RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 TRIM33Q9UPN9 1127 aa6.84□□□□□ -1.31
RFC1-208ENST00000504849 FOSL1P15407 271 aa6.83□□□□□ -1.32
RFC1-208ENST00000504849 FLIIQ13045 1269 aa6.83□□□□□ -1.32
RFC1-208ENST00000504849 VSIG10LQ86VR7 867 aa6.83□□□□□ -1.32
RFC1-208ENST00000504849 TPCN2Q8NHX9 752 aa6.83□□□□□ -1.32
RFC1-208ENST00000504849 MFSD14AQ96MC6 490 aa6.83□□□□□ -1.32
RFC1-208ENST00000504849 PRRG2O14669 202 aa6.82□□□□□ -1.32
RFC1-208ENST00000504849 PPP1R12BO60237 982 aaPredicted RBP6.82□□□□□ -1.32
RFC1-208ENST00000504849 LZTS3O60299 673 aaPredicted RBP6.82□□□□□ -1.32
RFC1-208ENST00000504849 BMP3P12645 472 aa6.82□□□□□ -1.32
RFC1-208ENST00000504849 CILP2Q8IUL8 1156 aa6.82□□□□□ -1.32
RFC1-208ENST00000504849 TP53INP2Q8IXH6 220 aa6.82□□□□□ -1.32
RFC1-208ENST00000504849 STAG2Q8N3U4 1231 aa6.82□□□□□ -1.32
RFC1-208ENST00000504849 C1orf115Q9H7X2 142 aa6.82□□□□□ -1.32
RFC1-208ENST00000504849 TLR7Q9NYK1 1049 aaKnown RBP6.82□□□□□ -1.32
RFC1-208ENST00000504849 CCDC9Q9Y3X0 531 aaKnown RBP6.82□□□□□ -1.32
RFC1-208ENST00000504849 LOC102724428A0A0B4J2F2 783 aa6.81□□□□□ -1.32
RFC1-208ENST00000504849 ZBTB7CA1YPR0 619 aa6.81□□□□□ -1.32
RFC1-208ENST00000504849 F13BP05160 661 aa6.81□□□□□ -1.32
RFC1-208ENST00000504849 SKIP12755 728 aa6.81□□□□□ -1.32
RFC1-208ENST00000504849 PDIA4P13667 645 aaKnown RBP6.81□□□□□ -1.32
RFC1-208ENST00000504849 CD68P34810 354 aaPredicted RBP6.81□□□□□ -1.32
RFC1-208ENST00000504849 SIK1P57059 783 aa6.81□□□□□ -1.32
RFC1-208ENST00000504849 SEMA3FQ13275 785 aa6.81□□□□□ -1.32
RFC1-208ENST00000504849 NGLY1Q96IV0 654 aa6.81□□□□□ -1.32
RFC1-208ENST00000504849 ARID3AQ99856 593 aa6.81□□□□□ -1.32
RFC1-208ENST00000504849 M0R2N6 131 aa6.8□□□□□ -1.32
RFC1-208ENST00000504849 EPB42P16452 691 aa6.8□□□□□ -1.32
RFC1-208ENST00000504849 PREPP48147 710 aa6.8□□□□□ -1.32
RFC1-208ENST00000504849 IDH3AP50213 366 aa6.8□□□□□ -1.32
RFC1-208ENST00000504849 SHISA5Q8N114 240 aa6.8□□□□□ -1.32
RFC1-208ENST00000504849 C11orf16Q9NQ32 467 aa6.8□□□□□ -1.32
RFC1-208ENST00000504849 PAK6Q9NQU5 681 aaPredicted RBP6.8□□□□□ -1.32
RFC1-208ENST00000504849 PPME1Q9Y570 386 aa6.8□□□□□ -1.32
RFC1-208ENST00000504849 LINC01387J3KSC0 135 aa6.79□□□□□ -1.32
RFC1-208ENST00000504849 HOXD8P13378 290 aaPredicted RBP6.79□□□□□ -1.32
RFC1-208ENST00000504849 RTN1Q16799 776 aa6.79□□□□□ -1.32
RFC1-208ENST00000504849 KRTAP19-4Q3LI73 84 aa6.79□□□□□ -1.32
RFC1-208ENST00000504849 TSEN2Q8NCE0 465 aaKnown RBP6.79□□□□□ -1.32
RFC1-208ENST00000504849 FOXD4L4Q8WXT5 416 aaPredicted RBP6.79□□□□□ -1.32
RFC1-208ENST00000504849 KCNF1Q9H3M0 494 aa6.79□□□□□ -1.32
RFC1-208ENST00000504849 LEMD3Q9Y2U8 911 aa6.79□□□□□ -1.32
RFC1-208ENST00000504849 ABCC9O60706 1549 aa6.78□□□□□ -1.32
RFC1-208ENST00000504849 ADAM11O75078 769 aa6.78□□□□□ -1.32
RFC1-208ENST00000504849 CLDN10P78369 228 aa6.78□□□□□ -1.32
RFC1-208ENST00000504849 CCDC102BQ68D86 513 aa6.78□□□□□ -1.32
RFC1-208ENST00000504849 LILRA6Q6PI73 481 aa6.78□□□□□ -1.32
RFC1-208ENST00000504849 TXNDC11Q6PKC3 985 aa6.78□□□□□ -1.32
RFC1-208ENST00000504849 DEPDC4Q8N2C3 294 aa6.78□□□□□ -1.32
RFC1-208ENST00000504849 UBASH3BQ8TF42 649 aa6.78□□□□□ -1.32
RFC1-208ENST00000504849 MUC3BQ9H195 1237 aa6.78□□□□□ -1.32
RFC1-208ENST00000504849 SOX11P35716 441 aa6.77□□□□□ -1.33
RFC1-208ENST00000504849 BUD31P41223 144 aaPredicted RBP6.77□□□□□ -1.33
RFC1-208ENST00000504849 ADAMTSL4Q6UY14 1074 aa6.77□□□□□ -1.33
RFC1-208ENST00000504849 NFATC2IPQ8NCF5 419 aa6.77□□□□□ -1.33
RFC1-208ENST00000504849 NSUN5Q96P11 429 aaKnown RBP6.77□□□□□ -1.33
RFC1-208ENST00000504849 DDX3YO15523 660 aaKnown RBP6.76□□□□□ -1.33
RFC1-208ENST00000504849 FARP2O94887 1054 aaPredicted RBP6.76□□□□□ -1.33
RFC1-208ENST00000504849 DKK1O94907 266 aa6.76□□□□□ -1.33
RFC1-208ENST00000504849 ARID4AP29374 1257 aaPredicted RBP6.76□□□□□ -1.33
RFC1-208ENST00000504849 CARD10Q9BWT7 1032 aa6.76□□□□□ -1.33
RFC1-208ENST00000504849 ATAD2Q6PL18 1390 aa6.76□□□□□ -1.33
RFC1-208ENST00000504849 USP17L5A8MUK1 530 aa6.75□□□□□ -1.33
RFC1-208ENST00000504849 EGFRP00533 1210 aa6.75□□□□□ -1.33
RFC1-208ENST00000504849 GHRHP01286 108 aa6.75□□□□□ -1.33
RFC1-208ENST00000504849 ARSDP51689 593 aa6.75□□□□□ -1.33
RFC1-208ENST00000504849 CPSF6Q16630 551 aaKnown RBP eCLIP6.75□□□□□ -1.33
RFC1-208ENST00000504849 DUOXA2Q1HG44 320 aa6.75□□□□□ -1.33
RFC1-208ENST00000504849 CACTIN-AS1Q8N1I8 211 aa6.75□□□□□ -1.33
RFC1-208ENST00000504849 ATG3Q9NT62 314 aa6.75□□□□□ -1.33
RFC1-208ENST00000504849 BSDC1Q9NW68 430 aaPredicted RBP6.75□□□□□ -1.33
RFC1-208ENST00000504849 HIF3AQ9Y2N7 669 aa6.75□□□□□ -1.33
RFC1-208ENST00000504849 A6NJR5 290 aa6.74□□□□□ -1.33
RFC1-208ENST00000504849 B8ZZF3 427 aa6.74□□□□□ -1.33
RFC1-208ENST00000504849 MMP20O60882 483 aa6.74□□□□□ -1.33
RFC1-208ENST00000504849 WASHC4Q2M389 1173 aa6.74□□□□□ -1.33
RFC1-208ENST00000504849 WFDC3Q8IUB2 231 aa6.74□□□□□ -1.33
RFC1-208ENST00000504849 AGBL5Q8NDL9 886 aa6.74□□□□□ -1.33
RFC1-208ENST00000504849 FLCNQ8NFG4 579 aa6.74□□□□□ -1.33
RFC1-208ENST00000504849 GDPD2Q9HCC8 539 aa6.74□□□□□ -1.33
RFC1-208ENST00000504849 KLK14Q9P0G3 267 aa6.74□□□□□ -1.33
RFC1-208ENST00000504849 ARID3CA6NKF2 412 aa6.73□□□□□ -1.33
RFC1-208ENST00000504849 SOX18P35713 384 aa6.73□□□□□ -1.33
RFC1-208ENST00000504849 FBXL6Q8N531 539 aa6.73□□□□□ -1.33
RFC1-208ENST00000504849 OSBPL1AQ9BXW6 950 aa6.73□□□□□ -1.33
RFC1-208ENST00000504849 USP20Q9Y2K6 914 aa6.73□□□□□ -1.33
RFC1-208ENST00000504849 FSCN2O14926 492 aa6.72□□□□□ -1.33
RFC1-208ENST00000504849 PKN1Q16512 942 aa6.72□□□□□ -1.33
RFC1-208ENST00000504849 ANKRD34AQ69YU3 496 aa6.72□□□□□ -1.33
RFC1-208ENST00000504849 TRIM50Q86XT4 487 aa6.72□□□□□ -1.33
RFC1-208ENST00000504849 SCG3Q8WXD2 468 aaKnown RBP6.72□□□□□ -1.33
RFC1-208ENST00000504849 PRM3Q9NNZ6 103 aa6.72□□□□□ -1.33
RFC1-208ENST00000504849 JAG2Q9Y219 1238 aa6.72□□□□□ -1.33
RFC1-208ENST00000504849 OPLAHO14841 1288 aa6.71□□□□□ -1.34
RFC1-208ENST00000504849 PSAPP07602 524 aa6.71□□□□□ -1.34
RFC1-208ENST00000504849 MAP4P27816 1152 aaKnown RBP6.71□□□□□ -1.34
RFC1-208ENST00000504849 ABL2P42684 1182 aa6.71□□□□□ -1.34
RFC1-208ENST00000504849 SGO2Q562F6 1265 aa6.71□□□□□ -1.34
RFC1-208ENST00000504849 C1QL4Q86Z23 238 aa6.71□□□□□ -1.34
RFC1-208ENST00000504849 SART1O43290 800 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms