RNA–Protein interactions for RNA: ENST00000504517.5

SH3TC2-205, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 2

Gene SH3TC2, Length 4,153 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-205ENST00000504517 IQSEC3Q9UPP2 1182 aaPredicted RBP12.02□□□□□ -0.49
SH3TC2-205ENST00000504517 KDM6AO15550 1401 aaPredicted RBP12.01□□□□□ -0.49
SH3TC2-205ENST00000504517 MTX1Q13505 466 aa12.01□□□□□ -0.49
SH3TC2-205ENST00000504517 MCMDC2Q4G0Z9 681 aa12.01□□□□□ -0.49
SH3TC2-205ENST00000504517 ZSCAN31Q96LW9 406 aaPredicted RBP12.01□□□□□ -0.49
SH3TC2-205ENST00000504517 FAM227BQ96M60 508 aa12.01□□□□□ -0.49
SH3TC2-205ENST00000504517 ERICH2A1L162 156 aa12.01□□□□□ -0.49
SH3TC2-205ENST00000504517 IMMTQ16891 758 aaKnown RBP12.01□□□□□ -0.49
SH3TC2-205ENST00000504517 CCDC83Q8IWF9 413 aa12.01□□□□□ -0.49
SH3TC2-205ENST00000504517 TSC1Q92574 1164 aa12.01□□□□□ -0.49
SH3TC2-205ENST00000504517 QTRT2Q9H974 415 aaKnown RBP12.01□□□□□ -0.49
SH3TC2-205ENST00000504517 LIMCH1Q9UPQ0 1083 aa12.01□□□□□ -0.49
SH3TC2-205ENST00000504517 H7C1W4 665 aa12.01□□□□□ -0.49
SH3TC2-205ENST00000504517 SASH1O94885 1247 aa12.01□□□□□ -0.49
SH3TC2-205ENST00000504517 HMGB2P26583 209 aaKnown RBP12.01□□□□□ -0.49
SH3TC2-205ENST00000504517 PTPN12Q05209 780 aaKnown RBP12.01□□□□□ -0.49
SH3TC2-205ENST00000504517 TRAPPC3LQ5T215 181 aa12.01□□□□□ -0.49
SH3TC2-205ENST00000504517 TLR7Q9NYK1 1049 aaKnown RBP12.01□□□□□ -0.49
SH3TC2-205ENST00000504517 TRPC5Q9UL62 973 aaPredicted RBP12.01□□□□□ -0.49
SH3TC2-205ENST00000504517 KCNQ2O43526 872 aa12□□□□□ -0.49
SH3TC2-205ENST00000504517 UQCRFS1P1P0C7P4 283 aa12□□□□□ -0.49
SH3TC2-205ENST00000504517 SF3B2Q13435 895 aaKnown RBP12□□□□□ -0.49
SH3TC2-205ENST00000504517 HLFQ16534 295 aa12□□□□□ -0.49
SH3TC2-205ENST00000504517 CERS3Q8IU89 383 aa12□□□□□ -0.49
SH3TC2-205ENST00000504517 AMOTL1Q8IY63 956 aa12□□□□□ -0.49
SH3TC2-205ENST00000504517 TMX3Q96JJ7 454 aa12□□□□□ -0.49
SH3TC2-205ENST00000504517 SPATA31A1Q5TZJ5 1347 aa12□□□□□ -0.49
SH3TC2-205ENST00000504517 TOPAZ1Q8N9V7 1692 aa12□□□□□ -0.49
SH3TC2-205ENST00000504517 ATP10DQ9P241 1426 aa12□□□□□ -0.49
SH3TC2-205ENST00000504517 TDO2P48775 406 aa12□□□□□ -0.49
SH3TC2-205ENST00000504517 CTSWP56202 376 aa12□□□□□ -0.49
SH3TC2-205ENST00000504517 TTF1Q15361 905 aaPredicted RBP12□□□□□ -0.49
SH3TC2-205ENST00000504517 CCDC24Q8N4L8 307 aa12□□□□□ -0.49
SH3TC2-205ENST00000504517 RPGRQ92834 1020 aaKnown RBP12□□□□□ -0.49
SH3TC2-205ENST00000504517 TNPO1Q92973 898 aaKnown RBP12□□□□□ -0.49
SH3TC2-205ENST00000504517 TCEANC2Q96MN5 208 aa12□□□□□ -0.49
SH3TC2-205ENST00000504517 PUS3Q9BZE2 481 aaKnown RBP12□□□□□ -0.49
SH3TC2-205ENST00000504517 GTPBP4Q9BZE4 634 aaKnown RBP12□□□□□ -0.49
SH3TC2-205ENST00000504517 CYP19A1P11511 503 aaPredicted RBP12□□□□□ -0.49
SH3TC2-205ENST00000504517 NLRP10Q86W26 655 aa12□□□□□ -0.49
SH3TC2-205ENST00000504517 XAGE2Q96GT9 111 aa12□□□□□ -0.49
SH3TC2-205ENST00000504517 NYXQ9GZU5 481 aa12□□□□□ -0.49
SH3TC2-205ENST00000504517 COL5A2P05997 1499 aaPredicted RBP12□□□□□ -0.49
SH3TC2-205ENST00000504517 PDCP20941 246 aa12□□□□□ -0.49
SH3TC2-205ENST00000504517 ATP5JP18859 108 aa11.99□□□□□ -0.49
SH3TC2-205ENST00000504517 PALLDQ8WX93 1383 aa11.99□□□□□ -0.49
SH3TC2-205ENST00000504517 JCADQ9P266 1359 aa11.99□□□□□ -0.49
SH3TC2-205ENST00000504517 SSFA2P28290 1259 aa11.99□□□□□ -0.49
SH3TC2-205ENST00000504517 HAND2P61296 217 aa11.99□□□□□ -0.49
SH3TC2-205ENST00000504517 SLC9C2Q5TAH2 1124 aa11.99□□□□□ -0.49
SH3TC2-205ENST00000504517 DBNLQ9UJU6 430 aaKnown RBP11.99□□□□□ -0.49
SH3TC2-205ENST00000504517 MARCH10Q8NA82 808 aaPredicted RBP11.99□□□□□ -0.49
SH3TC2-205ENST00000504517 GREM2Q9H772 168 aa11.99□□□□□ -0.49
SH3TC2-205ENST00000504517 CCDC171Q6TFL3 1326 aa11.98□□□□□ -0.49
SH3TC2-205ENST00000504517 WDR33Q9C0J8 1336 aaKnown RBP11.98□□□□□ -0.49
SH3TC2-205ENST00000504517 ZFYP08048 801 aaPredicted RBP11.98□□□□□ -0.49
SH3TC2-205ENST00000504517 AKAP17AQ02040 695 aaKnown RBP11.98□□□□□ -0.49
SH3TC2-205ENST00000504517 SF3A1Q15459 793 aaKnown RBP11.98□□□□□ -0.49
SH3TC2-205ENST00000504517 LARP1BQ659C4 914 aaKnown RBP11.98□□□□□ -0.49
SH3TC2-205ENST00000504517 CERKQ8TCT0 537 aa11.98□□□□□ -0.49
SH3TC2-205ENST00000504517 KIF20AO95235 890 aa11.98□□□□□ -0.49
SH3TC2-205ENST00000504517 HMG20BQ9P0W2 317 aa11.98□□□□□ -0.49
SH3TC2-205ENST00000504517 TAF5LO75529 589 aa11.98□□□□□ -0.49
SH3TC2-205ENST00000504517 SART3Q15020 963 aaKnown RBP11.98□□□□□ -0.49
SH3TC2-205ENST00000504517 GOLGA6L1Q8N7Z2 621 aa11.98□□□□□ -0.49
SH3TC2-205ENST00000504517 SPC24Q8NBT2 197 aa11.98□□□□□ -0.49
SH3TC2-205ENST00000504517 PATL2C9JE40 543 aaKnown RBP11.97□□□□□ -0.49
SH3TC2-205ENST00000504517 ZNF213O14771 459 aa11.97□□□□□ -0.49
SH3TC2-205ENST00000504517 RNF113AO15541 343 aaKnown RBP11.97□□□□□ -0.49
SH3TC2-205ENST00000504517 CREB3L3Q68CJ9 461 aa11.97□□□□□ -0.49
SH3TC2-205ENST00000504517 SYNE4Q8N205 404 aa11.97□□□□□ -0.49
SH3TC2-205ENST00000504517 NEK1Q96PY6 1258 aa11.97□□□□□ -0.49
SH3TC2-205ENST00000504517 NAPBQ9H115 298 aa11.97□□□□□ -0.49
SH3TC2-205ENST00000504517 TFCP2L1Q9NZI6 479 aa11.97□□□□□ -0.49
SH3TC2-205ENST00000504517 SLIT3O75094 1523 aa11.97□□□□□ -0.49
SH3TC2-205ENST00000504517 ERVV-1B6SEH8 477 aa11.97□□□□□ -0.49
SH3TC2-205ENST00000504517 KDM4AO75164 1064 aa11.97□□□□□ -0.49
SH3TC2-205ENST00000504517 CCDC129Q6ZRS4 1044 aa11.97□□□□□ -0.49
SH3TC2-205ENST00000504517 KBTBD3Q8NAB2 608 aa11.97□□□□□ -0.49
SH3TC2-205ENST00000504517 IPO4Q8TEX9 1081 aaKnown RBP11.97□□□□□ -0.49
SH3TC2-205ENST00000504517 CPA1P15085 419 aa11.97□□□□□ -0.49
SH3TC2-205ENST00000504517 SH2B1Q9NRF2 756 aaPredicted RBP11.97□□□□□ -0.49
SH3TC2-205ENST00000504517 RGS12O14924 1447 aa11.97□□□□□ -0.49
SH3TC2-205ENST00000504517 AFF2P51816 1311 aa11.97□□□□□ -0.49
SH3TC2-205ENST00000504517 RAD50Q92878 1312 aa11.97□□□□□ -0.49
SH3TC2-205ENST00000504517 SYCE3A1L190 88 aa11.97□□□□□ -0.49
SH3TC2-205ENST00000504517 TRIM29Q14134 588 aa11.97□□□□□ -0.49
SH3TC2-205ENST00000504517 TEX35Q5T0J7 233 aa11.97□□□□□ -0.49
SH3TC2-205ENST00000504517 SEPT12Q8IYM1 358 aa11.97□□□□□ -0.49
SH3TC2-205ENST00000504517 PI4K2BQ8TCG2 481 aa11.97□□□□□ -0.49
SH3TC2-205ENST00000504517 PUM3Q15397 648 aaKnown RBP11.96□□□□□ -0.49
SH3TC2-205ENST00000504517 SPATA31A5Q5VU36 1347 aa11.96□□□□□ -0.49
SH3TC2-205ENST00000504517 SPATA31A7Q8IWB4 1347 aa11.96□□□□□ -0.49
SH3TC2-205ENST00000504517 CAMTA1Q9Y6Y1 1673 aa11.96□□□□□ -0.49
SH3TC2-205ENST00000504517 HMGB1P09429 215 aaKnown RBP11.96□□□□□ -0.5
SH3TC2-205ENST00000504517 USPL1Q5W0Q7 1092 aa11.96□□□□□ -0.5
SH3TC2-205ENST00000504517 DDX11Q96FC9 970 aa11.96□□□□□ -0.5
SH3TC2-205ENST00000504517 ZNF830Q96NB3 372 aaPredicted RBP11.96□□□□□ -0.5
SH3TC2-205ENST00000504517 TRIM34Q9BYJ4 488 aa11.96□□□□□ -0.5
SH3TC2-205ENST00000504517 FIBPO43427 364 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms