RNA–Protein interactions for RNA: ENST00000507367.1

SMAD1-206, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-206ENST00000507367 RIPOR2Q9Y4F9 1068 aa9.42□□□□□ -0.9
SMAD1-206ENST00000507367 FPGT-TNNI3KV9GXZ4 949 aa9.42□□□□□ -0.9
SMAD1-206ENST00000507367 KLRG2A4D1S0 409 aaPredicted RBP9.41□□□□□ -0.9
SMAD1-206ENST00000507367 H0YIN7 160 aa9.41□□□□□ -0.9
SMAD1-206ENST00000507367 GLRX3O76003 335 aaKnown RBP9.41□□□□□ -0.9
SMAD1-206ENST00000507367 PDE8BO95263 885 aa9.41□□□□□ -0.9
SMAD1-206ENST00000507367 IFIT1P09914 478 aaKnown RBP9.41□□□□□ -0.9
SMAD1-206ENST00000507367 SLC5A1P13866 664 aa9.41□□□□□ -0.9
SMAD1-206ENST00000507367 HOXA10P31260 410 aaPredicted RBP9.41□□□□□ -0.9
SMAD1-206ENST00000507367 KCNJ4P48050 445 aa9.41□□□□□ -0.9
SMAD1-206ENST00000507367 R3HDM1Q15032 1099 aaKnown RBP9.41□□□□□ -0.9
SMAD1-206ENST00000507367 ATP2B3Q16720 1220 aa9.41□□□□□ -0.9
SMAD1-206ENST00000507367 CCDC158Q5M9N0 1113 aa9.41□□□□□ -0.9
SMAD1-206ENST00000507367 C3orf67Q6ZVT6 689 aa9.41□□□□□ -0.9
SMAD1-206ENST00000507367 C16orf71Q8IYS4 520 aaPredicted RBP9.41□□□□□ -0.9
SMAD1-206ENST00000507367 CRAMP1Q96RY5 1269 aa9.41□□□□□ -0.9
SMAD1-206ENST00000507367 PUS3Q9BZE2 481 aaKnown RBP9.41□□□□□ -0.9
SMAD1-206ENST00000507367 NRXN2Q9P2S2 1712 aa9.4□□□□□ -0.9
SMAD1-206ENST00000507367 A0A1B0GUL7 405 aa9.4□□□□□ -0.9
SMAD1-206ENST00000507367 TTC22Q5TAA0 569 aa9.4□□□□□ -0.9
SMAD1-206ENST00000507367 SKAP1Q86WV1 359 aa9.4□□□□□ -0.9
SMAD1-206ENST00000507367 C2CD5Q86YS7 1000 aa9.4□□□□□ -0.9
SMAD1-206ENST00000507367 LPIN2Q92539 896 aa9.4□□□□□ -0.9
SMAD1-206ENST00000507367 EAF2Q96CJ1 260 aaPredicted RBP9.4□□□□□ -0.9
SMAD1-206ENST00000507367 MASTLQ96GX5 879 aa9.4□□□□□ -0.9
SMAD1-206ENST00000507367 LRP5O75197 1615 aa9.4□□□□□ -0.9
SMAD1-206ENST00000507367 ZNF609O15014 1411 aa9.39□□□□□ -0.91
SMAD1-206ENST00000507367 TNRC6CQ9HCJ0 1690 aaKnown RBP9.39□□□□□ -0.91
SMAD1-206ENST00000507367 TRIM6-TRIM34B2RNG4 842 aa9.39□□□□□ -0.91
SMAD1-206ENST00000507367 ZBTB7AO95365 584 aa9.39□□□□□ -0.91
SMAD1-206ENST00000507367 SRGNP10124 158 aa9.39□□□□□ -0.91
SMAD1-206ENST00000507367 CHRNDQ07001 517 aa9.39□□□□□ -0.91
SMAD1-206ENST00000507367 TTC39AQ5SRH9 613 aa9.39□□□□□ -0.91
SMAD1-206ENST00000507367 STYK1Q6J9G0 422 aa9.39□□□□□ -0.91
SMAD1-206ENST00000507367 CNTROBQ8N137 903 aa9.39□□□□□ -0.91
SMAD1-206ENST00000507367 OTUD7AQ8TE49 926 aaPredicted RBP9.39□□□□□ -0.91
SMAD1-206ENST00000507367 CELF1Q92879 486 aaKnown RBP9.39□□□□□ -0.91
SMAD1-206ENST00000507367 CNKSR1Q969H4 720 aa9.39□□□□□ -0.91
SMAD1-206ENST00000507367 CCDC8Q9H0W5 538 aaPredicted RBP9.39□□□□□ -0.91
SMAD1-206ENST00000507367 ANKIB1Q9P2G1 1089 aa9.39□□□□□ -0.91
SMAD1-206ENST00000507367 SALL3Q9BXA9 1300 aa9.38□□□□□ -0.91
SMAD1-206ENST00000507367 PPEF1O14829 653 aaPredicted RBP9.38□□□□□ -0.91
SMAD1-206ENST00000507367 ATP5JP18859 108 aa9.38□□□□□ -0.91
SMAD1-206ENST00000507367 TIMM10P62072 90 aa9.38□□□□□ -0.91
SMAD1-206ENST00000507367 UBE4AQ14139 1066 aa9.38□□□□□ -0.91
SMAD1-206ENST00000507367 CAVIN4Q5BKX8 364 aa9.38□□□□□ -0.91
SMAD1-206ENST00000507367 ZNF622Q969S3 477 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMAD1-206ENST00000507367 UPF2Q9HAU5 1272 aaKnown RBP9.38□□□□□ -0.91
SMAD1-206ENST00000507367 GNL3LQ9NVN8 582 aaKnown RBP9.38□□□□□ -0.91
SMAD1-206ENST00000507367 DBNLQ9UJU6 430 aaKnown RBP9.38□□□□□ -0.91
SMAD1-206ENST00000507367 MINPP1Q9UNW1 487 aa9.38□□□□□ -0.91
SMAD1-206ENST00000507367 CASZ1Q86V15 1759 aa9.37□□□□□ -0.91
SMAD1-206ENST00000507367 XDHP47989 1333 aa9.37□□□□□ -0.91
SMAD1-206ENST00000507367 HIP1O00291 1037 aa9.37□□□□□ -0.91
SMAD1-206ENST00000507367 CDC45O75419 566 aa9.37□□□□□ -0.91
SMAD1-206ENST00000507367 UQCRFS1P1P0C7P4 283 aa9.37□□□□□ -0.91
SMAD1-206ENST00000507367 LRRFIP1Q32MZ4 808 aaKnown RBP9.37□□□□□ -0.91
SMAD1-206ENST00000507367 VPS37DQ86XT2 251 aa9.37□□□□□ -0.91
SMAD1-206ENST00000507367 VGLL2Q8N8G2 317 aa9.37□□□□□ -0.91
SMAD1-206ENST00000507367 HELBQ8NG08 1087 aaPredicted RBP9.37□□□□□ -0.91
SMAD1-206ENST00000507367 RILPL2Q969X0 211 aa9.37□□□□□ -0.91
SMAD1-206ENST00000507367 XAGE2Q96GT9 111 aa9.37□□□□□ -0.91
SMAD1-206ENST00000507367 DBNDD2Q9BQY9 259 aa9.37□□□□□ -0.91
SMAD1-206ENST00000507367 PDGFDQ9GZP0 370 aaPredicted RBP9.37□□□□□ -0.91
SMAD1-206ENST00000507367 ATF5Q9Y2D1 282 aaPredicted RBP9.37□□□□□ -0.91
SMAD1-206ENST00000507367 LEMD3Q9Y2U8 911 aa9.37□□□□□ -0.91
SMAD1-206ENST00000507367 C10orf71Q711Q0 1435 aa9.37□□□□□ -0.91
SMAD1-206ENST00000507367 SPEF2Q9C093 1822 aa9.36□□□□□ -0.91
SMAD1-206ENST00000507367 PSDA5PKW4 1024 aaPredicted RBP9.36□□□□□ -0.91
SMAD1-206ENST00000507367 TAF5LO75529 589 aa9.36□□□□□ -0.91
SMAD1-206ENST00000507367 SDSP20132 328 aa9.36□□□□□ -0.91
SMAD1-206ENST00000507367 ATP2B4P23634 1241 aa9.36□□□□□ -0.91
SMAD1-206ENST00000507367 TGFB2P61812 414 aa9.36□□□□□ -0.91
SMAD1-206ENST00000507367 GRIPAP1Q4V328 841 aa9.36□□□□□ -0.91
SMAD1-206ENST00000507367 TSHZ3Q63HK5 1081 aa9.36□□□□□ -0.91
SMAD1-206ENST00000507367 CC2D2BQ6DHV5 1058 aa9.36□□□□□ -0.91
SMAD1-206ENST00000507367 TICAM2Q86XR7 235 aa9.36□□□□□ -0.91
SMAD1-206ENST00000507367 SP8Q8IXZ3 490 aa9.36□□□□□ -0.91
SMAD1-206ENST00000507367 PI4K2BQ8TCG2 481 aa9.36□□□□□ -0.91
SMAD1-206ENST00000507367 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.36□□□□□ -0.91
SMAD1-206ENST00000507367 EVI5LQ96CN4 794 aa9.36□□□□□ -0.91
SMAD1-206ENST00000507367 ZNF512BQ96KM6 892 aaPredicted RBP9.36□□□□□ -0.91
SMAD1-206ENST00000507367 TLR7Q9NYK1 1049 aaKnown RBP9.36□□□□□ -0.91
SMAD1-206ENST00000507367 ATP6V0A2Q9Y487 856 aa9.36□□□□□ -0.91
SMAD1-206ENST00000507367 ZNF804BA4D1E1 1349 aa9.35□□□□□ -0.91
SMAD1-206ENST00000507367 GSPT1P15170 499 aaKnown RBP9.35□□□□□ -0.91
SMAD1-206ENST00000507367 FGFR2P21802 821 aa9.35□□□□□ -0.91
SMAD1-206ENST00000507367 SOGA3Q5TF21 947 aa9.35□□□□□ -0.91
SMAD1-206ENST00000507367 ILDR2Q71H61 639 aa9.35□□□□□ -0.91
SMAD1-206ENST00000507367 HAUS7Q99871 368 aa9.35□□□□□ -0.91
SMAD1-206ENST00000507367 BOLA2Q9H3K6 86 aa9.35□□□□□ -0.91
SMAD1-206ENST00000507367 SPON1Q9HCB6 807 aa9.35□□□□□ -0.91
SMAD1-206ENST00000507367 GGA1Q9UJY5 639 aa9.35□□□□□ -0.91
SMAD1-206ENST00000507367 NSFL1CQ9UNZ2 370 aaKnown RBP9.35□□□□□ -0.91
SMAD1-206ENST00000507367 ANKRD31Q8N7Z5 1873 aa9.34□□□□□ -0.91
SMAD1-206ENST00000507367 SEMA3EO15041 775 aa9.34□□□□□ -0.91
SMAD1-206ENST00000507367 FRAT2O75474 233 aaPredicted RBP9.34□□□□□ -0.91
SMAD1-206ENST00000507367 UFL1O94874 794 aa9.34□□□□□ -0.91
SMAD1-206ENST00000507367 ADORA1P30542 326 aa9.34□□□□□ -0.91
SMAD1-206ENST00000507367 TTF1Q15361 905 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms