RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 CDC37L1Q7L3B6 337 aa17.27■□□□□ 0.36
DDX41-208ENST00000507955 ZSCAN31Q96LW9 406 aaPredicted RBP17.27■□□□□ 0.36
DDX41-208ENST00000507955 SH2B1Q9NRF2 756 aaPredicted RBP17.27■□□□□ 0.36
DDX41-208ENST00000507955 PAPPAQ13219 1627 aa17.27■□□□□ 0.35
DDX41-208ENST00000507955 MBD3O95983 291 aa17.27■□□□□ 0.35
DDX41-208ENST00000507955 USPL1Q5W0Q7 1092 aa17.27■□□□□ 0.35
DDX41-208ENST00000507955 CHST3Q7LGC8 479 aa17.27■□□□□ 0.35
DDX41-208ENST00000507955 NEK1Q96PY6 1258 aa17.27■□□□□ 0.35
DDX41-208ENST00000507955 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.27■□□□□ 0.35
DDX41-208ENST00000507955 CEP126Q9P2H0 1117 aa17.27■□□□□ 0.35
DDX41-208ENST00000507955 FAM177BA6PVY3 158 aa17.26■□□□□ 0.35
DDX41-208ENST00000507955 JAK2O60674 1132 aa17.26■□□□□ 0.35
DDX41-208ENST00000507955 STARD3NLO95772 234 aa17.26■□□□□ 0.35
DDX41-208ENST00000507955 TTLL5Q6EMB2 1281 aa17.26■□□□□ 0.35
DDX41-208ENST00000507955 Q6ZUG5 572 aa17.26■□□□□ 0.35
DDX41-208ENST00000507955 UBE2Q2Q8WVN8 375 aa17.26■□□□□ 0.35
DDX41-208ENST00000507955 TAF7LQ5H9L4 462 aa17.26■□□□□ 0.35
DDX41-208ENST00000507955 JCADQ9P266 1359 aa17.25■□□□□ 0.35
DDX41-208ENST00000507955 GORABQ5T7V8 394 aa17.25■□□□□ 0.35
DDX41-208ENST00000507955 XAGE2Q96GT9 111 aa17.25■□□□□ 0.35
DDX41-208ENST00000507955 GREM2Q9H772 168 aa17.25■□□□□ 0.35
DDX41-208ENST00000507955 ACSBG1Q96GR2 724 aa17.25■□□□□ 0.35
DDX41-208ENST00000507955 M0R2C6 588 aa17.24■□□□□ 0.35
DDX41-208ENST00000507955 CYP19A1P11511 503 aaPredicted RBP17.24■□□□□ 0.35
DDX41-208ENST00000507955 DDX11Q96FC9 970 aa17.24■□□□□ 0.35
DDX41-208ENST00000507955 EXOC5O00471 708 aa17.24■□□□□ 0.35
DDX41-208ENST00000507955 FOSBP53539 338 aa17.24■□□□□ 0.35
DDX41-208ENST00000507955 BRF1Q92994 677 aa17.24■□□□□ 0.35
DDX41-208ENST00000507955 HMG20BQ9P0W2 317 aa17.24■□□□□ 0.35
DDX41-208ENST00000507955 HSP90B1P14625 803 aaKnown RBP17.23■□□□□ 0.35
DDX41-208ENST00000507955 IFIT5Q13325 482 aaKnown RBP17.23■□□□□ 0.35
DDX41-208ENST00000507955 GIGYF2Q6Y7W6 1299 aaKnown RBP17.23■□□□□ 0.35
DDX41-208ENST00000507955 NLRP10Q86W26 655 aa17.23■□□□□ 0.35
DDX41-208ENST00000507955 ZBTB38Q8NAP3 1195 aaPredicted RBP17.23■□□□□ 0.35
DDX41-208ENST00000507955 OSBP2Q969R2 916 aa17.23■□□□□ 0.35
DDX41-208ENST00000507955 MAST3O60307 1309 aa17.23■□□□□ 0.35
DDX41-208ENST00000507955 MAP3K15Q6ZN16 1313 aa17.23■□□□□ 0.35
DDX41-208ENST00000507955 PCCAP05165 728 aaPredicted RBP17.23■□□□□ 0.35
DDX41-208ENST00000507955 HSPD1P10809 573 aaKnown RBP17.23■□□□□ 0.35
DDX41-208ENST00000507955 TSGA10IPQ3SY00 556 aa17.23■□□□□ 0.35
DDX41-208ENST00000507955 ITGA6P23229 1130 aa17.22■□□□□ 0.35
DDX41-208ENST00000507955 TTC39AQ5SRH9 613 aa17.22■□□□□ 0.35
DDX41-208ENST00000507955 TFIP11Q9UBB9 837 aaKnown RBP17.22■□□□□ 0.35
DDX41-208ENST00000507955 U3KPZ7 1027 aaPredicted RBP17.22■□□□□ 0.35
DDX41-208ENST00000507955 SNAP23O00161 211 aa17.22■□□□□ 0.35
DDX41-208ENST00000507955 ZAP70P43403 619 aa17.22■□□□□ 0.35
DDX41-208ENST00000507955 HAND2P61296 217 aa17.22■□□□□ 0.35
DDX41-208ENST00000507955 FGD1P98174 961 aa17.22■□□□□ 0.35
DDX41-208ENST00000507955 ZMYM1Q5SVZ6 1142 aa17.22■□□□□ 0.35
DDX41-208ENST00000507955 TTLL11Q8NHH1 800 aa17.22■□□□□ 0.35
DDX41-208ENST00000507955 GPR108Q9NPR9 543 aa17.22■□□□□ 0.35
DDX41-208ENST00000507955 TRMT112Q9UI30 125 aaKnown RBP17.22■□□□□ 0.35
DDX41-208ENST00000507955 NHSL1Q5SYE7 1610 aa17.22■□□□□ 0.35
DDX41-208ENST00000507955 ITGB4P16144 1822 aa17.21■□□□□ 0.35
DDX41-208ENST00000507955 CIAO1O76071 339 aa17.21■□□□□ 0.35
DDX41-208ENST00000507955 MSNP26038 577 aaKnown RBP17.21■□□□□ 0.35
DDX41-208ENST00000507955 LDHAL6AQ6ZMR3 332 aa17.21■□□□□ 0.35
DDX41-208ENST00000507955 HELBQ8NG08 1087 aaPredicted RBP17.21■□□□□ 0.35
DDX41-208ENST00000507955 NAP1L2Q9ULW6 460 aaPredicted RBP17.21■□□□□ 0.35
DDX41-208ENST00000507955 BCL9O00512 1426 aa17.21■□□□□ 0.35
DDX41-208ENST00000507955 SH3TC1Q8TE82 1336 aa17.21■□□□□ 0.35
DDX41-208ENST00000507955 RNF113AO15541 343 aaKnown RBP17.21■□□□□ 0.35
DDX41-208ENST00000507955 WASHC4Q2M389 1173 aa17.21■□□□□ 0.35
DDX41-208ENST00000507955 VSIG10Q8N0Z9 540 aa17.21■□□□□ 0.35
DDX41-208ENST00000507955 TEX13AQ9BXU3 409 aaPredicted RBP17.21■□□□□ 0.35
DDX41-208ENST00000507955 NOL7Q9UMY1 257 aaKnown RBP17.21■□□□□ 0.35
DDX41-208ENST00000507955 OFD1O75665 1012 aa17.2■□□□□ 0.34
DDX41-208ENST00000507955 CSF1RP07333 972 aa17.2■□□□□ 0.34
DDX41-208ENST00000507955 APOBRQ0VD83 1088 aa17.2■□□□□ 0.34
DDX41-208ENST00000507955 GPHNQ9NQX3 736 aaPredicted RBP17.2■□□□□ 0.34
DDX41-208ENST00000507955 PALLDQ8WX93 1383 aa17.2■□□□□ 0.34
DDX41-208ENST00000507955 IRS4O14654 1257 aaPredicted RBP17.2■□□□□ 0.34
DDX41-208ENST00000507955 CCT2P78371 535 aaKnown RBP17.2■□□□□ 0.34
DDX41-208ENST00000507955 TRIM28Q13263 835 aaKnown RBP17.2■□□□□ 0.34
DDX41-208ENST00000507955 ANKRD1Q15327 319 aa17.2■□□□□ 0.34
DDX41-208ENST00000507955 METTL24Q5JXM2 366 aa17.2■□□□□ 0.34
DDX41-208ENST00000507955 CCDC158Q5M9N0 1113 aa17.2■□□□□ 0.34
DDX41-208ENST00000507955 MPNDQ8N594 471 aa17.2■□□□□ 0.34
DDX41-208ENST00000507955 NUTM2BA6NNL0 878 aaPredicted RBP17.19■□□□□ 0.34
DDX41-208ENST00000507955 NUTM2EB1AL46 878 aaPredicted RBP17.19■□□□□ 0.34
DDX41-208ENST00000507955 SCRN1Q12765 414 aa17.19■□□□□ 0.34
DDX41-208ENST00000507955 HS1BP3Q53T59 392 aa17.19■□□□□ 0.34
DDX41-208ENST00000507955 NUTM2AQ8IVF1 878 aaPredicted RBP17.19■□□□□ 0.34
DDX41-208ENST00000507955 TMEM87AQ8NBN3 555 aa17.19■□□□□ 0.34
DDX41-208ENST00000507955 NCOA5Q9HCD5 579 aaKnown RBP17.19■□□□□ 0.34
DDX41-208ENST00000507955 UBN2Q6ZU65 1347 aa17.19■□□□□ 0.34
DDX41-208ENST00000507955 GIMAP6Q6P9H5 292 aa17.19■□□□□ 0.34
DDX41-208ENST00000507955 TTC6Q86TZ1 520 aa17.19■□□□□ 0.34
DDX41-208ENST00000507955 DZIP3Q86Y13 1208 aaKnown RBP17.19■□□□□ 0.34
DDX41-208ENST00000507955 PUS7LQ9H0K6 701 aaKnown RBP17.19■□□□□ 0.34
DDX41-208ENST00000507955 TSPY26PQ9H489 355 aa17.19■□□□□ 0.34
DDX41-208ENST00000507955 HELLSQ9NRZ9 838 aa17.19■□□□□ 0.34
DDX41-208ENST00000507955 E7EWF7 191 aa17.18■□□□□ 0.34
DDX41-208ENST00000507955 FOXP2O15409 715 aa17.18■□□□□ 0.34
DDX41-208ENST00000507955 UBE2HP62256 183 aa17.18■□□□□ 0.34
DDX41-208ENST00000507955 KRT32Q14532 448 aa17.18■□□□□ 0.34
DDX41-208ENST00000507955 GTF3C6Q969F1 213 aa17.18■□□□□ 0.34
DDX41-208ENST00000507955 CNNM1Q9NRU3 951 aa17.18■□□□□ 0.34
DDX41-208ENST00000507955 RIPOR2Q9Y4F9 1068 aa17.18■□□□□ 0.34
DDX41-208ENST00000507955 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms