RNA–Protein interactions for RNA: ENST00000505306.5

ITGA3-204, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 5,479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-204ENST00000505306 CCDC150Q8NCX0 1101 aa19.13■□□□□ 0.65
ITGA3-204ENST00000505306 SCAND2PQ9GZW5 306 aaPredicted RBP19.13■□□□□ 0.65
ITGA3-204ENST00000505306 KLF18A0A0U1RQI7 1052 aa19.13■□□□□ 0.65
ITGA3-204ENST00000505306 GNAQP50148 359 aa19.13■□□□□ 0.65
ITGA3-204ENST00000505306 PLEKHG3A1L390 1219 aa19.12■□□□□ 0.65
ITGA3-204ENST00000505306 H0YHG0 523 aa19.12■□□□□ 0.65
ITGA3-204ENST00000505306 ITGA6P23229 1130 aa19.12■□□□□ 0.65
ITGA3-204ENST00000505306 ZHX1Q9UKY1 873 aaPredicted RBP19.12■□□□□ 0.65
ITGA3-204ENST00000505306 SMTNL1A8MU46 457 aa19.12■□□□□ 0.65
ITGA3-204ENST00000505306 VAMP4O75379 141 aa19.12■□□□□ 0.65
ITGA3-204ENST00000505306 BCS1LQ9Y276 419 aa19.12■□□□□ 0.65
ITGA3-204ENST00000505306 TAF3Q5VWG9 929 aa19.12■□□□□ 0.65
ITGA3-204ENST00000505306 DENND2AQ9ULE3 1009 aa19.12■□□□□ 0.65
ITGA3-204ENST00000505306 NPHP4O75161 1426 aaPredicted RBP19.12■□□□□ 0.65
ITGA3-204ENST00000505306 ZBTB43O43298 467 aa19.12■□□□□ 0.65
ITGA3-204ENST00000505306 BEGAINQ9BUH8 593 aa19.12■□□□□ 0.65
ITGA3-204ENST00000505306 GNAT2P19087 354 aa19.11■□□□□ 0.65
ITGA3-204ENST00000505306 SMARCC2Q8TAQ2 1214 aa19.11■□□□□ 0.65
ITGA3-204ENST00000505306 BICC1Q9H694 974 aaKnown RBP19.11■□□□□ 0.65
ITGA3-204ENST00000505306 PDE8AO60658 829 aa19.11■□□□□ 0.65
ITGA3-204ENST00000505306 HIBADHP31937 336 aaKnown RBP19.11■□□□□ 0.65
ITGA3-204ENST00000505306 UBA7P41226 1012 aa19.11■□□□□ 0.65
ITGA3-204ENST00000505306 ERICH4A6NGS2 130 aa19.11■□□□□ 0.65
ITGA3-204ENST00000505306 BMP2KLQ5H9B9 411 aa19.11■□□□□ 0.65
ITGA3-204ENST00000505306 TBC1D9Q6ZT07 1266 aa19.11■□□□□ 0.65
ITGA3-204ENST00000505306 HEATR3Q7Z4Q2 680 aa19.11■□□□□ 0.65
ITGA3-204ENST00000505306 SUPT20HQ8NEM7 779 aa19.11■□□□□ 0.65
ITGA3-204ENST00000505306 FLAD1Q8NFF5 587 aa19.11■□□□□ 0.65
ITGA3-204ENST00000505306 NBPF7P0C2Y1 421 aaPredicted RBP19.11■□□□□ 0.65
ITGA3-204ENST00000505306 IL13P35225 146 aa19.11■□□□□ 0.65
ITGA3-204ENST00000505306 TTC6Q86TZ1 520 aa19.11■□□□□ 0.65
ITGA3-204ENST00000505306 BRF1Q92994 677 aa19.11■□□□□ 0.65
ITGA3-204ENST00000505306 CAMK4Q16566 473 aa19.1■□□□□ 0.65
ITGA3-204ENST00000505306 LEKR1Q6ZMV7 388 aa19.1■□□□□ 0.65
ITGA3-204ENST00000505306 CCDC191Q8NCU4 936 aa19.1■□□□□ 0.65
ITGA3-204ENST00000505306 SOS1Q07889 1333 aaPredicted RBP19.1■□□□□ 0.65
ITGA3-204ENST00000505306 MAP3K11Q16584 847 aa19.1■□□□□ 0.65
ITGA3-204ENST00000505306 METTL22Q9BUU2 404 aaPredicted RBP19.1■□□□□ 0.65
ITGA3-204ENST00000505306 CA8P35219 290 aa19.09■□□□□ 0.65
ITGA3-204ENST00000505306 PDE1AP54750 535 aa19.09■□□□□ 0.65
ITGA3-204ENST00000505306 DRC1Q96MC2 740 aa19.09■□□□□ 0.65
ITGA3-204ENST00000505306 RTN1Q16799 776 aa19.09■□□□□ 0.65
ITGA3-204ENST00000505306 TEX11Q8IYF3 940 aa19.09■□□□□ 0.65
ITGA3-204ENST00000505306 CCDC148Q8NFR7 591 aa19.09■□□□□ 0.65
ITGA3-204ENST00000505306 PICK1Q9NRD5 415 aa19.09■□□□□ 0.65
ITGA3-204ENST00000505306 DYNC1I1O14576 645 aa19.09■□□□□ 0.65
ITGA3-204ENST00000505306 AMPD3Q01432 767 aa19.09■□□□□ 0.65
ITGA3-204ENST00000505306 FKBP15Q5T1M5 1219 aa19.09■□□□□ 0.65
ITGA3-204ENST00000505306 NIM1KQ8IY84 436 aa19.09■□□□□ 0.65
ITGA3-204ENST00000505306 STXBP4Q6ZWJ1 553 aa19.08■□□□□ 0.65
ITGA3-204ENST00000505306 PDE6BP35913 854 aa19.08■□□□□ 0.65
ITGA3-204ENST00000505306 CFAP100Q494V2 611 aa19.08■□□□□ 0.65
ITGA3-204ENST00000505306 ERCC4Q92889 916 aaPredicted RBP19.08■□□□□ 0.65
ITGA3-204ENST00000505306 LRRC2Q9BYS8 371 aa19.08■□□□□ 0.65
ITGA3-204ENST00000505306 RNF113AO15541 343 aaKnown RBP19.08■□□□□ 0.64
ITGA3-204ENST00000505306 SYCP3Q8IZU3 236 aa19.08■□□□□ 0.64
ITGA3-204ENST00000505306 CNNM3Q8NE01 707 aa19.08■□□□□ 0.64
ITGA3-204ENST00000505306 ZNF397Q8NF99 534 aaPredicted RBP19.08■□□□□ 0.64
ITGA3-204ENST00000505306 ERMNQ8TAM6 284 aa19.08■□□□□ 0.64
ITGA3-204ENST00000505306 ERVV-2B6SEH9 535 aa19.07■□□□□ 0.64
ITGA3-204ENST00000505306 FGFR1OPO95684 399 aaKnown RBP19.07■□□□□ 0.64
ITGA3-204ENST00000505306 ALDH1B1P30837 517 aa19.07■□□□□ 0.64
ITGA3-204ENST00000505306 SKIDA1Q1XH10 827 aa19.07■□□□□ 0.64
ITGA3-204ENST00000505306 KLHL40Q2TBA0 621 aa19.07■□□□□ 0.64
ITGA3-204ENST00000505306 ZNF496Q96IT1 587 aaPredicted RBP19.07■□□□□ 0.64
ITGA3-204ENST00000505306 BABAM1Q9NWV8 329 aa19.07■□□□□ 0.64
ITGA3-204ENST00000505306 NAPAP54920 295 aa19.07■□□□□ 0.64
ITGA3-204ENST00000505306 MAPK8IP2Q13387 824 aaPredicted RBP19.07■□□□□ 0.64
ITGA3-204ENST00000505306 BICD1Q96G01 975 aa19.07■□□□□ 0.64
ITGA3-204ENST00000505306 PARD3Q8TEW0 1356 aa19.06■□□□□ 0.64
ITGA3-204ENST00000505306 RAB3GAP1Q15042 981 aa19.06■□□□□ 0.64
ITGA3-204ENST00000505306 SH2D4AQ9H788 454 aa19.06■□□□□ 0.64
ITGA3-204ENST00000505306 RBM8AQ9Y5S9 174 aaKnown RBP19.06■□□□□ 0.64
ITGA3-204ENST00000505306 DNMT1P26358 1616 aaKnown RBP19.06■□□□□ 0.64
ITGA3-204ENST00000505306 ERLIN2O94905 339 aa19.06■□□□□ 0.64
ITGA3-204ENST00000505306 SDSP20132 328 aa19.06■□□□□ 0.64
ITGA3-204ENST00000505306 EAPPQ56P03 285 aaPredicted RBP19.06■□□□□ 0.64
ITGA3-204ENST00000505306 EYA2O00167 538 aa19.06■□□□□ 0.64
ITGA3-204ENST00000505306 GJB2P29033 226 aa19.06■□□□□ 0.64
ITGA3-204ENST00000505306 CETN1Q12798 172 aa19.06■□□□□ 0.64
ITGA3-204ENST00000505306 CACNA2D4Q7Z3S7 1137 aa19.06■□□□□ 0.64
ITGA3-204ENST00000505306 USP25Q9UHP3 1055 aa19.06■□□□□ 0.64
ITGA3-204ENST00000505306 TBCAO75347 108 aaKnown RBP19.05■□□□□ 0.64
ITGA3-204ENST00000505306 PUM3Q15397 648 aaKnown RBP19.05■□□□□ 0.64
ITGA3-204ENST00000505306 SBNO2Q9Y2G9 1366 aa19.05■□□□□ 0.64
ITGA3-204ENST00000505306 PRKG1Q13976 671 aa19.05■□□□□ 0.64
ITGA3-204ENST00000505306 MAST3O60307 1309 aa19.05■□□□□ 0.64
ITGA3-204ENST00000505306 HDAC1Q13547 482 aaPredicted RBP19.05■□□□□ 0.64
ITGA3-204ENST00000505306 TCERG1LQ5VWI1 586 aa19.05■□□□□ 0.64
ITGA3-204ENST00000505306 FILIP1Q7Z7B0 1213 aa19.05■□□□□ 0.64
ITGA3-204ENST00000505306 ZNF335Q9H4Z2 1342 aaPredicted RBP19.05■□□□□ 0.64
ITGA3-204ENST00000505306 SPDYE3A6NKU9 549 aa19.05■□□□□ 0.64
ITGA3-204ENST00000505306 PPIP5K2O43314 1243 aa19.05■□□□□ 0.64
ITGA3-204ENST00000505306 HOXB7P09629 217 aa19.05■□□□□ 0.64
ITGA3-204ENST00000505306 TCEANC2Q96MN5 208 aa19.05■□□□□ 0.64
ITGA3-204ENST00000505306 SAP30BPQ9UHR5 308 aaKnown RBP19.05■□□□□ 0.64
ITGA3-204ENST00000505306 CFAP74Q9C0B2 1584 aa19.05■□□□□ 0.64
ITGA3-204ENST00000505306 TRIM37O94972 964 aa19.04■□□□□ 0.64
ITGA3-204ENST00000505306 NUCB1Q02818 461 aa19.04■□□□□ 0.64
ITGA3-204ENST00000505306 FAM177A1Q8N128 213 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms