RNA–Protein interactions for RNA: ENST00000507001.1

SPCS3-202, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 478 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-202ENST00000507001 PHLDB3Q6NSJ2 640 aa8.59□□□□□ -1.03
SPCS3-202ENST00000507001 PRR23CQ6ZRP0 262 aa8.59□□□□□ -1.03
SPCS3-202ENST00000507001 NPM2Q86SE8 214 aaKnown RBP8.59□□□□□ -1.03
SPCS3-202ENST00000507001 DZIP1LQ8IYY4 767 aaKnown RBP8.59□□□□□ -1.03
SPCS3-202ENST00000507001 MEGF10Q96KG7 1140 aa8.59□□□□□ -1.03
SPCS3-202ENST00000507001 DEAF1O75398 565 aaPredicted RBP8.58□□□□□ -1.04
SPCS3-202ENST00000507001 HOXD8P13378 290 aaPredicted RBP8.58□□□□□ -1.04
SPCS3-202ENST00000507001 PLAURQ03405 335 aa8.58□□□□□ -1.04
SPCS3-202ENST00000507001 KRT25Q7Z3Z0 450 aa8.58□□□□□ -1.04
SPCS3-202ENST00000507001 TMEM130Q8N3G9 435 aa8.58□□□□□ -1.04
SPCS3-202ENST00000507001 DCAF11Q8TEB1 546 aa8.58□□□□□ -1.04
SPCS3-202ENST00000507001 TLR7Q9NYK1 1049 aaKnown RBP8.58□□□□□ -1.04
SPCS3-202ENST00000507001 SASH3O75995 380 aa8.57□□□□□ -1.04
SPCS3-202ENST00000507001 LCE3BQ5TA77 95 aa8.57□□□□□ -1.04
SPCS3-202ENST00000507001 SMG9Q9H0W8 520 aaKnown RBP8.57□□□□□ -1.04
SPCS3-202ENST00000507001 PRMT3O60678 531 aa8.56□□□□□ -1.04
SPCS3-202ENST00000507001 SOX18P35713 384 aa8.56□□□□□ -1.04
SPCS3-202ENST00000507001 B4GALNT3Q6L9W6 998 aa8.56□□□□□ -1.04
SPCS3-202ENST00000507001 MAP4K3Q8IVH8 894 aa8.56□□□□□ -1.04
SPCS3-202ENST00000507001 MRPL18Q9H0U6 180 aaKnown RBP8.56□□□□□ -1.04
SPCS3-202ENST00000507001 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.56□□□□□ -1.04
SPCS3-202ENST00000507001 MTMR7Q9Y216 660 aa8.56□□□□□ -1.04
SPCS3-202ENST00000507001 LGR5O75473 907 aa8.55□□□□□ -1.04
SPCS3-202ENST00000507001 MLLT1Q03111 559 aaPredicted RBP8.55□□□□□ -1.04
SPCS3-202ENST00000507001 OCLNQ16625 522 aa8.55□□□□□ -1.04
SPCS3-202ENST00000507001 RGS22Q8NE09 1264 aa8.55□□□□□ -1.04
SPCS3-202ENST00000507001 PRIMPOLQ96LW4 560 aa8.55□□□□□ -1.04
SPCS3-202ENST00000507001 AKTIPQ9H8T0 292 aa8.55□□□□□ -1.04
SPCS3-202ENST00000507001 OPLAHO14841 1288 aa8.54□□□□□ -1.04
SPCS3-202ENST00000507001 EIF2AK2P19525 551 aaKnown RBP8.54□□□□□ -1.04
SPCS3-202ENST00000507001 ATP2B4P23634 1241 aa8.54□□□□□ -1.04
SPCS3-202ENST00000507001 SSFA2P28290 1259 aa8.54□□□□□ -1.04
SPCS3-202ENST00000507001 SCNN1AP37088 669 aa8.54□□□□□ -1.04
SPCS3-202ENST00000507001 Q6ZS46 218 aa8.54□□□□□ -1.04
SPCS3-202ENST00000507001 CACTIN-AS1Q8N1I8 211 aa8.54□□□□□ -1.04
SPCS3-202ENST00000507001 VTI1AQ96AJ9 217 aa8.54□□□□□ -1.04
SPCS3-202ENST00000507001 CXXC1Q9P0U4 656 aaPredicted RBP8.54□□□□□ -1.04
SPCS3-202ENST00000507001 GNEQ9Y223 722 aaKnown RBP8.54□□□□□ -1.04
SPCS3-202ENST00000507001 RTCBQ9Y3I0 505 aaKnown RBP8.54□□□□□ -1.04
SPCS3-202ENST00000507001 SND1Q7KZF4 910 aaKnown RBP eCLIP8.53□□□□□ -1.044e-12■■□□□ 11.4
SPCS3-202ENST00000507001 PLD4Q96BZ4 506 aa8.53□□□□□ -1.04
SPCS3-202ENST00000507001 LOC102724428A0A0B4J2F2 783 aa8.52□□□□□ -1.05
SPCS3-202ENST00000507001 F8W735 103 aaPredicted RBP8.52□□□□□ -1.05
SPCS3-202ENST00000507001 XYLBO75191 536 aa8.52□□□□□ -1.05
SPCS3-202ENST00000507001 PSAPP07602 524 aa8.52□□□□□ -1.05
SPCS3-202ENST00000507001 SIK1P57059 783 aa8.52□□□□□ -1.05
SPCS3-202ENST00000507001 TXNDC2Q86VQ3 553 aa8.52□□□□□ -1.05
SPCS3-202ENST00000507001 FOXD4L4Q8WXT5 416 aaPredicted RBP8.52□□□□□ -1.05
SPCS3-202ENST00000507001 LRFN2Q9ULH4 789 aa8.52□□□□□ -1.05
SPCS3-202ENST00000507001 FSTP19883 344 aa8.51□□□□□ -1.05
SPCS3-202ENST00000507001 RANGAP1P46060 587 aaPredicted RBP8.51□□□□□ -1.05
SPCS3-202ENST00000507001 HFE2Q6ZVN8 426 aa8.51□□□□□ -1.05
SPCS3-202ENST00000507001 KCNMB2Q9Y691 235 aa8.51□□□□□ -1.05
SPCS3-202ENST00000507001 GHRHP01286 108 aa8.5□□□□□ -1.05
SPCS3-202ENST00000507001 FKBP5Q13451 457 aaPredicted RBP8.5□□□□□ -1.05
SPCS3-202ENST00000507001 TREML1Q86YW5 311 aa8.5□□□□□ -1.05
SPCS3-202ENST00000507001 COL26A1Q96A83 441 aa8.5□□□□□ -1.05
SPCS3-202ENST00000507001 MUC3BQ9H195 1237 aa8.5□□□□□ -1.05
SPCS3-202ENST00000507001 RBSNQ9H1K0 784 aa8.5□□□□□ -1.05
SPCS3-202ENST00000507001 MMP20O60882 483 aa8.49□□□□□ -1.05
SPCS3-202ENST00000507001 PTCD1O75127 700 aaKnown RBP8.49□□□□□ -1.05
SPCS3-202ENST00000507001 SERPINB4P48594 390 aa8.49□□□□□ -1.05
SPCS3-202ENST00000507001 SETDB1Q15047 1291 aa8.49□□□□□ -1.05
SPCS3-202ENST00000507001 CCDC27Q2M243 656 aa8.49□□□□□ -1.05
SPCS3-202ENST00000507001 MCTP1Q6DN14 999 aa8.49□□□□□ -1.05
SPCS3-202ENST00000507001 RGL4Q8IZJ4 473 aa8.49□□□□□ -1.05
SPCS3-202ENST00000507001 CCER1Q8TC90 406 aaPredicted RBP8.49□□□□□ -1.05
SPCS3-202ENST00000507001 GSC2O15499 205 aa8.48□□□□□ -1.05
SPCS3-202ENST00000507001 CD97P48960 835 aa8.48□□□□□ -1.05
SPCS3-202ENST00000507001 KRTAP19-1Q8IUB9 90 aa8.48□□□□□ -1.05
SPCS3-202ENST00000507001 CMTR1Q8N1G2 835 aaKnown RBP8.48□□□□□ -1.05
SPCS3-202ENST00000507001 IL22RA1Q8N6P7 574 aa8.48□□□□□ -1.05
SPCS3-202ENST00000507001 PCMTD2Q9NV79 361 aa8.48□□□□□ -1.05
SPCS3-202ENST00000507001 USP20Q9Y2K6 914 aa8.47□□□□□ -1.05
SPCS3-202ENST00000507001 J3QW42 95 aa8.46□□□□□ -1.06
SPCS3-202ENST00000507001 COX20Q5RI15 118 aa8.46□□□□□ -1.06
SPCS3-202ENST00000507001 GDF6Q6KF10 455 aaPredicted RBP8.46□□□□□ -1.06
SPCS3-202ENST00000507001 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.46□□□□□ -1.06
SPCS3-202ENST00000507001 NLRP13Q86W25 1043 aa8.46□□□□□ -1.06
SPCS3-202ENST00000507001 ZNF428Q96B54 188 aa8.46□□□□□ -1.06
SPCS3-202ENST00000507001 NSUN5Q96P11 429 aaKnown RBP8.46□□□□□ -1.06
SPCS3-202ENST00000507001 GOLGA2P5Q9HBQ8 144 aa8.46□□□□□ -1.06
SPCS3-202ENST00000507001 COL17A1Q9UMD9 1497 aaPredicted RBP8.45□□□□□ -1.06
SPCS3-202ENST00000507001 ALX3O95076 343 aa8.45□□□□□ -1.06
SPCS3-202ENST00000507001 MKNK1Q9BUB5 465 aa8.45□□□□□ -1.06
SPCS3-202ENST00000507001 RAXQ9Y2V3 346 aa8.44□□□□□ -1.06
SPCS3-202ENST00000507001 SOWAHDA6NJG2 315 aa8.43□□□□□ -1.06
SPCS3-202ENST00000507001 KIAA1324LA8MWY0 1029 aaPredicted RBP8.43□□□□□ -1.06
SPCS3-202ENST00000507001 BRD2P25440 801 aaKnown RBP8.43□□□□□ -1.06
SPCS3-202ENST00000507001 TRIP4Q15650 581 aaPredicted RBP8.43□□□□□ -1.06
SPCS3-202ENST00000507001 UVSSAQ2YD98 709 aa8.43□□□□□ -1.06
SPCS3-202ENST00000507001 C16orf46Q6P387 395 aa8.43□□□□□ -1.06
SPCS3-202ENST00000507001 ETFBKMTQ8IXQ9 262 aa8.43□□□□□ -1.06
SPCS3-202ENST00000507001 OR13H1Q8NG92 308 aa8.43□□□□□ -1.06
SPCS3-202ENST00000507001 TRIM33Q9UPN9 1127 aa8.43□□□□□ -1.06
SPCS3-202ENST00000507001 PPME1Q9Y570 386 aa8.43□□□□□ -1.06
SPCS3-202ENST00000507001 IGLV1-40P01703 118 aa8.42□□□□□ -1.06
SPCS3-202ENST00000507001 ZNF211Q13398 564 aaPredicted RBP8.42□□□□□ -1.06
SPCS3-202ENST00000507001 CAPN12Q6ZSI9 719 aa8.42□□□□□ -1.06
SPCS3-202ENST00000507001 FAM13BQ9NYF5 915 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms