RNA–Protein interactions for RNA: ENST00000505205.1

TRIM23-204, Transcript of tripartite motif containing 23, humanhuman

TSL 3

Gene TRIM23, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-204ENST00000505205 HPS5Q9UPZ3 1129 aa12.11□□□□□ -0.47
TRIM23-204ENST00000505205 COL4A1P02462 1669 aa12.1□□□□□ -0.47
TRIM23-204ENST00000505205 ANXA1P04083 346 aa12.1□□□□□ -0.47
TRIM23-204ENST00000505205 MNX1P50219 401 aaPredicted RBP12.1□□□□□ -0.47
TRIM23-204ENST00000505205 DDX46Q7L014 1031 aaKnown RBP12.1□□□□□ -0.47
TRIM23-204ENST00000505205 SCN9AQ15858 1988 aa12.1□□□□□ -0.47
TRIM23-204ENST00000505205 ASTN2O75129 1339 aaPredicted RBP12.1□□□□□ -0.47
TRIM23-204ENST00000505205 ERBB4Q15303 1308 aa12.1□□□□□ -0.47
TRIM23-204ENST00000505205 RTL9Q8NET4 1388 aa12.09□□□□□ -0.47
TRIM23-204ENST00000505205 RIMBP2O15034 1052 aa12.09□□□□□ -0.47
TRIM23-204ENST00000505205 PPP2R1AP30153 589 aa12.09□□□□□ -0.47
TRIM23-204ENST00000505205 PDIA6Q15084 440 aa12.09□□□□□ -0.47
TRIM23-204ENST00000505205 PROSER3Q2NL68 480 aa12.09□□□□□ -0.47
TRIM23-204ENST00000505205 NLRP10Q86W26 655 aa12.09□□□□□ -0.47
TRIM23-204ENST00000505205 RASAL3Q86YV0 1011 aa12.09□□□□□ -0.47
TRIM23-204ENST00000505205 KCNQ5Q9NR82 932 aa12.09□□□□□ -0.47
TRIM23-204ENST00000505205 GGA3Q9NZ52 723 aa12.09□□□□□ -0.47
TRIM23-204ENST00000505205 RPS12P25398 132 aaKnown RBP12.08□□□□□ -0.48
TRIM23-204ENST00000505205 WASHC4Q2M389 1173 aa12.08□□□□□ -0.48
TRIM23-204ENST00000505205 KIF4BQ2VIQ3 1234 aa12.08□□□□□ -0.48
TRIM23-204ENST00000505205 ZNF428Q96B54 188 aa12.08□□□□□ -0.48
TRIM23-204ENST00000505205 CDCA5Q96FF9 252 aa12.08□□□□□ -0.48
TRIM23-204ENST00000505205 ZBTB47Q9UFB7 747 aaPredicted RBP12.08□□□□□ -0.48
TRIM23-204ENST00000505205 PAPPA2Q9BXP8 1791 aa12.07□□□□□ -0.48
TRIM23-204ENST00000505205 ECE2O60344 883 aa12.07□□□□□ -0.48
TRIM23-204ENST00000505205 EIF2S2P20042 333 aaKnown RBP12.07□□□□□ -0.48
TRIM23-204ENST00000505205 DOK7Q18PE1 504 aa12.07□□□□□ -0.48
TRIM23-204ENST00000505205 TMC4Q7Z404 712 aa12.07□□□□□ -0.48
TRIM23-204ENST00000505205 SULF1Q8IWU6 871 aa12.07□□□□□ -0.48
TRIM23-204ENST00000505205 POLLQ9UGP5 575 aa12.07□□□□□ -0.48
TRIM23-204ENST00000505205 TRMT112Q9UI30 125 aaKnown RBP12.07□□□□□ -0.48
TRIM23-204ENST00000505205 NSFL1CQ9UNZ2 370 aaKnown RBP12.07□□□□□ -0.48
TRIM23-204ENST00000505205 SH3TC1Q8TE82 1336 aa12.07□□□□□ -0.48
TRIM23-204ENST00000505205 MKI67P46013 3256 aaKnown RBP12.06□□□□□ -0.48
TRIM23-204ENST00000505205 C6orf229H3BNL8 230 aa12.06□□□□□ -0.48
TRIM23-204ENST00000505205 ZNF296Q8WUU4 475 aaPredicted RBP12.06□□□□□ -0.48
TRIM23-204ENST00000505205 CELF1Q92879 486 aaKnown RBP12.06□□□□□ -0.48
TRIM23-204ENST00000505205 TBC1D8O95759 1140 aa12.05□□□□□ -0.48
TRIM23-204ENST00000505205 GPSM2P81274 684 aa12.05□□□□□ -0.48
TRIM23-204ENST00000505205 AIMP1Q12904 312 aaKnown RBP12.05□□□□□ -0.48
TRIM23-204ENST00000505205 PKN2Q16513 984 aaKnown RBP12.05□□□□□ -0.48
TRIM23-204ENST00000505205 HSP90AB3PQ58FF7 597 aa12.05□□□□□ -0.48
TRIM23-204ENST00000505205 ANGEL2Q5VTE6 544 aaKnown RBP12.05□□□□□ -0.48
TRIM23-204ENST00000505205 COPS6Q7L5N1 327 aa12.05□□□□□ -0.48
TRIM23-204ENST00000505205 HDAC9Q9UKV0 1011 aa12.05□□□□□ -0.48
TRIM23-204ENST00000505205 HTTP42858 3142 aa12.05□□□□□ -0.48
TRIM23-204ENST00000505205 PSME4Q14997 1843 aa12.04□□□□□ -0.48
TRIM23-204ENST00000505205 TCIRG1Q13488 830 aa12.04□□□□□ -0.48
TRIM23-204ENST00000505205 NFE2L2Q16236 605 aa12.04□□□□□ -0.48
TRIM23-204ENST00000505205 MOB2Q70IA6 237 aa12.04□□□□□ -0.48
TRIM23-204ENST00000505205 XAGE3Q8WTP9 111 aa12.04□□□□□ -0.48
TRIM23-204ENST00000505205 SPOCK2Q92563 424 aa12.04□□□□□ -0.48
TRIM23-204ENST00000505205 NECTIN2Q92692 538 aa12.04□□□□□ -0.48
TRIM23-204ENST00000505205 PLEKHF1Q96S99 279 aa12.04□□□□□ -0.48
TRIM23-204ENST00000505205 TSPYL4Q9UJ04 414 aa12.04□□□□□ -0.48
TRIM23-204ENST00000505205 NEFMP07197 916 aa12.03□□□□□ -0.48
TRIM23-204ENST00000505205 TBC1D16Q8TBP0 767 aa12.03□□□□□ -0.48
TRIM23-204ENST00000505205 GCC1Q96CN9 775 aa12.03□□□□□ -0.48
TRIM23-204ENST00000505205 EYA3Q99504 573 aa12.03□□□□□ -0.48
TRIM23-204ENST00000505205 SCAF8Q9UPN6 1271 aaKnown RBP12.03□□□□□ -0.48
TRIM23-204ENST00000505205 FARP1Q9Y4F1 1045 aaPredicted RBP12.03□□□□□ -0.48
TRIM23-204ENST00000505205 GPR25O00155 361 aa12.02□□□□□ -0.49
TRIM23-204ENST00000505205 VIL1P09327 827 aaKnown RBP12.02□□□□□ -0.49
TRIM23-204ENST00000505205 ZNF280AP59817 542 aaPredicted RBP12.02□□□□□ -0.49
TRIM23-204ENST00000505205 FKBP1BP68106 108 aa12.02□□□□□ -0.49
TRIM23-204ENST00000505205 SCARF1Q14162 830 aa12.02□□□□□ -0.49
TRIM23-204ENST00000505205 FBXO46Q6PJ61 603 aaPredicted RBP12.02□□□□□ -0.49
TRIM23-204ENST00000505205 CCER1Q8TC90 406 aaPredicted RBP12.02□□□□□ -0.49
TRIM23-204ENST00000505205 CENPFP49454 3210 aa12.01□□□□□ -0.49
TRIM23-204ENST00000505205 UBE2Q2LH0YL09 131 aa12.01□□□□□ -0.49
TRIM23-204ENST00000505205 SF3B3Q15393 1217 aaKnown RBP12.01□□□□□ -0.49
TRIM23-204ENST00000505205 HABP4Q5JVS0 413 aaKnown RBP12.01□□□□□ -0.49
TRIM23-204ENST00000505205 FAM89AQ96GI7 184 aa12.01□□□□□ -0.49
TRIM23-204ENST00000505205 ZNF609O15014 1411 aa12.01□□□□□ -0.49
TRIM23-204ENST00000505205 MKRN3Q13064 507 aaKnown RBP12□□□□□ -0.49
TRIM23-204ENST00000505205 PRAMEF18Q5VWM3 479 aa12□□□□□ -0.49
TRIM23-204ENST00000505205 RSBN1LQ6PCB5 846 aaPredicted RBP12□□□□□ -0.49
TRIM23-204ENST00000505205 ZC3H12CQ9C0D7 883 aaKnown RBP12□□□□□ -0.49
TRIM23-204ENST00000505205 BRCA2P51587 3418 aa11.99□□□□□ -0.49
TRIM23-204ENST00000505205 ATP5J2-PTCD1G3V325 749 aa11.99□□□□□ -0.49
TRIM23-204ENST00000505205 UFL1O94874 794 aa11.99□□□□□ -0.49
TRIM23-204ENST00000505205 TM4SF4P48230 202 aa11.99□□□□□ -0.49
TRIM23-204ENST00000505205 NOM1Q5C9Z4 860 aaKnown RBP11.99□□□□□ -0.49
TRIM23-204ENST00000505205 RTL5Q5HYW3 569 aaPredicted RBP11.99□□□□□ -0.49
TRIM23-204ENST00000505205 AGBL3Q8NEM8 1001 aa11.99□□□□□ -0.49
TRIM23-204ENST00000505205 R3HDMLQ9H3Y0 253 aa11.99□□□□□ -0.49
TRIM23-204ENST00000505205 MYOZ2Q9NPC6 264 aa11.99□□□□□ -0.49
TRIM23-204ENST00000505205 PITPNM2Q9BZ72 1349 aa11.99□□□□□ -0.49
TRIM23-204ENST00000505205 MAPK8IP3Q9UPT6 1336 aa11.99□□□□□ -0.49
TRIM23-204ENST00000505205 RBBP6Q7Z6E9 1792 aaKnown RBP11.99□□□□□ -0.49
TRIM23-204ENST00000505205 ZNF646O15015 1829 aaPredicted RBP11.99□□□□□ -0.49
TRIM23-204ENST00000505205 G3V3G9 751 aa11.98□□□□□ -0.49
TRIM23-204ENST00000505205 USP17L8P0C7I0 530 aa11.98□□□□□ -0.49
TRIM23-204ENST00000505205 RPS8P62241 208 aaKnown RBP11.98□□□□□ -0.49
TRIM23-204ENST00000505205 KRT24Q2M2I5 525 aa11.98□□□□□ -0.49
TRIM23-204ENST00000505205 DCAF8Q5TAQ9 597 aa11.98□□□□□ -0.49
TRIM23-204ENST00000505205 GMLQ99445 158 aa11.98□□□□□ -0.49
TRIM23-204ENST00000505205 ISCA1Q9BUE6 129 aa11.98□□□□□ -0.49
TRIM23-204ENST00000505205 PODXL2Q9NZ53 605 aa11.98□□□□□ -0.49
TRIM23-204ENST00000505205 POTEFA5A3E0 1075 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms