RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 TRIP4Q15650 581 aaPredicted RBP5.57□□□□□ -1.52
RFC1-209ENST00000504974 C8orf34Q49A92 452 aa5.57□□□□□ -1.52
RFC1-209ENST00000504974 TRAPPC3LQ5T215 181 aa5.57□□□□□ -1.52
RFC1-209ENST00000504974 SHISA2Q6UWI4 295 aa5.57□□□□□ -1.52
RFC1-209ENST00000504974 DHX32Q7L7V1 743 aaKnown RBP5.57□□□□□ -1.52
RFC1-209ENST00000504974 FAM35AQ86V20 835 aa5.57□□□□□ -1.52
RFC1-209ENST00000504974 DMRTC2Q8IXT2 367 aaPredicted RBP5.57□□□□□ -1.52
RFC1-209ENST00000504974 PIK3R5Q8WYR1 880 aa5.57□□□□□ -1.52
RFC1-209ENST00000504974 NUDT16Q96DE0 195 aaKnown RBP5.57□□□□□ -1.52
RFC1-209ENST00000504974 LILRB5O75023 590 aa5.56□□□□□ -1.52
RFC1-209ENST00000504974 EPB42P16452 691 aa5.56□□□□□ -1.52
RFC1-209ENST00000504974 AFF1P51825 1210 aaKnown RBP5.56□□□□□ -1.52
RFC1-209ENST00000504974 PERM1Q5SV97 790 aa5.56□□□□□ -1.52
RFC1-209ENST00000504974 NSUN5Q96P11 429 aaKnown RBP5.56□□□□□ -1.52
RFC1-209ENST00000504974 FAM13BQ9NYF5 915 aa5.56□□□□□ -1.52
RFC1-209ENST00000504974 NOP53Q9NZM5 478 aaKnown RBP5.56□□□□□ -1.52
RFC1-209ENST00000504974 A6NHS1 94 aa5.55□□□□□ -1.52
RFC1-209ENST00000504974 MMP20O60882 483 aa5.55□□□□□ -1.52
RFC1-209ENST00000504974 ADAM23O75077 832 aa5.55□□□□□ -1.52
RFC1-209ENST00000504974 PDGFAP04085 211 aa5.55□□□□□ -1.52
RFC1-209ENST00000504974 MZF1P28698 734 aaPredicted RBP5.55□□□□□ -1.52
RFC1-209ENST00000504974 GRIK5Q16478 980 aa5.55□□□□□ -1.52
RFC1-209ENST00000504974 ZSCAN29Q8IWY8 852 aaPredicted RBP5.55□□□□□ -1.52
RFC1-209ENST00000504974 LPIN3Q9BQK8 851 aa5.55□□□□□ -1.52
RFC1-209ENST00000504974 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.55□□□□□ -1.52
RFC1-209ENST00000504974 ANKRD33BA6NCL7 494 aa5.54□□□□□ -1.52
RFC1-209ENST00000504974 UBAP1LF5GYI3 381 aa5.54□□□□□ -1.52
RFC1-209ENST00000504974 RGS9O75916 674 aaPredicted RBP5.54□□□□□ -1.52
RFC1-209ENST00000504974 SPATA31C1P0DKV0 1188 aa5.54□□□□□ -1.52
RFC1-209ENST00000504974 ITGB7P26010 798 aa5.54□□□□□ -1.52
RFC1-209ENST00000504974 TRIM28Q13263 835 aaKnown RBP5.54□□□□□ -1.52
RFC1-209ENST00000504974 COL13A1Q5TAT6 717 aaPredicted RBP5.54□□□□□ -1.52
RFC1-209ENST00000504974 TMC7Q7Z402 723 aa5.54□□□□□ -1.52
RFC1-209ENST00000504974 FOXD4L4Q8WXT5 416 aaPredicted RBP5.54□□□□□ -1.52
RFC1-209ENST00000504974 SMG9Q9H0W8 520 aaKnown RBP5.54□□□□□ -1.52
RFC1-209ENST00000504974 A0A0A0MRY4 1105 aa5.53□□□□□ -1.52
RFC1-209ENST00000504974 SELPP16109 830 aa5.53□□□□□ -1.52
RFC1-209ENST00000504974 USP5P45974 858 aa5.53□□□□□ -1.52
RFC1-209ENST00000504974 PDE3BQ13370 1112 aa5.53□□□□□ -1.52
RFC1-209ENST00000504974 PRRT3Q5FWE3 981 aa5.53□□□□□ -1.52
RFC1-209ENST00000504974 ADAMTSL4Q6UY14 1074 aa5.53□□□□□ -1.52
RFC1-209ENST00000504974 TRPM4Q8TD43 1214 aa5.53□□□□□ -1.52
RFC1-209ENST00000504974 PRDM6Q9NQX0 595 aa5.53□□□□□ -1.52
RFC1-209ENST00000504974 PIK3R2O00459 728 aa5.52□□□□□ -1.53
RFC1-209ENST00000504974 MAP3K6O95382 1288 aa5.52□□□□□ -1.53
RFC1-209ENST00000504974 CYP2E1P05181 493 aaPredicted RBP5.52□□□□□ -1.53
RFC1-209ENST00000504974 EIF2AK2P19525 551 aaKnown RBP5.52□□□□□ -1.53
RFC1-209ENST00000504974 ELMSAN1Q6PJG2 1045 aa5.52□□□□□ -1.53
RFC1-209ENST00000504974 DNAJC14Q6Y2X3 702 aaPredicted RBP5.52□□□□□ -1.53
RFC1-209ENST00000504974 ZNF438Q7Z4V0 828 aa5.52□□□□□ -1.53
RFC1-209ENST00000504974 ASB16Q96NS5 453 aa5.52□□□□□ -1.53
RFC1-209ENST00000504974 RBCK1Q9BYM8 510 aa5.52□□□□□ -1.53
RFC1-209ENST00000504974 GGNBP2Q9H3C7 697 aa5.52□□□□□ -1.53
RFC1-209ENST00000504974 TLR7Q9NYK1 1049 aaKnown RBP5.52□□□□□ -1.53
RFC1-209ENST00000504974 FNDC3AQ9Y2H6 1198 aaKnown RBP5.52□□□□□ -1.53
RFC1-209ENST00000504974 K7ELQ4 463 aaPredicted RBP5.51□□□□□ -1.53
RFC1-209ENST00000504974 RPLP1P05386 114 aaKnown RBP5.51□□□□□ -1.53
RFC1-209ENST00000504974 GATA4P43694 442 aa5.51□□□□□ -1.53
RFC1-209ENST00000504974 GDF6Q6KF10 455 aaPredicted RBP5.51□□□□□ -1.53
RFC1-209ENST00000504974 GJD3Q8N144 294 aa5.51□□□□□ -1.53
RFC1-209ENST00000504974 RGS22Q8NE09 1264 aa5.51□□□□□ -1.53
RFC1-209ENST00000504974 CITED4Q96RK1 184 aa5.51□□□□□ -1.53
RFC1-209ENST00000504974 NIF3L1Q9GZT8 377 aa5.51□□□□□ -1.53
RFC1-209ENST00000504974 SEMA6BQ9H3T3 888 aa5.51□□□□□ -1.53
RFC1-209ENST00000504974 TPSG1Q9NRR2 321 aa5.51□□□□□ -1.53
RFC1-209ENST00000504974 LOC102724428A0A0B4J2F2 783 aa5.5□□□□□ -1.53
RFC1-209ENST00000504974 GPR182O15218 404 aa5.5□□□□□ -1.53
RFC1-209ENST00000504974 APBA3O96018 575 aa5.5□□□□□ -1.53
RFC1-209ENST00000504974 EGFRP00533 1210 aa5.5□□□□□ -1.53
RFC1-209ENST00000504974 CDC25BP30305 580 aa5.5□□□□□ -1.53
RFC1-209ENST00000504974 MAPK8P45983 427 aa5.5□□□□□ -1.53
RFC1-209ENST00000504974 SIK1P57059 783 aa5.5□□□□□ -1.53
RFC1-209ENST00000504974 GPLD1P80108 840 aa5.5□□□□□ -1.53
RFC1-209ENST00000504974 ATP11AP98196 1134 aa5.5□□□□□ -1.53
RFC1-209ENST00000504974 EHHADHQ08426 723 aa5.5□□□□□ -1.53
RFC1-209ENST00000504974 MSL1Q68DK7 614 aa5.5□□□□□ -1.53
RFC1-209ENST00000504974 ILDR2Q71H61 639 aa5.5□□□□□ -1.53
RFC1-209ENST00000504974 ALYREFQ86V81 257 aaKnown RBP5.5□□□□□ -1.53
RFC1-209ENST00000504974 PLD4Q96BZ4 506 aa5.5□□□□□ -1.53
RFC1-209ENST00000504974 DMRTB1Q96MA1 342 aa5.5□□□□□ -1.53
RFC1-209ENST00000504974 TRIM33Q9UPN9 1127 aa5.5□□□□□ -1.53
RFC1-209ENST00000504974 DEAF1O75398 565 aaPredicted RBP5.49□□□□□ -1.53
RFC1-209ENST00000504974 PSAPP07602 524 aa5.49□□□□□ -1.53
RFC1-209ENST00000504974 ACPPP15309 386 aa5.49□□□□□ -1.53
RFC1-209ENST00000504974 PLCB3Q01970 1234 aa5.49□□□□□ -1.53
RFC1-209ENST00000504974 NLRP13Q86W25 1043 aa5.49□□□□□ -1.53
RFC1-209ENST00000504974 FMR1NBQ8N0W7 255 aaPredicted RBP5.49□□□□□ -1.53
RFC1-209ENST00000504974 FAM129BQ96TA1 746 aa5.49□□□□□ -1.53
RFC1-209ENST00000504974 BCL2L13Q9BXK5 485 aa5.49□□□□□ -1.53
RFC1-209ENST00000504974 ELP3Q9H9T3 547 aa5.49□□□□□ -1.53
RFC1-209ENST00000504974 TMEM63CQ9P1W3 806 aa5.49□□□□□ -1.53
RFC1-209ENST00000504974 SPDYE3A6NKU9 549 aa5.48□□□□□ -1.53
RFC1-209ENST00000504974 TREHO43280 583 aa5.48□□□□□ -1.53
RFC1-209ENST00000504974 TRPA1O75762 1119 aa5.48□□□□□ -1.53
RFC1-209ENST00000504974 P4HBP07237 508 aaKnown RBP5.48□□□□□ -1.53
RFC1-209ENST00000504974 ERCC3P19447 782 aa5.48□□□□□ -1.53
RFC1-209ENST00000504974 NRLP54845 237 aa5.48□□□□□ -1.53
RFC1-209ENST00000504974 ORC1Q13415 861 aa5.48□□□□□ -1.53
RFC1-209ENST00000504974 RSPO4Q2I0M5 234 aaPredicted RBP5.48□□□□□ -1.53
RFC1-209ENST00000504974 TTC39BQ5VTQ0 682 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms