RNA–Protein interactions for RNA: ENST00000505937.2

PCDH1-205, Transcript of protocadherin 1, humanhuman

TSL 5

Gene PCDH1, Length 825 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-205ENST00000505937 NBPF7P0C2Y1 421 aaPredicted RBP19.48■□□□□ 0.71
PCDH1-205ENST00000505937 DCAF8Q5TAQ9 597 aa19.48■□□□□ 0.71
PCDH1-205ENST00000505937 L3MBTL3Q96JM7 780 aaPredicted RBP19.48■□□□□ 0.71
PCDH1-205ENST00000505937 ZC3H12CQ9C0D7 883 aaKnown RBP19.48■□□□□ 0.71
PCDH1-205ENST00000505937 POLLQ9UGP5 575 aa19.48■□□□□ 0.71
PCDH1-205ENST00000505937 HDAC5Q9UQL6 1122 aa19.48■□□□□ 0.71
PCDH1-205ENST00000505937 GJA3Q9Y6H8 435 aa19.48■□□□□ 0.71
PCDH1-205ENST00000505937 MYH3P11055 1940 aa19.48■□□□□ 0.71
PCDH1-205ENST00000505937 ATP2B4P23634 1241 aa19.47■□□□□ 0.71
PCDH1-205ENST00000505937 RBM46Q8TBY0 533 aaKnown RBP19.47■□□□□ 0.71
PCDH1-205ENST00000505937 FRAT1Q92837 279 aaPredicted RBP19.47■□□□□ 0.71
PCDH1-205ENST00000505937 SUCLG2Q96I99 432 aa19.47■□□□□ 0.71
PCDH1-205ENST00000505937 ANKRD2Q9GZV1 360 aa19.47■□□□□ 0.71
PCDH1-205ENST00000505937 MINPP1Q9UNW1 487 aa19.47■□□□□ 0.71
PCDH1-205ENST00000505937 RIMBP2O15034 1052 aa19.46■□□□□ 0.71
PCDH1-205ENST00000505937 EPHA10Q5JZY3 1008 aa19.46■□□□□ 0.71
PCDH1-205ENST00000505937 USP44Q9H0E7 712 aa19.46■□□□□ 0.71
PCDH1-205ENST00000505937 BCAR3O75815 825 aa19.45■□□□□ 0.7
PCDH1-205ENST00000505937 LMOD1P29536 600 aaPredicted RBP19.45■□□□□ 0.7
PCDH1-205ENST00000505937 TNIP1Q15025 636 aa19.45■□□□□ 0.7
PCDH1-205ENST00000505937 ATF7IPQ6VMQ6 1270 aa19.45■□□□□ 0.7
PCDH1-205ENST00000505937 COL4A1P02462 1669 aa19.44■□□□□ 0.7
PCDH1-205ENST00000505937 UBTFL1P0CB47 393 aaPredicted RBP19.44■□□□□ 0.7
PCDH1-205ENST00000505937 KCNJ4P48050 445 aa19.44■□□□□ 0.7
PCDH1-205ENST00000505937 ZKSCAN2Q63HK3 967 aa19.44■□□□□ 0.7
PCDH1-205ENST00000505937 CIAPIN1Q6FI81 312 aa19.44■□□□□ 0.7
PCDH1-205ENST00000505937 BICC1Q9H694 974 aaKnown RBP19.44■□□□□ 0.7
PCDH1-205ENST00000505937 HACL1Q9UJ83 578 aa19.44■□□□□ 0.7
PCDH1-205ENST00000505937 LEMD3Q9Y2U8 911 aa19.44■□□□□ 0.7
PCDH1-205ENST00000505937 WDR90Q96KV7 1748 aa19.44■□□□□ 0.7
PCDH1-205ENST00000505937 DUOX1Q9NRD9 1551 aa19.44■□□□□ 0.7
PCDH1-205ENST00000505937 COL4A5P29400 1685 aa19.43■□□□□ 0.7
PCDH1-205ENST00000505937 CXCL9Q07325 125 aa19.43■□□□□ 0.7
PCDH1-205ENST00000505937 SMC1BQ8NDV3 1235 aa19.43■□□□□ 0.7
PCDH1-205ENST00000505937 DBNDD1Q9H9R9 158 aa19.43■□□□□ 0.7
PCDH1-205ENST00000505937 CNNM1Q9NRU3 951 aa19.43■□□□□ 0.7
PCDH1-205ENST00000505937 POTECB2RU33 542 aa19.42■□□□□ 0.7
PCDH1-205ENST00000505937 RAD17O75943 681 aa19.42■□□□□ 0.7
PCDH1-205ENST00000505937 TRIM27P14373 513 aa19.42■□□□□ 0.7
PCDH1-205ENST00000505937 FSTL1Q12841 308 aa19.42■□□□□ 0.7
PCDH1-205ENST00000505937 RABL6Q3YEC7 729 aaPredicted RBP19.42■□□□□ 0.7
PCDH1-205ENST00000505937 INTS3Q68E01 1043 aaKnown RBP19.42■□□□□ 0.7
PCDH1-205ENST00000505937 LDHAL6AQ6ZMR3 332 aa19.42■□□□□ 0.7
PCDH1-205ENST00000505937 GPR101Q96P66 508 aaPredicted RBP19.42■□□□□ 0.7
PCDH1-205ENST00000505937 ECE2O60344 883 aa19.41■□□□□ 0.7
PCDH1-205ENST00000505937 CHRNDQ07001 517 aa19.41■□□□□ 0.7
PCDH1-205ENST00000505937 DOK7Q18PE1 504 aa19.41■□□□□ 0.7
PCDH1-205ENST00000505937 KAZALD1Q96I82 304 aa19.41■□□□□ 0.7
PCDH1-205ENST00000505937 TAF1DQ9H5J8 278 aaPredicted RBP19.41■□□□□ 0.7
PCDH1-205ENST00000505937 EPHX2P34913 555 aa19.4■□□□□ 0.7
PCDH1-205ENST00000505937 PNMA8AQ86V59 439 aaPredicted RBP19.4■□□□□ 0.7
PCDH1-205ENST00000505937 FTSJ3Q8IY81 847 aaKnown RBP19.4■□□□□ 0.7
PCDH1-205ENST00000505937 ZNF804BA4D1E1 1349 aa19.4■□□□□ 0.7
PCDH1-205ENST00000505937 YDJCA8MPS7 323 aa19.39■□□□□ 0.69
PCDH1-205ENST00000505937 GNAI3P08754 354 aa19.39■□□□□ 0.69
PCDH1-205ENST00000505937 ANKRD44Q8N8A2 993 aa19.39■□□□□ 0.69
PCDH1-205ENST00000505937 CLUAP1Q96AJ1 413 aa19.39■□□□□ 0.69
PCDH1-205ENST00000505937 ZNF594Q96JF6 807 aaPredicted RBP19.39■□□□□ 0.69
PCDH1-205ENST00000505937 MED23Q9ULK4 1368 aa19.39■□□□□ 0.69
PCDH1-205ENST00000505937 LTBP1Q14766 1721 aa19.38■□□□□ 0.69
PCDH1-205ENST00000505937 EAPPQ56P03 285 aaPredicted RBP19.38■□□□□ 0.69
PCDH1-205ENST00000505937 LDHDQ86WU2 507 aa19.38■□□□□ 0.69
PCDH1-205ENST00000505937 GMPSP49915 693 aaPredicted RBP19.37■□□□□ 0.69
PCDH1-205ENST00000505937 SCNN1DP51172 638 aa19.37■□□□□ 0.69
PCDH1-205ENST00000505937 PODNQ7Z5L7 613 aa19.37■□□□□ 0.69
PCDH1-205ENST00000505937 PSMD14O00487 310 aa19.36■□□□□ 0.69
PCDH1-205ENST00000505937 HSPA6P17066 643 aa19.36■□□□□ 0.69
PCDH1-205ENST00000505937 CHADLQ6NUI6 762 aa19.36■□□□□ 0.69
PCDH1-205ENST00000505937 HELBQ8NG08 1087 aaPredicted RBP19.36■□□□□ 0.69
PCDH1-205ENST00000505937 MEIS3Q99687 375 aa19.36■□□□□ 0.69
PCDH1-205ENST00000505937 COA1Q9GZY4 146 aa19.36■□□□□ 0.69
PCDH1-205ENST00000505937 GPRC5DQ9NZD1 345 aa19.36■□□□□ 0.69
PCDH1-205ENST00000505937 CLEC11AQ9Y240 323 aa19.36■□□□□ 0.69
PCDH1-205ENST00000505937 LRRFIP2Q9Y608 721 aaKnown RBP19.36■□□□□ 0.69
PCDH1-205ENST00000505937 SCN4AP35499 1836 aa19.36■□□□□ 0.69
PCDH1-205ENST00000505937 MROH5Q6ZUA9 1318 aa19.35■□□□□ 0.69
PCDH1-205ENST00000505937 PLIN1O60240 522 aa19.35■□□□□ 0.69
PCDH1-205ENST00000505937 TAF5LO75529 589 aa19.35■□□□□ 0.69
PCDH1-205ENST00000505937 RPS12P25398 132 aaKnown RBP19.35■□□□□ 0.69
PCDH1-205ENST00000505937 DZIP1LQ8IYY4 767 aaKnown RBP19.35■□□□□ 0.69
PCDH1-205ENST00000505937 SPEF2Q9C093 1822 aa19.35■□□□□ 0.69
PCDH1-205ENST00000505937 H7C1D1 291 aa19.34■□□□□ 0.69
PCDH1-205ENST00000505937 MS4A1P11836 297 aa19.34■□□□□ 0.69
PCDH1-205ENST00000505937 EPS15P42566 896 aa19.34■□□□□ 0.69
PCDH1-205ENST00000505937 USP50Q70EL3 339 aaPredicted RBP19.34■□□□□ 0.69
PCDH1-205ENST00000505937 DPF2Q92785 391 aa19.34■□□□□ 0.69
PCDH1-205ENST00000505937 ADARB2Q9NS39 739 aaKnown RBP19.34■□□□□ 0.69
PCDH1-205ENST00000505937 METTL24Q5JXM2 366 aa19.33■□□□□ 0.68
PCDH1-205ENST00000505937 TMEM57Q8N5G2 664 aa19.33■□□□□ 0.68
PCDH1-205ENST00000505937 USP17L3A6NCW0 530 aa19.32■□□□□ 0.68
PCDH1-205ENST00000505937 USP17L4A6NCW7 530 aa19.32■□□□□ 0.68
PCDH1-205ENST00000505937 WTIPA6NIX2 430 aaPredicted RBP19.32■□□□□ 0.68
PCDH1-205ENST00000505937 GNAI2P04899 355 aa19.32■□□□□ 0.68
PCDH1-205ENST00000505937 VIL1P09327 827 aaKnown RBP19.32■□□□□ 0.68
PCDH1-205ENST00000505937 APLP1P51693 650 aa19.32■□□□□ 0.68
PCDH1-205ENST00000505937 UBE4AQ14139 1066 aa19.32■□□□□ 0.68
PCDH1-205ENST00000505937 C15orf52Q6ZUT6 534 aaKnown RBP19.32■□□□□ 0.68
PCDH1-205ENST00000505937 USP17L1Q7RTZ2 530 aa19.32■□□□□ 0.68
PCDH1-205ENST00000505937 ZNF804AQ7Z570 1209 aa19.32■□□□□ 0.68
PCDH1-205ENST00000505937 PUS3Q9BZE2 481 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms