13588 217 aa13.45□□□□□ -0.26
PROM1-207ENST00000508167 GRAPLQ8TC17 118 aaPredicted RBP13.45□□□□□ -0.26
PROM1-207ENST00000508167 TAF5LO75529 589 aa13.45□□□□□ -0.26
PROM1-207ENST00000508167 DPEP1P16444 411 aa13.45□□□□□ -0.26
PROM1-207ENST00000508167 TBC1D9Q6ZT07 1266 aa13.45□□□□□ -0.26
PROM1-207ENST00000508167 RHPN1Q8TCX5 695 aa13.45□□□□□ -0.26
PROM1-207ENST00000508167 COPRSQ9NQ92 184 aa13.44□□□□□ -0.26
PROM1-207ENST00000508167 RGPD3A6NKT7 1758 aaPredicted RBP13.44□□□□□ -0.26
PROM1-207ENST00000508167 RGPD4Q7Z3J3 1758 aa13.44□□□□□ -0.26
PROM1-207ENST00000508167 TFCP2Q12800 502 aa13.44□□□□□ -0.26
PROM1-207ENST00000508167 OSBPL3Q9H4L5 887 aa13.44□□□□□ -0.26
PROM1-207ENST00000508167 BBOX1O75936 387 aa13.44□□□□□ -0.26
PROM1-207ENST00000508167 TTLL6Q8N841 843 aa13.44□□□□□ -0.26
PROM1-207ENST00000508167 GPATCH3Q96I76 525 aa13.44□□□□□ -0.26
PROM1-207ENST00000508167 CCDC8Q9H0W5 538 aaPredicted RBP13.44□□□□□ -0.26
PROM1-207ENST00000508167 CICQ96RK0 1608 aaPredicted RBP13.44□□□□□ -0.26
PROM1-207ENST00000508167 PPEF1O14829 653 aaPredicted RBP13.43□□□□□ -0.26
PROM1-207ENST00000508167 SRGNP10124 158 aa13.43□□□□□ -0.26
PROM1-207ENST00000508167 POLA2Q14181 598 aa13.43□□□□□ -0.26
PROM1-207ENST00000508167 TTC22Q5TAA0 569 aa13.43□□□□□ -0.26
PROM1-207ENST00000508167 PIM2Q9P1W9 311 aa13.43□□□□□ -0.26
PROM1-207ENST00000508167 AKAP2Q9Y2D5 859 aa13.43□□□□□ -0.26
PROM1-207ENST00000508167 CD2BP2O95400 341 aaKnown RBP13.43□□□□□ -0.26
PROM1-207ENST00000508167 NBR1Q14596 966 aa13.43□□□□□ -0.26
PROM1-207ENST00000508167 IFIT1P09914 478 aaKnown RBP13.42□□□□□ -0.26
PROM1-207ENST00000508167 CHRNDQ07001 517 aa13.42□□□□□ -0.26
PROM1-207ENST00000508167 ATP2B3Q16720 1220 aa13.42□□□□□ -0.26
PROM1-207ENST00000508167 C22orf23Q9BZE7 217 aa13.42□□□□□ -0.26
PROM1-207ENST00000508167 RREB1Q92766 1687 aa13.42□□□□□ -0.26
PROM1-207ENST00000508167 C21orf2O43822 256 aa13.42□□□□□ -0.26
PROM1-207ENST00000508167 DALRD3Q5D0E6 543 aaKnown RBP13.42□□□□□ -0.26
PROM1-207ENST00000508167 PRPF40BQ6NWY9 871 aaKnown RBP13.42□□□□□ -0.26
PROM1-207ENST00000508167 CRAMP1Q96RY5 1269 aa13.42□□□□□ -0.26
PROM1-207ENST00000508167 FHDC1Q9C0D6 1143 aaPredicted RBP13.42□□□□□ -0.26
PROM1-207ENST00000508167 ANKRD2Q9GZV1 360 aa13.42□□□□□ -0.26
PROM1-207ENST00000508167 BSDC1Q9NW68 430 aaPredicted RBP13.41□□□□□ -0.26
PROM1-207ENST00000508167 C4AP0C0L4 1744 aa13.41□□□□□ -0.26
PROM1-207ENST00000508167 SLC5A1P13866 664 aa13.41□□□□□ -0.26
PROM1-207ENST00000508167 TIMM10P62072 90 aa13.41□□□□□ -0.26
PROM1-207ENST00000508167 FBXW7Q969H0 707 aa13.41□□□□□ -0.26
PROM1-207ENST00000508167 MROH5Q6ZUA9 1318 aa13.41□□□□□ -0.26
PROM1-207ENST00000508167 UFL1O94874 794 aa13.41□□□□□ -0.26
PROM1-207ENST00000508167 TGFB2P61812 414 aa13.41□□□□□ -0.26
PROM1-207ENST00000508167 DPP8Q6V1X1 898 aaPredicted RBP13.41□□□□□ -0.26
PROM1-207ENST00000508167 CD2APQ9Y5K6 639 aa13.41□□□□□ -0.26
PROM1-207ENST00000508167 RFX5P48382 616 aaPredicted RBP13.4□□□□□ -0.26
PROM1-207ENST00000508167 MPNDQ8N594 471 aa13.4□□□□□ -0.26
PROM1-207ENST00000508167 SCN7AQ01118 1682 aa13.4□□□□□ -0.26
PROM1-207ENST00000508167 NFKBIBQ15653 356 aa13.4□□□□□ -0.26
PROM1-207ENST00000508167 CCDC158Q5M9N0 1113 aa13.4□□□□□ -0.26
PROM1-207ENST00000508167 RIMBP2O15034 1052 aa13.4□□□□□ -0.26
PROM1-207ENST00000508167 STYK1Q6J9G0 422 aa13.4□□□□□ -0.26
PROM1-207ENST00000508167 MINPP1Q9UNW1 487 aa13.4□□□□□ -0.26
PROM1-207ENST00000508167 DCAF8L1A6NGE4 600 aa13.39□□□□□ -0.27
PROM1-207ENST00000508167 SNAP23O00161 211 aa13.39□□□□□ -0.27
PROM1-207ENST00000508167 CAVIN4Q5BKX8 364 aa13.39□□□□□ -0.27
PROM1-207ENST00000508167 GGA1Q9UJY5 639 aa13.39□□□□□ -0.27
PROM1-207ENST00000508167 FBXO3Q9UK99 471 aa13.39□□□□□ -0.27
PROM1-207ENST00000508167 CIAO1O76071 339 aa13.39□□□□□ -0.27
PROM1-207ENST00000508167 PTGER2P43116 358 aa13.39□□□□□ -0.27
PROM1-207ENST00000508167 CRY2Q49AN0 593 aa13.39□□□□□ -0.27
PROM1-207ENST00000508167 TTC39AQ5SRH9 613 aa13.39□□□□□ -0.27
PROM1-207ENST00000508167 TRIM6-TRIM34B2RNG4 842 aa13.39□□□□□ -0.27
PROM1-207ENST00000508167 TMC4Q7Z404 712 aa13.39□□□□□ -0.27
PROM1-207ENST00000508167 A0A1B0GUL7 405 aa13.38□□□□□ -0.27
PROM1-207ENST00000508167 PDE8BO95263 885 aa13.38□□□□□ -0.27
PROM1-207ENST00000508167 PUM3Q15397 648 aaKnown RBP13.38□□□□□ -0.27
PROM1-207ENST00000508167 GPR162Q16538 588 aa13.38□□□□□ -0.27
PROM1-207ENST00000508167 ZC3H12CQ9C0D7 883 aaKnown RBP13.38□□□□□ -0.27
PROM1-207ENST00000508167 SASH1O94885 1247 aa13.38□□□□□ -0.27
PROM1-207ENST00000508167 MFAP1P55081 439 aaKnown RBP13.38□□□□□ -0.27
PROM1-207ENST00000508167 HOXA10P31260 410 aaPredicted RBP13.38□□□□□ -0.27
PROM1-207ENST00000508167 TNNI3KQ59H18 835 aa13.38□□□□□ -0.27
PROM1-207ENST00000508167 OLFM4Q6UX06 510 aa13.38□□□□□ -0.27
PROM1-207ENST00000508167 ERICH6Q7L0X2 663 aa13.38□□□□□ -0.27
PROM1-207ENST00000508167 GNL3LQ9NVN8 582 aaKnown RBP13.38□□□□□ -0.27
PROM1-207ENST00000508167 IQSEC3Q9UPP2 1182 aaPredicted RBP13.38□□□□□ -0.27
PROM1-207ENST00000508167 FPGT-TNNI3KV9GXZ4 949 aa13.38□□□□□ -0.27
PROM1-207ENST00000508167 TSHZ3Q63HK5 1081 aa13.37□□□□□ -0.27
PROM1-207ENST00000508167 RIPOR2Q9Y4F9 1068 aa13.37□□□□□ -0.27
PROM1-207ENST00000508167 SDSP20132 328 aa13.37□□□□□ -0.27
PROM1-207ENST00000508167 ATG9AQ7Z3C6 839 aa13.37□□□□□ -0.27
PROM1-207ENST00000508167 NLGN2Q8NFZ4 835 aa13.37□□□□□ -0.27
PROM1-207ENST00000508167 SNX21Q969T3 373 aa13.37□□□□□ -0.27
PROM1-207ENST00000508167 XDHP47989 1333 aa13.37□□□□□ -0.27
PROM1-207ENST00000508167 IL17RAQ96F46 866 aa13.37□□□□□ -0.27
PROM1-207ENST00000508167 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.37□□□□□ -0.27
PROM1-207ENST00000508167 BCORQ6W2J9 1755 aa13.37□□□□□ -0.27
PROM1-207ENST00000508167 ERC2O15083 957 aa13.36□□□□□ -0.27
PROM1-207ENST00000508167 SP8Q8IXZ3 490 aa13.36□□□□□ -0.27
PROM1-207ENST00000508167 DNAJC2Q99543 621 aaKnown RBP13.36□□□□□ -0.27
PROM1-207ENST00000508167 ATP6V0A2Q9Y487 856 aa13.36□□□□□ -0.27
PROM1-207ENST00000508167 ANKRD36CQ5JPF3 1778 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms