RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 MED23Q9ULK4 1368 aa20.06■□□□□ 0.8
DDX41-207ENST00000507900 PDE8BO95263 885 aa20.05■□□□□ 0.8
DDX41-207ENST00000507900 ATP2B3Q16720 1220 aa20.05■□□□□ 0.8
DDX41-207ENST00000507900 ERFEQ4G0M1 354 aa20.05■□□□□ 0.8
DDX41-207ENST00000507900 TRAPPC3LQ5T215 181 aa20.05■□□□□ 0.8
DDX41-207ENST00000507900 KIAA1211Q6ZU35 1233 aa20.05■□□□□ 0.8
DDX41-207ENST00000507900 SMIM5Q71RC9 77 aa20.05■□□□□ 0.8
DDX41-207ENST00000507900 XAGE2Q96GT9 111 aa20.05■□□□□ 0.8
DDX41-207ENST00000507900 SETDB2Q96T68 719 aa20.05■□□□□ 0.8
DDX41-207ENST00000507900 NMIQ13287 307 aaPredicted RBP20.04■□□□□ 0.8
DDX41-207ENST00000507900 CCDC158Q5M9N0 1113 aa20.04■□□□□ 0.8
DDX41-207ENST00000507900 KBTBD3Q8NAB2 608 aa20.04■□□□□ 0.8
DDX41-207ENST00000507900 ZNF512BQ96KM6 892 aaPredicted RBP20.04■□□□□ 0.8
DDX41-207ENST00000507900 ANP32EQ9BTT0 268 aa20.04■□□□□ 0.8
DDX41-207ENST00000507900 AKAP11Q9UKA4 1901 aa20.04■□□□□ 0.8
DDX41-207ENST00000507900 RGPD3A6NKT7 1758 aaPredicted RBP20.04■□□□□ 0.8
DDX41-207ENST00000507900 RGPD4Q7Z3J3 1758 aa20.04■□□□□ 0.8
DDX41-207ENST00000507900 CD2BP2O95400 341 aaKnown RBP20.04■□□□□ 0.8
DDX41-207ENST00000507900 ADORA1P30542 326 aa20.04■□□□□ 0.8
DDX41-207ENST00000507900 RFC4P35249 363 aa20.04■□□□□ 0.8
DDX41-207ENST00000507900 EDC3Q96F86 508 aaKnown RBP20.04■□□□□ 0.8
DDX41-207ENST00000507900 DNAJC2Q99543 621 aaKnown RBP20.04■□□□□ 0.8
DDX41-207ENST00000507900 ANTXR1Q9H6X2 564 aa20.04■□□□□ 0.8
DDX41-207ENST00000507900 K7ELQ4 463 aaPredicted RBP20.03■□□□□ 0.8
DDX41-207ENST00000507900 IFIT1P09914 478 aaKnown RBP20.03■□□□□ 0.8
DDX41-207ENST00000507900 FAM227BQ96M60 508 aa20.03■□□□□ 0.8
DDX41-207ENST00000507900 SEC31BQ9NQW1 1179 aa20.03■□□□□ 0.8
DDX41-207ENST00000507900 PAG1Q9NWQ8 432 aa20.03■□□□□ 0.8
DDX41-207ENST00000507900 COL4A1P02462 1669 aa20.03■□□□□ 0.8
DDX41-207ENST00000507900 MYH7P12883 1935 aa20.02■□□□□ 0.8
DDX41-207ENST00000507900 TNS1Q9HBL0 1735 aaKnown RBP20.02■□□□□ 0.8
DDX41-207ENST00000507900 CCDC171Q6TFL3 1326 aa20.02■□□□□ 0.8
DDX41-207ENST00000507900 A0A0D9SFI3 127 aa20.02■□□□□ 0.8
DDX41-207ENST00000507900 FGFR2P21802 821 aa20.02■□□□□ 0.8
DDX41-207ENST00000507900 PUM3Q15397 648 aaKnown RBP20.02■□□□□ 0.8
DDX41-207ENST00000507900 CDC5LQ99459 802 aaKnown RBP20.02■□□□□ 0.8
DDX41-207ENST00000507900 MPHOSPH8Q99549 860 aa20.02■□□□□ 0.8
DDX41-207ENST00000507900 PALD1Q9ULE6 856 aa20.02■□□□□ 0.8
DDX41-207ENST00000507900 EP400Q96L91 3159 aa20.02■□□□□ 0.8
DDX41-207ENST00000507900 CARMIL3Q8ND23 1372 aa20.01■□□□□ 0.79
DDX41-207ENST00000507900 ST18O60284 1047 aa20.01■□□□□ 0.79
DDX41-207ENST00000507900 SSFA2P28290 1259 aa20.01■□□□□ 0.79
DDX41-207ENST00000507900 IGHMBP2P38935 993 aaKnown RBP20.01■□□□□ 0.79
DDX41-207ENST00000507900 TTC39AQ5SRH9 613 aa20.01■□□□□ 0.79
DDX41-207ENST00000507900 BICDL1Q6ZP65 573 aa20.01■□□□□ 0.79
DDX41-207ENST00000507900 RXRBP28702 533 aa20■□□□□ 0.79
DDX41-207ENST00000507900 GORABQ5T7V8 394 aa20■□□□□ 0.79
DDX41-207ENST00000507900 NBPF5PQ86XG9 351 aaPredicted RBP20■□□□□ 0.79
DDX41-207ENST00000507900 LPIN2Q92539 896 aa20■□□□□ 0.79
DDX41-207ENST00000507900 KCNB2Q92953 911 aa20■□□□□ 0.79
DDX41-207ENST00000507900 TNRC6CQ9HCJ0 1690 aaKnown RBP20■□□□□ 0.79
DDX41-207ENST00000507900 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20■□□□□ 0.79
DDX41-207ENST00000507900 GOLIM4O00461 696 aa20■□□□□ 0.79
DDX41-207ENST00000507900 PLSCR1O15162 318 aa20■□□□□ 0.79
DDX41-207ENST00000507900 TXNRD1Q16881 649 aa20■□□□□ 0.79
DDX41-207ENST00000507900 TPTE2Q6XPS3 522 aa20■□□□□ 0.79
DDX41-207ENST00000507900 C3orf67Q6ZVT6 689 aa20■□□□□ 0.79
DDX41-207ENST00000507900 DDX46Q7L014 1031 aaKnown RBP20■□□□□ 0.79
DDX41-207ENST00000507900 NDUFB9Q9Y6M9 179 aa20■□□□□ 0.79
DDX41-207ENST00000507900 PHF14O94880 888 aa19.99■□□□□ 0.79
DDX41-207ENST00000507900 PTH1RQ03431 593 aa19.99■□□□□ 0.79
DDX41-207ENST00000507900 MAP4K1Q92918 833 aa19.99■□□□□ 0.79
DDX41-207ENST00000507900 TAF1P21675 1872 aa19.98■□□□□ 0.79
DDX41-207ENST00000507900 GTF2E1P29083 439 aaPredicted RBP19.98■□□□□ 0.79
DDX41-207ENST00000507900 PROM2Q8N271 834 aa19.98■□□□□ 0.79
DDX41-207ENST00000507900 ARID4AP29374 1257 aaPredicted RBP19.97■□□□□ 0.79
DDX41-207ENST00000507900 SNX14Q9Y5W7 946 aa19.97■□□□□ 0.79
DDX41-207ENST00000507900 SLC5A1P13866 664 aa19.96■□□□□ 0.79
DDX41-207ENST00000507900 DDIT3P35638 169 aa19.96■□□□□ 0.79
DDX41-207ENST00000507900 MCM2P49736 904 aa19.96■□□□□ 0.79
DDX41-207ENST00000507900 NFIXQ14938 502 aa19.96■□□□□ 0.79
DDX41-207ENST00000507900 NECTIN1Q15223 517 aa19.96■□□□□ 0.79
DDX41-207ENST00000507900 ANKRD18AQ8IVF6 992 aa19.96■□□□□ 0.79
DDX41-207ENST00000507900 NLRP3Q96P20 1036 aa19.96■□□□□ 0.79
DDX41-207ENST00000507900 SLKQ9H2G2 1235 aaPredicted RBP19.96■□□□□ 0.79
DDX41-207ENST00000507900 HELLSQ9NRZ9 838 aa19.96■□□□□ 0.79
DDX41-207ENST00000507900 DOCK2Q92608 1830 aa19.96■□□□□ 0.79
DDX41-207ENST00000507900 UQCRFS1P1P0C7P4 283 aa19.95■□□□□ 0.78
DDX41-207ENST00000507900 SCARF1Q14162 830 aa19.95■□□□□ 0.78
DDX41-207ENST00000507900 LRRFIP1Q32MZ4 808 aaKnown RBP19.95■□□□□ 0.78
DDX41-207ENST00000507900 MCMDC2Q4G0Z9 681 aa19.95■□□□□ 0.78
DDX41-207ENST00000507900 ZNF589Q86UQ0 364 aaPredicted RBP19.95■□□□□ 0.78
DDX41-207ENST00000507900 BSDC1Q9NW68 430 aaPredicted RBP19.95■□□□□ 0.78
DDX41-207ENST00000507900 TAF5LO75529 589 aa19.95■□□□□ 0.78
DDX41-207ENST00000507900 GYS1P13807 737 aa19.95■□□□□ 0.78
DDX41-207ENST00000507900 CHRNDQ07001 517 aa19.95■□□□□ 0.78
DDX41-207ENST00000507900 ZMYM1Q5SVZ6 1142 aa19.95■□□□□ 0.78
DDX41-207ENST00000507900 RBM8AQ9Y5S9 174 aaKnown RBP19.95■□□□□ 0.78
DDX41-207ENST00000507900 ZFYP08048 801 aaPredicted RBP19.94■□□□□ 0.78
DDX41-207ENST00000507900 MCAMP43121 646 aa19.94■□□□□ 0.78
DDX41-207ENST00000507900 NEK4P51957 841 aa19.94■□□□□ 0.78
DDX41-207ENST00000507900 CCDC102BQ68D86 513 aa19.94■□□□□ 0.78
DDX41-207ENST00000507900 RASEFQ8IZ41 740 aa19.94■□□□□ 0.78
DDX41-207ENST00000507900 HELBQ8NG08 1087 aaPredicted RBP19.94■□□□□ 0.78
DDX41-207ENST00000507900 RNF113AO15541 343 aaKnown RBP19.93■□□□□ 0.78
DDX41-207ENST00000507900 ZAP70P43403 619 aa19.93■□□□□ 0.78
DDX41-207ENST00000507900 FKBP4Q02790 459 aaKnown RBP eCLIP19.93■□□□□ 0.78
DDX41-207ENST00000507900 RGS17Q9UGC6 210 aaPredicted RBP19.93■□□□□ 0.78
DDX41-207ENST00000507900 PHKA1P46020 1223 aa19.92■□□□□ 0.78
DDX41-207ENST00000507900 TM6SF1Q9BZW5 370 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms