RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 NUTM2BA6NNL0 878 aaPredicted RBP11.51□□□□□ -0.57
CSF1R-203ENST00000504875 NUTM2EB1AL46 878 aaPredicted RBP11.51□□□□□ -0.57
CSF1R-203ENST00000504875 HCLS1P14317 486 aaPredicted RBP11.51□□□□□ -0.57
CSF1R-203ENST00000504875 GUCY1B3Q02153 619 aa11.51□□□□□ -0.57
CSF1R-203ENST00000504875 NUTM2AQ8IVF1 878 aaPredicted RBP11.51□□□□□ -0.57
CSF1R-203ENST00000504875 SPATA32Q96LK8 384 aa11.51□□□□□ -0.57
CSF1R-203ENST00000504875 TOMM22Q9NS69 142 aa11.51□□□□□ -0.57
CSF1R-203ENST00000504875 UTYO14607 1347 aa11.51□□□□□ -0.57
CSF1R-203ENST00000504875 ZSCAN30Q86W11 494 aa11.5□□□□□ -0.57
CSF1R-203ENST00000504875 RAB11FIP4Q86YS3 637 aa11.5□□□□□ -0.57
CSF1R-203ENST00000504875 KBTBD3Q8NAB2 608 aa11.5□□□□□ -0.57
CSF1R-203ENST00000504875 SLIT3O75094 1523 aa11.5□□□□□ -0.57
CSF1R-203ENST00000504875 OVOS2A0A0G2JMS6 1433 aa11.5□□□□□ -0.57
CSF1R-203ENST00000504875 VGLL3A8MV65 326 aa11.5□□□□□ -0.57
CSF1R-203ENST00000504875 CDC37L1Q7L3B6 337 aa11.5□□□□□ -0.57
CSF1R-203ENST00000504875 RGPD5Q99666 1765 aa11.5□□□□□ -0.57
CSF1R-203ENST00000504875 MARF1Q9Y4F3 1742 aaKnown RBP11.5□□□□□ -0.57
CSF1R-203ENST00000504875 IDH1O75874 414 aaKnown RBP11.5□□□□□ -0.57
CSF1R-203ENST00000504875 RALYLQ86SE5 291 aaKnown RBP11.5□□□□□ -0.57
CSF1R-203ENST00000504875 DRC7Q8IY82 874 aa11.5□□□□□ -0.57
CSF1R-203ENST00000504875 CARD10Q9BWT7 1032 aa11.5□□□□□ -0.57
CSF1R-203ENST00000504875 USP25Q9UHP3 1055 aa11.5□□□□□ -0.57
CSF1R-203ENST00000504875 MTMR6Q9Y217 621 aa11.5□□□□□ -0.57
CSF1R-203ENST00000504875 EXOC5O00471 708 aa11.49□□□□□ -0.57
CSF1R-203ENST00000504875 JAK2O60674 1132 aa11.49□□□□□ -0.57
CSF1R-203ENST00000504875 AKAP2Q9Y2D5 859 aa11.49□□□□□ -0.57
CSF1R-203ENST00000504875 KIF3AQ9Y496 699 aa11.49□□□□□ -0.57
CSF1R-203ENST00000504875 HAUS7Q99871 368 aa11.49□□□□□ -0.57
CSF1R-203ENST00000504875 H7C1W4 665 aa11.49□□□□□ -0.57
CSF1R-203ENST00000504875 CPLX1O14810 134 aa11.49□□□□□ -0.57
CSF1R-203ENST00000504875 CBX1P83916 185 aa11.49□□□□□ -0.57
CSF1R-203ENST00000504875 APOBRQ0VD83 1088 aa11.49□□□□□ -0.57
CSF1R-203ENST00000504875 STK11IPQ8N1F8 1099 aa11.49□□□□□ -0.57
CSF1R-203ENST00000504875 FBXW7Q969H0 707 aa11.49□□□□□ -0.57
CSF1R-203ENST00000504875 ACSBG1Q96GR2 724 aa11.49□□□□□ -0.57
CSF1R-203ENST00000504875 RFX5P48382 616 aaPredicted RBP11.48□□□□□ -0.57
CSF1R-203ENST00000504875 TCIRG1Q13488 830 aa11.48□□□□□ -0.57
CSF1R-203ENST00000504875 SYNE4Q8N205 404 aa11.48□□□□□ -0.57
CSF1R-203ENST00000504875 HELBQ8NG08 1087 aaPredicted RBP11.48□□□□□ -0.57
CSF1R-203ENST00000504875 KIAA2012Q0VF49 1180 aa11.48□□□□□ -0.57
CSF1R-203ENST00000504875 CKAP2LQ8IYA6 745 aa11.48□□□□□ -0.57
CSF1R-203ENST00000504875 CYP21A2P08686 494 aa11.48□□□□□ -0.57
CSF1R-203ENST00000504875 FOXO4P98177 505 aa11.48□□□□□ -0.57
CSF1R-203ENST00000504875 TRDNQ13061 729 aa11.48□□□□□ -0.57
CSF1R-203ENST00000504875 COL9A3Q14050 684 aaPredicted RBP11.48□□□□□ -0.57
CSF1R-203ENST00000504875 RPAP1Q9BWH6 1393 aaPredicted RBP11.48□□□□□ -0.57
CSF1R-203ENST00000504875 ADORA1P30542 326 aa11.47□□□□□ -0.57
CSF1R-203ENST00000504875 GNL2Q13823 731 aaKnown RBP11.47□□□□□ -0.57
CSF1R-203ENST00000504875 SF3A1Q15459 793 aaKnown RBP11.47□□□□□ -0.57
CSF1R-203ENST00000504875 ZRSR1Q15695 479 aaKnown RBP11.47□□□□□ -0.57
CSF1R-203ENST00000504875 ATP2B3Q16720 1220 aa11.47□□□□□ -0.57
CSF1R-203ENST00000504875 RABL6Q3YEC7 729 aaPredicted RBP11.47□□□□□ -0.57
CSF1R-203ENST00000504875 PIGBQ92521 554 aa11.47□□□□□ -0.57
CSF1R-203ENST00000504875 XAGE2Q96GT9 111 aa11.47□□□□□ -0.57
CSF1R-203ENST00000504875 TEX13AQ9BXU3 409 aaPredicted RBP11.47□□□□□ -0.57
CSF1R-203ENST00000504875 CCDC39Q9UFE4 941 aa11.47□□□□□ -0.57
CSF1R-203ENST00000504875 LMO7Q8WWI1 1683 aa11.47□□□□□ -0.57
CSF1R-203ENST00000504875 MED1Q15648 1581 aaPredicted RBP11.47□□□□□ -0.57
CSF1R-203ENST00000504875 ANKRD18BA2A2Z9 1011 aa11.47□□□□□ -0.57
CSF1R-203ENST00000504875 NPHP1O15259 732 aa11.47□□□□□ -0.57
CSF1R-203ENST00000504875 RNF113AO15541 343 aaKnown RBP11.47□□□□□ -0.57
CSF1R-203ENST00000504875 LETM1O95202 739 aaPredicted RBP11.47□□□□□ -0.57
CSF1R-203ENST00000504875 SMAP1Q8IYB5 467 aaPredicted RBP11.47□□□□□ -0.57
CSF1R-203ENST00000504875 NUP62CLQ9H1M0 184 aa11.47□□□□□ -0.57
CSF1R-203ENST00000504875 TNMDQ9H2S6 317 aa11.47□□□□□ -0.57
CSF1R-203ENST00000504875 KDM3BQ7LBC6 1761 aa11.47□□□□□ -0.57
CSF1R-203ENST00000504875 OFD1O75665 1012 aa11.47□□□□□ -0.57
CSF1R-203ENST00000504875 GTF2E1P29083 439 aaPredicted RBP11.47□□□□□ -0.57
CSF1R-203ENST00000504875 TTLL5Q6EMB2 1281 aa11.47□□□□□ -0.57
CSF1R-203ENST00000504875 IGSF3O75054 1194 aa11.46□□□□□ -0.57
CSF1R-203ENST00000504875 SPC24Q8NBT2 197 aa11.46□□□□□ -0.57
CSF1R-203ENST00000504875 NCOA5Q9HCD5 579 aaKnown RBP11.46□□□□□ -0.57
CSF1R-203ENST00000504875 ADAMTSL3P82987 1691 aa11.46□□□□□ -0.57
CSF1R-203ENST00000504875 IMMTQ16891 758 aaKnown RBP11.46□□□□□ -0.57
CSF1R-203ENST00000504875 PI16Q6UXB8 463 aa11.46□□□□□ -0.57
CSF1R-203ENST00000504875 ZNF142P52746 1687 aaPredicted RBP11.46□□□□□ -0.58
CSF1R-203ENST00000504875 IRS4O14654 1257 aaPredicted RBP11.46□□□□□ -0.58
CSF1R-203ENST00000504875 CCDC192P0DO97 292 aa11.46□□□□□ -0.58
CSF1R-203ENST00000504875 ITGA6P23229 1130 aa11.46□□□□□ -0.58
CSF1R-203ENST00000504875 MPHOSPH8Q99549 860 aa11.46□□□□□ -0.58
CSF1R-203ENST00000504875 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.46□□□□□ -0.58
CSF1R-203ENST00000504875 HMGB1P09429 215 aaKnown RBP11.45□□□□□ -0.58
CSF1R-203ENST00000504875 DHX32Q7L7V1 743 aaKnown RBP11.45□□□□□ -0.58
CSF1R-203ENST00000504875 ATG9AQ7Z3C6 839 aa11.45□□□□□ -0.58
CSF1R-203ENST00000504875 KIF1AQ12756 1690 aa11.45□□□□□ -0.58
CSF1R-203ENST00000504875 ZAP70P43403 619 aa11.45□□□□□ -0.58
CSF1R-203ENST00000504875 TOB2Q14106 344 aaPredicted RBP11.45□□□□□ -0.58
CSF1R-203ENST00000504875 SASS6Q6UVJ0 657 aa11.45□□□□□ -0.58
CSF1R-203ENST00000504875 NFXL1Q6ZNB6 911 aa11.45□□□□□ -0.58
CSF1R-203ENST00000504875 DZIP3Q86Y13 1208 aaKnown RBP11.45□□□□□ -0.58
CSF1R-203ENST00000504875 SCAND2PQ9GZW5 306 aaPredicted RBP11.45□□□□□ -0.58
CSF1R-203ENST00000504875 CTNNA3Q9UI47 895 aa11.45□□□□□ -0.58
CSF1R-203ENST00000504875 MAP3K11Q16584 847 aa11.45□□□□□ -0.58
CSF1R-203ENST00000504875 ZNF830Q96NB3 372 aaPredicted RBP11.45□□□□□ -0.58
CSF1R-203ENST00000504875 PPP1R9BQ96SB3 815 aa11.45□□□□□ -0.58
CSF1R-203ENST00000504875 HELLSQ9NRZ9 838 aa11.45□□□□□ -0.58
CSF1R-203ENST00000504875 HLFQ16534 295 aa11.44□□□□□ -0.58
CSF1R-203ENST00000504875 LRP10Q7Z4F1 713 aa11.44□□□□□ -0.58
CSF1R-203ENST00000504875 DACT1Q9NYF0 836 aa11.44□□□□□ -0.58
CSF1R-203ENST00000504875 ZBTB1Q9Y2K1 713 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms