RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 IL27Q8NEV9 243 aa14.69□□□□□ -0.06
LIN54-206ENST00000506560 SLC27A2O14975 620 aa14.68□□□□□ -0.06
LIN54-206ENST00000506560 EPB41L2O43491 1005 aaKnown RBP14.68□□□□□ -0.06
LIN54-206ENST00000506560 VPS53Q5VIR6 699 aa14.68□□□□□ -0.06
LIN54-206ENST00000506560 GZF1Q9H116 711 aaPredicted RBP14.68□□□□□ -0.06
LIN54-206ENST00000506560 CNNM1Q9NRU3 951 aa14.68□□□□□ -0.06
LIN54-206ENST00000506560 ANKRD18BA2A2Z9 1011 aa14.68□□□□□ -0.06
LIN54-206ENST00000506560 BICDL1Q6ZP65 573 aa14.68□□□□□ -0.06
LIN54-206ENST00000506560 COL5A3P25940 1745 aaPredicted RBP14.68□□□□□ -0.06
LIN54-206ENST00000506560 HIP1O00291 1037 aa14.68□□□□□ -0.06
LIN54-206ENST00000506560 MEX3CQ5U5Q3 659 aaKnown RBP14.68□□□□□ -0.06
LIN54-206ENST00000506560 C3orf67Q6ZVT6 689 aa14.68□□□□□ -0.06
LIN54-206ENST00000506560 SMARCC1Q92922 1105 aaPredicted RBP14.68□□□□□ -0.06
LIN54-206ENST00000506560 RREB1Q92766 1687 aa14.68□□□□□ -0.06
LIN54-206ENST00000506560 SH3TC1Q8TE82 1336 aa14.67□□□□□ -0.06
LIN54-206ENST00000506560 CYP2E1P05181 493 aaPredicted RBP14.67□□□□□ -0.06
LIN54-206ENST00000506560 VGLL2Q8N8G2 317 aa14.67□□□□□ -0.06
LIN54-206ENST00000506560 AFF2P51816 1311 aa14.67□□□□□ -0.06
LIN54-206ENST00000506560 NTSR2O95665 410 aa14.67□□□□□ -0.06
LIN54-206ENST00000506560 CUL4AQ13619 759 aa14.67□□□□□ -0.06
LIN54-206ENST00000506560 ATP2B3Q16720 1220 aa14.67□□□□□ -0.06
LIN54-206ENST00000506560 KCNB2Q92953 911 aa14.67□□□□□ -0.06
LIN54-206ENST00000506560 UTP14AQ9BVJ6 771 aaKnown RBP14.67□□□□□ -0.06
LIN54-206ENST00000506560 SRP68Q9UHB9 627 aaKnown RBP14.67□□□□□ -0.06
LIN54-206ENST00000506560 TAF1P21675 1872 aa14.66□□□□□ -0.06
LIN54-206ENST00000506560 ZAP70P43403 619 aa14.66□□□□□ -0.06
LIN54-206ENST00000506560 GORABQ5T7V8 394 aa14.66□□□□□ -0.06
LIN54-206ENST00000506560 CCDC24Q8N4L8 307 aa14.66□□□□□ -0.06
LIN54-206ENST00000506560 SPATA31A6Q5VVP1 1343 aa14.66□□□□□ -0.06
LIN54-206ENST00000506560 TTC39AQ5SRH9 613 aa14.66□□□□□ -0.06
LIN54-206ENST00000506560 GJD4Q96KN9 370 aaPredicted RBP14.66□□□□□ -0.06
LIN54-206ENST00000506560 BTAF1O14981 1849 aa14.66□□□□□ -0.06
LIN54-206ENST00000506560 WTIPA6NIX2 430 aaPredicted RBP14.65□□□□□ -0.06
LIN54-206ENST00000506560 TRAK2O60296 914 aa14.65□□□□□ -0.06
LIN54-206ENST00000506560 MCAMP43121 646 aa14.65□□□□□ -0.06
LIN54-206ENST00000506560 BCL2L12Q9HB09 334 aa14.65□□□□□ -0.06
LIN54-206ENST00000506560 ZSWIM6Q9HCJ5 1215 aa14.65□□□□□ -0.06
LIN54-206ENST00000506560 MYO5AQ9Y4I1 1855 aaKnown RBP14.64□□□□□ -0.07
LIN54-206ENST00000506560 DDX60Q8IY21 1712 aaKnown RBP14.64□□□□□ -0.07
LIN54-206ENST00000506560 THSD7AQ9UPZ6 1657 aa14.64□□□□□ -0.07
LIN54-206ENST00000506560 BAG4O95429 457 aaKnown RBP14.64□□□□□ -0.07
LIN54-206ENST00000506560 ST3GAL1Q11201 340 aa14.64□□□□□ -0.07
LIN54-206ENST00000506560 MCMDC2Q4G0Z9 681 aa14.64□□□□□ -0.07
LIN54-206ENST00000506560 M0R2C6 588 aa14.64□□□□□ -0.07
LIN54-206ENST00000506560 PHKA1P46020 1223 aa14.64□□□□□ -0.07
LIN54-206ENST00000506560 OSBP2Q969R2 916 aa14.64□□□□□ -0.07
LIN54-206ENST00000506560 PDRG1Q9NUG6 133 aa14.64□□□□□ -0.07
LIN54-206ENST00000506560 MAST3O60307 1309 aa14.63□□□□□ -0.07
LIN54-206ENST00000506560 SPEF2Q9C093 1822 aa14.63□□□□□ -0.07
LIN54-206ENST00000506560 MCM2P49736 904 aa14.63□□□□□ -0.07
LIN54-206ENST00000506560 ERFEQ4G0M1 354 aa14.63□□□□□ -0.07
LIN54-206ENST00000506560 CCDC158Q5M9N0 1113 aa14.63□□□□□ -0.07
LIN54-206ENST00000506560 TBC1D9BQ66K14 1250 aa14.63□□□□□ -0.07
LIN54-206ENST00000506560 FBXO3Q9UK99 471 aa14.63□□□□□ -0.07
LIN54-206ENST00000506560 AKAP2Q9Y2D5 859 aa14.63□□□□□ -0.07
LIN54-206ENST00000506560 AKAP11Q9UKA4 1901 aa14.63□□□□□ -0.07
LIN54-206ENST00000506560 RPAP1Q9BWH6 1393 aaPredicted RBP14.63□□□□□ -0.07
LIN54-206ENST00000506560 PDE8BO95263 885 aa14.63□□□□□ -0.07
LIN54-206ENST00000506560 FOXD4L6Q3SYB3 417 aaPredicted RBP14.63□□□□□ -0.07
LIN54-206ENST00000506560 USPL1Q5W0Q7 1092 aa14.63□□□□□ -0.07
LIN54-206ENST00000506560 FOXD4L3Q6VB84 417 aaPredicted RBP14.63□□□□□ -0.07
LIN54-206ENST00000506560 CICQ96RK0 1608 aaPredicted RBP14.63□□□□□ -0.07
LIN54-206ENST00000506560 GNPATO15228 680 aa14.62□□□□□ -0.07
LIN54-206ENST00000506560 CYP21A2P08686 494 aa14.62□□□□□ -0.07
LIN54-206ENST00000506560 ZKSCAN1P17029 563 aaPredicted RBP14.62□□□□□ -0.07
LIN54-206ENST00000506560 ZMYM1Q5SVZ6 1142 aa14.62□□□□□ -0.07
LIN54-206ENST00000506560 NECAB1Q8N987 351 aa14.62□□□□□ -0.07
LIN54-206ENST00000506560 CWC22Q9HCG8 908 aaKnown RBP14.62□□□□□ -0.07
LIN54-206ENST00000506560 RTN4Q9NQC3 1192 aaKnown RBP14.62□□□□□ -0.07
LIN54-206ENST00000506560 STOX1Q6ZVD7 989 aa14.62□□□□□ -0.07
LIN54-206ENST00000506560 CCNL1Q9UK58 526 aaPredicted RBP14.62□□□□□ -0.07
LIN54-206ENST00000506560 CYP46A1Q9Y6A2 500 aa14.62□□□□□ -0.07
LIN54-206ENST00000506560 ME3Q16798 604 aa14.62□□□□□ -0.07
LIN54-206ENST00000506560 TTLL5Q6EMB2 1281 aa14.62□□□□□ -0.07
LIN54-206ENST00000506560 CCDC83Q8IWF9 413 aa14.62□□□□□ -0.07
LIN54-206ENST00000506560 SEPT12Q8IYM1 358 aa14.62□□□□□ -0.07
LIN54-206ENST00000506560 GBP4Q96PP9 640 aa14.62□□□□□ -0.07
LIN54-206ENST00000506560 TPCN1Q9ULQ1 816 aa14.62□□□□□ -0.07
LIN54-206ENST00000506560 LIMCH1Q9UPQ0 1083 aa14.62□□□□□ -0.07
LIN54-206ENST00000506560 RNF113AO15541 343 aaKnown RBP14.61□□□□□ -0.07
LIN54-206ENST00000506560 NUCB2P80303 420 aa14.61□□□□□ -0.07
LIN54-206ENST00000506560 MCTP1Q6DN14 999 aa14.61□□□□□ -0.07
LIN54-206ENST00000506560 SLC51AQ86UW1 340 aa14.61□□□□□ -0.07
LIN54-206ENST00000506560 LRRC2Q9BYS8 371 aa14.61□□□□□ -0.07
LIN54-206ENST00000506560 BCORQ6W2J9 1755 aa14.61□□□□□ -0.07
LIN54-206ENST00000506560 FOXP2O15409 715 aa14.61□□□□□ -0.07
LIN54-206ENST00000506560 PARP10Q53GL7 1025 aa14.61□□□□□ -0.07
LIN54-206ENST00000506560 CCDC102BQ68D86 513 aa14.61□□□□□ -0.07
LIN54-206ENST00000506560 RFX7Q2KHR2 1363 aa14.6□□□□□ -0.07
LIN54-206ENST00000506560 ABCC12Q96J65 1359 aa14.6□□□□□ -0.07
LIN54-206ENST00000506560 DDX11L8A8MPP1 907 aa14.6□□□□□ -0.07
LIN54-206ENST00000506560 PHF14O94880 888 aa14.6□□□□□ -0.07
LIN54-206ENST00000506560 TM6SF1Q9BZW5 370 aa14.6□□□□□ -0.07
LIN54-206ENST00000506560 PUS7LQ9H0K6 701 aaKnown RBP14.6□□□□□ -0.07
LIN54-206ENST00000506560 LRP5O75197 1615 aa14.6□□□□□ -0.07
LIN54-206ENST00000506560 CNTNAP4Q9C0A0 1308 aa14.6□□□□□ -0.07
LIN54-206ENST00000506560 HSPD1P10809 573 aaKnown RBP14.6□□□□□ -0.07
LIN54-206ENST00000506560 PIH1D3Q9NQM4 214 aaKnown RBP14.6□□□□□ -0.07
LIN54-206ENST00000506560 FGFR2P21802 821 aa14.59□□□□□ -0.07
LIN54-206ENST00000506560 TOB2Q14106 344 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms