RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 GRIN2CQ14957 1233 aa11.94□□□□□ -0.5
PFDN1-202ENST00000507185 HIF1AQ16665 826 aa11.94□□□□□ -0.5
PFDN1-202ENST00000507185 PLA2G4EQ3MJ16 856 aa11.94□□□□□ -0.5
PFDN1-202ENST00000507185 ABCC1P33527 1531 aa11.94□□□□□ -0.5
PFDN1-202ENST00000507185 AGLP35573 1532 aa11.94□□□□□ -0.5
PFDN1-202ENST00000507185 IQSEC2Q5JU85 1478 aa11.94□□□□□ -0.5
PFDN1-202ENST00000507185 REREQ9P2R6 1566 aa11.93□□□□□ -0.5
PFDN1-202ENST00000507185 ALAS2P22557 587 aa11.93□□□□□ -0.5
PFDN1-202ENST00000507185 IGFBP4P22692 258 aa11.93□□□□□ -0.5
PFDN1-202ENST00000507185 HSPA1LP34931 641 aa11.93□□□□□ -0.5
PFDN1-202ENST00000507185 DGKGP49619 791 aa11.93□□□□□ -0.5
PFDN1-202ENST00000507185 NEUROD1Q13562 356 aa11.93□□□□□ -0.5
PFDN1-202ENST00000507185 NPATQ14207 1427 aa11.93□□□□□ -0.5
PFDN1-202ENST00000507185 RFX1P22670 979 aa11.92□□□□□ -0.5
PFDN1-202ENST00000507185 TYRO3Q06418 890 aa11.92□□□□□ -0.5
PFDN1-202ENST00000507185 SPEM2Q0P670 501 aa11.92□□□□□ -0.5
PFDN1-202ENST00000507185 ALYREFQ86V81 257 aaKnown RBP11.92□□□□□ -0.5
PFDN1-202ENST00000507185 SLC30A3Q99726 388 aa11.92□□□□□ -0.5
PFDN1-202ENST00000507185 KCNH4Q9UQ05 1017 aa11.92□□□□□ -0.5
PFDN1-202ENST00000507185 ELOA3CA0A087WX78 387 aaPredicted RBP11.91□□□□□ -0.5
PFDN1-202ENST00000507185 ELOA3DA6NLF2 546 aaPredicted RBP11.91□□□□□ -0.5
PFDN1-202ENST00000507185 SIN3BO75182 1162 aa11.91□□□□□ -0.5
PFDN1-202ENST00000507185 ELOA3BQ3SY89 546 aa11.91□□□□□ -0.5
PFDN1-202ENST00000507185 CDCA8Q53HL2 280 aa11.91□□□□□ -0.5
PFDN1-202ENST00000507185 ELOA3Q8NG57 546 aa11.91□□□□□ -0.5
PFDN1-202ENST00000507185 FAM200AQ8TCP9 573 aa11.91□□□□□ -0.5
PFDN1-202ENST00000507185 CFDP1Q9UEE9 299 aaPredicted RBP11.91□□□□□ -0.5
PFDN1-202ENST00000507185 TOM1O60784 492 aa11.9□□□□□ -0.5
PFDN1-202ENST00000507185 COL8A1P27658 744 aa11.9□□□□□ -0.5
PFDN1-202ENST00000507185 RTN1Q16799 776 aa11.9□□□□□ -0.5
PFDN1-202ENST00000507185 BTLAQ7Z6A9 289 aa11.9□□□□□ -0.5
PFDN1-202ENST00000507185 SUV39H2Q9H5I1 410 aa11.9□□□□□ -0.5
PFDN1-202ENST00000507185 CCDC18Q5T9S5 1454 aa11.89□□□□□ -0.51
PFDN1-202ENST00000507185 MSTNO14793 375 aa11.89□□□□□ -0.51
PFDN1-202ENST00000507185 KCNQ4P56696 695 aa11.89□□□□□ -0.51
PFDN1-202ENST00000507185 NOP53Q9NZM5 478 aaKnown RBP11.89□□□□□ -0.51
PFDN1-202ENST00000507185 SYCP2Q9BX26 1530 aa11.89□□□□□ -0.51
PFDN1-202ENST00000507185 RAB44Q7Z6P3 723 aaPredicted RBP11.88□□□□□ -0.51
PFDN1-202ENST00000507185 PREX2Q70Z35 1606 aa11.88□□□□□ -0.51
PFDN1-202ENST00000507185 SAMD9LQ8IVG5 1584 aa11.88□□□□□ -0.51
PFDN1-202ENST00000507185 CASKIN1Q8WXD9 1431 aa11.87□□□□□ -0.51
PFDN1-202ENST00000507185 KRBA1A5PL33 1030 aa11.87□□□□□ -0.51
PFDN1-202ENST00000507185 CCNB3Q8WWL7 1395 aa11.87□□□□□ -0.51
PFDN1-202ENST00000507185 A2MP01023 1474 aa11.87□□□□□ -0.51
PFDN1-202ENST00000507185 ITSN2Q9NZM3 1697 aa11.87□□□□□ -0.51
PFDN1-202ENST00000507185 PTPRKQ15262 1439 aa11.86□□□□□ -0.51
PFDN1-202ENST00000507185 ADARB2-AS1A8MUL3 147 aa11.86□□□□□ -0.51
PFDN1-202ENST00000507185 VTI1AQ96AJ9 217 aa11.86□□□□□ -0.51
PFDN1-202ENST00000507185 SPOCK3Q9BQ16 436 aa11.86□□□□□ -0.51
PFDN1-202ENST00000507185 SETD1BQ9UPS6 1966 aaKnown RBP11.86□□□□□ -0.51
PFDN1-202ENST00000507185 CDC42BPBQ9Y5S2 1711 aa11.86□□□□□ -0.51
PFDN1-202ENST00000507185 CEP170BQ9Y4F5 1589 aaPredicted RBP11.85□□□□□ -0.51
PFDN1-202ENST00000507185 PLA2R1Q13018 1463 aa11.85□□□□□ -0.51
PFDN1-202ENST00000507185 ITGB2P05107 769 aa11.85□□□□□ -0.51
PFDN1-202ENST00000507185 WEE1P30291 646 aa11.85□□□□□ -0.51
PFDN1-202ENST00000507185 IER5Q5VY09 327 aa11.85□□□□□ -0.51
PFDN1-202ENST00000507185 TNFRSF25Q93038 417 aa11.85□□□□□ -0.51
PFDN1-202ENST00000507185 NOVA2Q9UNW9 492 aaKnown RBP11.85□□□□□ -0.51
PFDN1-202ENST00000507185 KIDINS220Q9ULH0 1771 aa11.84□□□□□ -0.51
PFDN1-202ENST00000507185 TGFBR3LH3BV60 316 aa11.84□□□□□ -0.51
PFDN1-202ENST00000507185 FOXO3O43524 673 aa11.84□□□□□ -0.51
PFDN1-202ENST00000507185 BHMTQ93088 406 aa11.84□□□□□ -0.51
PFDN1-202ENST00000507185 MDFIQ99750 246 aa11.84□□□□□ -0.51
PFDN1-202ENST00000507185 ATP7AQ04656 1500 aa11.84□□□□□ -0.51
PFDN1-202ENST00000507185 TCOF1Q13428 1488 aaKnown RBP11.83□□□□□ -0.52
PFDN1-202ENST00000507185 SUPT6HQ7KZ85 1726 aaKnown RBP11.83□□□□□ -0.52
PFDN1-202ENST00000507185 MTUS2Q5JR59 1369 aa11.83□□□□□ -0.52
PFDN1-202ENST00000507185 MYO3AQ8NEV4 1616 aa11.83□□□□□ -0.52
PFDN1-202ENST00000507185 GPATCH8Q9UKJ3 1502 aaKnown RBP11.83□□□□□ -0.52
PFDN1-202ENST00000507185 CLTCQ00610 1675 aaKnown RBP11.83□□□□□ -0.52
PFDN1-202ENST00000507185 ZNF644Q9H582 1327 aaPredicted RBP11.83□□□□□ -0.52
PFDN1-202ENST00000507185 TNRQ92752 1358 aa11.82□□□□□ -0.52
PFDN1-202ENST00000507185 KIF3BO15066 747 aa11.82□□□□□ -0.52
PFDN1-202ENST00000507185 ADH7P40394 386 aa11.82□□□□□ -0.52
PFDN1-202ENST00000507185 SUZ12Q15022 739 aaKnown RBP11.82□□□□□ -0.52
PFDN1-202ENST00000507185 ANKLE2Q86XL3 938 aa11.82□□□□□ -0.52
PFDN1-202ENST00000507185 MED1Q15648 1581 aaPredicted RBP11.82□□□□□ -0.52
PFDN1-202ENST00000507185 PLEKHH2Q8IVE3 1493 aa11.82□□□□□ -0.52
PFDN1-202ENST00000507185 PLVAPQ9BX97 442 aa11.81□□□□□ -0.52
PFDN1-202ENST00000507185 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.81□□□□□ -0.52
PFDN1-202ENST00000507185 KLK14Q9P0G3 267 aa11.81□□□□□ -0.52
PFDN1-202ENST00000507185 BCS1LQ9Y276 419 aa11.81□□□□□ -0.52
PFDN1-202ENST00000507185 A2ML1A8K2U0 1454 aa11.81□□□□□ -0.52
PFDN1-202ENST00000507185 WASHC2CQ9Y4E1 1318 aa11.81□□□□□ -0.52
PFDN1-202ENST00000507185 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.8□□□□□ -0.52
PFDN1-202ENST00000507185 TRIM11Q96F44 468 aa11.8□□□□□ -0.52
PFDN1-202ENST00000507185 FYCO1Q9BQS8 1478 aa11.8□□□□□ -0.52
PFDN1-202ENST00000507185 MROH2AA6NES4 1674 aa11.8□□□□□ -0.52
PFDN1-202ENST00000507185 LRRIQ1Q96JM4 1722 aa11.8□□□□□ -0.52
PFDN1-202ENST00000507185 KIAA1107Q9UPP5 1409 aa11.79□□□□□ -0.52
PFDN1-202ENST00000507185 SHANK2Q9UPX8 1470 aa11.79□□□□□ -0.52
PFDN1-202ENST00000507185 M0R082 166 aa11.79□□□□□ -0.52
PFDN1-202ENST00000507185 PROCP04070 461 aa11.79□□□□□ -0.52
PFDN1-202ENST00000507185 EPB42P16452 691 aa11.79□□□□□ -0.52
PFDN1-202ENST00000507185 DGKZQ13574 1117 aa11.79□□□□□ -0.52
PFDN1-202ENST00000507185 ZNF417Q8TAU3 575 aa11.79□□□□□ -0.52
PFDN1-202ENST00000507185 PNMA5Q96PV4 448 aa11.79□□□□□ -0.52
PFDN1-202ENST00000507185 ZNF587Q96SQ5 575 aaPredicted RBP11.79□□□□□ -0.52
PFDN1-202ENST00000507185 IGFLR1Q9H665 355 aa11.79□□□□□ -0.52
PFDN1-202ENST00000507185 QTRT2Q9H974 415 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms