RNA–Protein interactions for RNA: ENST00000504884.6

SNCAIP-207, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-207ENST00000504884 RIPOR2Q9Y4F9 1068 aa18.45■□□□□ 0.54
SNCAIP-207ENST00000504884 DOT1LQ8TEK3 1739 aa18.45■□□□□ 0.54
SNCAIP-207ENST00000504884 LRRFIP1Q32MZ4 808 aaKnown RBP18.44■□□□□ 0.54
SNCAIP-207ENST00000504884 LDHAL6AQ6ZMR3 332 aa18.44■□□□□ 0.54
SNCAIP-207ENST00000504884 XAGE2Q96GT9 111 aa18.44■□□□□ 0.54
SNCAIP-207ENST00000504884 AK7Q96M32 723 aa18.44■□□□□ 0.54
SNCAIP-207ENST00000504884 SLIT2O94813 1529 aa18.44■□□□□ 0.54
SNCAIP-207ENST00000504884 LOC102724428A0A0B4J2F2 783 aa18.43■□□□□ 0.54
SNCAIP-207ENST00000504884 A0A0G2JS52 829 aa18.43■□□□□ 0.54
SNCAIP-207ENST00000504884 RPS6KB1P23443 525 aa18.43■□□□□ 0.54
SNCAIP-207ENST00000504884 MRE11P49959 708 aa18.43■□□□□ 0.54
SNCAIP-207ENST00000504884 SIK1P57059 783 aa18.43■□□□□ 0.54
SNCAIP-207ENST00000504884 TTC39AQ5SRH9 613 aa18.43■□□□□ 0.54
SNCAIP-207ENST00000504884 FOXD4L5Q5VV16 416 aaPredicted RBP18.43■□□□□ 0.54
SNCAIP-207ENST00000504884 FOXD4L4Q8WXT5 416 aaPredicted RBP18.43■□□□□ 0.54
SNCAIP-207ENST00000504884 SEC62Q99442 399 aaKnown RBP18.43■□□□□ 0.54
SNCAIP-207ENST00000504884 GREM2Q9H772 168 aa18.43■□□□□ 0.54
SNCAIP-207ENST00000504884 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.43■□□□□ 0.54
SNCAIP-207ENST00000504884 ZMYM1Q5SVZ6 1142 aa18.43■□□□□ 0.54
SNCAIP-207ENST00000504884 SMARCC1Q92922 1105 aaPredicted RBP18.43■□□□□ 0.54
SNCAIP-207ENST00000504884 NWD2Q9ULI1 1742 aa18.43■□□□□ 0.54
SNCAIP-207ENST00000504884 RNF113AO15541 343 aaKnown RBP18.42■□□□□ 0.54
SNCAIP-207ENST00000504884 CRKLP46109 303 aaKnown RBP18.42■□□□□ 0.54
SNCAIP-207ENST00000504884 METTL24Q5JXM2 366 aa18.42■□□□□ 0.54
SNCAIP-207ENST00000504884 CCDC129Q6ZRS4 1044 aa18.42■□□□□ 0.54
SNCAIP-207ENST00000504884 ANKRD36CQ5JPF3 1778 aa18.42■□□□□ 0.54
SNCAIP-207ENST00000504884 NUP98P52948 1817 aa18.42■□□□□ 0.54
SNCAIP-207ENST00000504884 XRCC6P12956 609 aaKnown RBP eCLIP18.41■□□□□ 0.54
SNCAIP-207ENST00000504884 PDIA4P13667 645 aaKnown RBP18.41■□□□□ 0.54
SNCAIP-207ENST00000504884 ME3Q16798 604 aa18.41■□□□□ 0.54
SNCAIP-207ENST00000504884 DSCC1Q9BVC3 393 aa18.41■□□□□ 0.54
SNCAIP-207ENST00000504884 BRPF3Q9ULD4 1205 aa18.41■□□□□ 0.54
SNCAIP-207ENST00000504884 SPEF2Q9C093 1822 aa18.41■□□□□ 0.54
SNCAIP-207ENST00000504884 LARGE1O95461 756 aa18.41■□□□□ 0.54
SNCAIP-207ENST00000504884 CHGBP05060 677 aa18.41■□□□□ 0.54
SNCAIP-207ENST00000504884 FKBP4Q02790 459 aaKnown RBP eCLIP18.41■□□□□ 0.54
SNCAIP-207ENST00000504884 CCDC83Q8IWF9 413 aa18.41■□□□□ 0.54
SNCAIP-207ENST00000504884 NEK1Q96PY6 1258 aa18.41■□□□□ 0.54
SNCAIP-207ENST00000504884 CNNM1Q9NRU3 951 aa18.41■□□□□ 0.54
SNCAIP-207ENST00000504884 UBN2Q6ZU65 1347 aa18.41■□□□□ 0.54
SNCAIP-207ENST00000504884 ADORA1P30542 326 aa18.4■□□□□ 0.54
SNCAIP-207ENST00000504884 ATP2B3Q16720 1220 aa18.4■□□□□ 0.54
SNCAIP-207ENST00000504884 TPCN1Q9ULQ1 816 aa18.4■□□□□ 0.54
SNCAIP-207ENST00000504884 ABCC12Q96J65 1359 aa18.4■□□□□ 0.54
SNCAIP-207ENST00000504884 STX6O43752 255 aa18.39■□□□□ 0.54
SNCAIP-207ENST00000504884 ZFYP08048 801 aaPredicted RBP18.39■□□□□ 0.54
SNCAIP-207ENST00000504884 ZSCAN22P10073 491 aaPredicted RBP18.39■□□□□ 0.54
SNCAIP-207ENST00000504884 NCLP19338 710 aaKnown RBP18.39■□□□□ 0.54
SNCAIP-207ENST00000504884 SYT1P21579 422 aa18.39■□□□□ 0.54
SNCAIP-207ENST00000504884 TAF6LQ9Y6J9 622 aa18.39■□□□□ 0.54
SNCAIP-207ENST00000504884 ITPK1Q13572 414 aa18.39■□□□□ 0.53
SNCAIP-207ENST00000504884 PARP10Q53GL7 1025 aa18.39■□□□□ 0.53
SNCAIP-207ENST00000504884 GRPEL1Q9HAV7 217 aa18.39■□□□□ 0.53
SNCAIP-207ENST00000504884 CYP21A2P08686 494 aa18.38■□□□□ 0.53
SNCAIP-207ENST00000504884 HMGB1P09429 215 aaKnown RBP18.38■□□□□ 0.53
SNCAIP-207ENST00000504884 HSP90B1P14625 803 aaKnown RBP18.38■□□□□ 0.53
SNCAIP-207ENST00000504884 GJB2P29033 226 aa18.38■□□□□ 0.53
SNCAIP-207ENST00000504884 ZNF512BQ96KM6 892 aaPredicted RBP18.38■□□□□ 0.53
SNCAIP-207ENST00000504884 UTP14AQ9BVJ6 771 aaKnown RBP18.38■□□□□ 0.53
SNCAIP-207ENST00000504884 ATP6V1DQ9Y5K8 247 aa18.38■□□□□ 0.53
SNCAIP-207ENST00000504884 CAMTA2O94983 1202 aa18.37■□□□□ 0.53
SNCAIP-207ENST00000504884 PDE8BO95263 885 aa18.37■□□□□ 0.53
SNCAIP-207ENST00000504884 MBD3O95983 291 aa18.37■□□□□ 0.53
SNCAIP-207ENST00000504884 TOB2Q14106 344 aaPredicted RBP18.37■□□□□ 0.53
SNCAIP-207ENST00000504884 SUSD4Q5VX71 490 aa18.37■□□□□ 0.53
SNCAIP-207ENST00000504884 MYH3P11055 1940 aa18.37■□□□□ 0.53
SNCAIP-207ENST00000504884 HSPD1P10809 573 aaKnown RBP18.37■□□□□ 0.53
SNCAIP-207ENST00000504884 CAVIN1Q6NZI2 390 aaKnown RBP18.37■□□□□ 0.53
SNCAIP-207ENST00000504884 VGLL2Q8N8G2 317 aa18.37■□□□□ 0.53
SNCAIP-207ENST00000504884 GPT2Q8TD30 523 aa18.37■□□□□ 0.53
SNCAIP-207ENST00000504884 CHAMP1Q96JM3 812 aa18.37■□□□□ 0.53
SNCAIP-207ENST00000504884 RIC1Q4ADV7 1423 aa18.36■□□□□ 0.53
SNCAIP-207ENST00000504884 VPS72Q15906 364 aa18.36■□□□□ 0.53
SNCAIP-207ENST00000504884 GAS2L3Q86XJ1 694 aa18.36■□□□□ 0.53
SNCAIP-207ENST00000504884 NECAB1Q8N987 351 aa18.36■□□□□ 0.53
SNCAIP-207ENST00000504884 NGLY1Q96IV0 654 aa18.36■□□□□ 0.53
SNCAIP-207ENST00000504884 MAST3O60307 1309 aa18.35■□□□□ 0.53
SNCAIP-207ENST00000504884 ZAP70P43403 619 aa18.35■□□□□ 0.53
SNCAIP-207ENST00000504884 ZNF445P59923 1031 aa18.35■□□□□ 0.53
SNCAIP-207ENST00000504884 ST3GAL1Q11201 340 aa18.35■□□□□ 0.53
SNCAIP-207ENST00000504884 COL9A3Q14050 684 aaPredicted RBP18.35■□□□□ 0.53
SNCAIP-207ENST00000504884 SLFNL1Q499Z3 407 aa18.35■□□□□ 0.53
SNCAIP-207ENST00000504884 MROH5Q6ZUA9 1318 aa18.35■□□□□ 0.53
SNCAIP-207ENST00000504884 SCARF1Q14162 830 aa18.35■□□□□ 0.53
SNCAIP-207ENST00000504884 FAM98CQ17RN3 349 aaKnown RBP18.35■□□□□ 0.53
SNCAIP-207ENST00000504884 TCEANC2Q96MN5 208 aa18.35■□□□□ 0.53
SNCAIP-207ENST00000504884 UBAP1LF5GYI3 381 aa18.34■□□□□ 0.53
SNCAIP-207ENST00000504884 KCNQ2O43526 872 aa18.34■□□□□ 0.53
SNCAIP-207ENST00000504884 F13A1P00488 732 aa18.34■□□□□ 0.53
SNCAIP-207ENST00000504884 OSBP2Q969R2 916 aa18.34■□□□□ 0.53
SNCAIP-207ENST00000504884 CICQ96RK0 1608 aaPredicted RBP18.34■□□□□ 0.53
SNCAIP-207ENST00000504884 HCLS1P14317 486 aaPredicted RBP18.33■□□□□ 0.53
SNCAIP-207ENST00000504884 PDCP20941 246 aa18.33■□□□□ 0.53
SNCAIP-207ENST00000504884 TTF1Q15361 905 aaPredicted RBP18.33■□□□□ 0.53
SNCAIP-207ENST00000504884 WASHC4Q2M389 1173 aa18.33■□□□□ 0.53
SNCAIP-207ENST00000504884 ZSCAN23Q3MJ62 389 aa18.33■□□□□ 0.53
SNCAIP-207ENST00000504884 ZSCAN25Q6NSZ9 544 aa18.33■□□□□ 0.53
SNCAIP-207ENST00000504884 DHX32Q7L7V1 743 aaKnown RBP18.33■□□□□ 0.53
SNCAIP-207ENST00000504884 APPBP2Q92624 585 aa18.33■□□□□ 0.53
SNCAIP-207ENST00000504884 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms