RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 CCDC102AQ96A19 550 aa13.7□□□□□ -0.22
CPNE4-206ENST00000505957 ZIC5Q96T25 663 aa13.7□□□□□ -0.22
CPNE4-206ENST00000505957 ZBTB12Q9Y330 459 aaPredicted RBP13.7□□□□□ -0.22
CPNE4-206ENST00000505957 DUOX1Q9NRD9 1551 aa13.7□□□□□ -0.22
CPNE4-206ENST00000505957 FAM155AB1AL88 458 aaPredicted RBP13.69□□□□□ -0.22
CPNE4-206ENST00000505957 SAMD7Q7Z3H4 446 aa13.69□□□□□ -0.22
CPNE4-206ENST00000505957 C2orf69Q8N8R5 385 aa13.69□□□□□ -0.22
CPNE4-206ENST00000505957 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.69□□□□□ -0.22
CPNE4-206ENST00000505957 PLBD2Q8NHP8 589 aa13.69□□□□□ -0.22
CPNE4-206ENST00000505957 ISCA1Q9BUE6 129 aa13.69□□□□□ -0.22
CPNE4-206ENST00000505957 GBA2Q9HCG7 927 aaPredicted RBP13.69□□□□□ -0.22
CPNE4-206ENST00000505957 NSFL1CQ9UNZ2 370 aaKnown RBP13.69□□□□□ -0.22
CPNE4-206ENST00000505957 CHL1O00533 1208 aa13.68□□□□□ -0.22
CPNE4-206ENST00000505957 ANKRD13DQ6ZTN6 518 aa13.68□□□□□ -0.22
CPNE4-206ENST00000505957 NECTIN2Q92692 538 aa13.68□□□□□ -0.22
CPNE4-206ENST00000505957 CELF1Q92879 486 aaKnown RBP13.68□□□□□ -0.22
CPNE4-206ENST00000505957 DCPSQ96C86 337 aaKnown RBP13.68□□□□□ -0.22
CPNE4-206ENST00000505957 EYA3Q99504 573 aa13.68□□□□□ -0.22
CPNE4-206ENST00000505957 DBNDD1Q9H9R9 158 aa13.68□□□□□ -0.22
CPNE4-206ENST00000505957 POLLQ9UGP5 575 aa13.68□□□□□ -0.22
CPNE4-206ENST00000505957 LAMB2P55268 1798 aa13.68□□□□□ -0.22
CPNE4-206ENST00000505957 LRRC37AA6NMS7 1700 aa13.67□□□□□ -0.22
CPNE4-206ENST00000505957 FANCIQ9NVI1 1328 aa13.67□□□□□ -0.22
CPNE4-206ENST00000505957 HOXB7P09629 217 aa13.67□□□□□ -0.22
CPNE4-206ENST00000505957 TRIM28Q13263 835 aaKnown RBP13.67□□□□□ -0.22
CPNE4-206ENST00000505957 TBC1D10BQ4KMP7 808 aaPredicted RBP13.67□□□□□ -0.22
CPNE4-206ENST00000505957 CFAP44Q96MT7 982 aa13.67□□□□□ -0.22
CPNE4-206ENST00000505957 IFT57Q9NWB7 429 aa13.67□□□□□ -0.22
CPNE4-206ENST00000505957 CHPF2Q9P2E5 772 aa13.67□□□□□ -0.22
CPNE4-206ENST00000505957 PCDH10Q9P2E7 1040 aa13.67□□□□□ -0.22
CPNE4-206ENST00000505957 CASP8AP2Q9UKL3 1982 aa13.67□□□□□ -0.22
CPNE4-206ENST00000505957 C6orf229H3BNL8 230 aa13.66□□□□□ -0.22
CPNE4-206ENST00000505957 RIMBP2O15034 1052 aa13.66□□□□□ -0.22
CPNE4-206ENST00000505957 ECE2O60344 883 aa13.66□□□□□ -0.22
CPNE4-206ENST00000505957 EGFRP00533 1210 aa13.66□□□□□ -0.22
CPNE4-206ENST00000505957 VIL1P09327 827 aaKnown RBP13.66□□□□□ -0.22
CPNE4-206ENST00000505957 ZNF853P0CG23 659 aa13.66□□□□□ -0.22
CPNE4-206ENST00000505957 GPSM2P81274 684 aa13.66□□□□□ -0.22
CPNE4-206ENST00000505957 KIF23Q02241 960 aaPredicted RBP13.66□□□□□ -0.22
CPNE4-206ENST00000505957 DLK2Q6UY11 383 aa13.66□□□□□ -0.22
CPNE4-206ENST00000505957 ZNF428Q96B54 188 aa13.66□□□□□ -0.22
CPNE4-206ENST00000505957 FAM89AQ96GI7 184 aa13.66□□□□□ -0.22
CPNE4-206ENST00000505957 RTL9Q8NET4 1388 aa13.66□□□□□ -0.22
CPNE4-206ENST00000505957 ZNF157P51786 506 aaPredicted RBP13.65□□□□□ -0.22
CPNE4-206ENST00000505957 RPS8P62241 208 aaKnown RBP13.65□□□□□ -0.22
CPNE4-206ENST00000505957 IRX6P78412 446 aaPredicted RBP13.65□□□□□ -0.22
CPNE4-206ENST00000505957 HDGFL1Q5TGJ6 251 aa13.65□□□□□ -0.22
CPNE4-206ENST00000505957 REM2Q8IYK8 340 aaPredicted RBP13.65□□□□□ -0.22
CPNE4-206ENST00000505957 TBC1D16Q8TBP0 767 aa13.65□□□□□ -0.22
CPNE4-206ENST00000505957 KCNQ5Q9NR82 932 aa13.65□□□□□ -0.22
CPNE4-206ENST00000505957 PODXL2Q9NZ53 605 aa13.65□□□□□ -0.22
CPNE4-206ENST00000505957 DBF4Q9UBU7 674 aaPredicted RBP13.65□□□□□ -0.22
CPNE4-206ENST00000505957 ADM5C9JUS6 153 aa13.64□□□□□ -0.23
CPNE4-206ENST00000505957 SLC10A3P09131 477 aa13.64□□□□□ -0.23
CPNE4-206ENST00000505957 GNAI1P63096 354 aa13.64□□□□□ -0.23
CPNE4-206ENST00000505957 DOK7Q18PE1 504 aa13.64□□□□□ -0.23
CPNE4-206ENST00000505957 KRT24Q2M2I5 525 aa13.64□□□□□ -0.23
CPNE4-206ENST00000505957 KIF4BQ2VIQ3 1234 aa13.64□□□□□ -0.23
CPNE4-206ENST00000505957 RBM26Q5T8P6 1007 aaKnown RBP13.64□□□□□ -0.23
CPNE4-206ENST00000505957 SULF1Q8IWU6 871 aa13.64□□□□□ -0.23
CPNE4-206ENST00000505957 ZC3H12CQ9C0D7 883 aaKnown RBP13.64□□□□□ -0.23
CPNE4-206ENST00000505957 HYPKQ9NX55 129 aa13.64□□□□□ -0.23
CPNE4-206ENST00000505957 RNF186Q9NXI6 227 aa13.64□□□□□ -0.23
CPNE4-206ENST00000505957 ATP5J2-PTCD1G3V325 749 aa13.63□□□□□ -0.23
CPNE4-206ENST00000505957 IRS4O14654 1257 aaPredicted RBP13.63□□□□□ -0.23
CPNE4-206ENST00000505957 HSP90B1P14625 803 aaKnown RBP13.63□□□□□ -0.23
CPNE4-206ENST00000505957 RARSP54136 660 aaKnown RBP13.63□□□□□ -0.23
CPNE4-206ENST00000505957 ZNF280AP59817 542 aaPredicted RBP13.63□□□□□ -0.23
CPNE4-206ENST00000505957 CSRNP1Q96S65 589 aa13.63□□□□□ -0.23
CPNE4-206ENST00000505957 ZNF609O15014 1411 aa13.63□□□□□ -0.23
CPNE4-206ENST00000505957 DDX60Q8IY21 1712 aaKnown RBP13.62□□□□□ -0.23
CPNE4-206ENST00000505957 TAF1P21675 1872 aa13.62□□□□□ -0.23
CPNE4-206ENST00000505957 TRPA1O75762 1119 aa13.62□□□□□ -0.23
CPNE4-206ENST00000505957 FKBP1BP68106 108 aa13.62□□□□□ -0.23
CPNE4-206ENST00000505957 ZBTB38Q8NAP3 1195 aaPredicted RBP13.62□□□□□ -0.23
CPNE4-206ENST00000505957 AGBL3Q8NEM8 1001 aa13.62□□□□□ -0.23
CPNE4-206ENST00000505957 GGA3Q9NZ52 723 aa13.62□□□□□ -0.23
CPNE4-206ENST00000505957 PDE3AQ14432 1141 aa13.61□□□□□ -0.23
CPNE4-206ENST00000505957 CDCA5Q96FF9 252 aa13.61□□□□□ -0.23
CPNE4-206ENST00000505957 LAS1LQ9Y4W2 734 aaKnown RBP13.61□□□□□ -0.23
CPNE4-206ENST00000505957 G3V3G9 751 aa13.6□□□□□ -0.23
CPNE4-206ENST00000505957 SCARF1Q14162 830 aa13.6□□□□□ -0.23
CPNE4-206ENST00000505957 ALDH1L2Q3SY69 923 aa13.6□□□□□ -0.23
CPNE4-206ENST00000505957 RTL5Q5HYW3 569 aaPredicted RBP13.6□□□□□ -0.23
CPNE4-206ENST00000505957 DCAF8Q5TAQ9 597 aa13.6□□□□□ -0.23
CPNE4-206ENST00000505957 RSBN1LQ6PCB5 846 aaPredicted RBP13.6□□□□□ -0.23
CPNE4-206ENST00000505957 CTU1Q7Z7A3 348 aaKnown RBP13.6□□□□□ -0.23
CPNE4-206ENST00000505957 ANKIB1Q9P2G1 1089 aa13.6□□□□□ -0.23
CPNE4-206ENST00000505957 GGA1Q9UJY5 639 aa13.6□□□□□ -0.23
CPNE4-206ENST00000505957 PITPNM2Q9BZ72 1349 aa13.6□□□□□ -0.23
CPNE4-206ENST00000505957 UFL1O94874 794 aa13.59□□□□□ -0.23
CPNE4-206ENST00000505957 EXOSC9Q06265 439 aaKnown RBP13.59□□□□□ -0.23
CPNE4-206ENST00000505957 CCDC152Q4G0S7 254 aa13.59□□□□□ -0.23
CPNE4-206ENST00000505957 ANGEL2Q5VTE6 544 aaKnown RBP13.59□□□□□ -0.23
CPNE4-206ENST00000505957 RASAL3Q86YV0 1011 aa13.59□□□□□ -0.23
CPNE4-206ENST00000505957 TSR2Q969E8 191 aaKnown RBP13.59□□□□□ -0.23
CPNE4-206ENST00000505957 GMLQ99445 158 aa13.59□□□□□ -0.23
CPNE4-206ENST00000505957 SEC31BQ9NQW1 1179 aa13.59□□□□□ -0.23
CPNE4-206ENST00000505957 COL4A1P02462 1669 aa13.59□□□□□ -0.23
CPNE4-206ENST00000505957 ASTN2O75129 1339 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms