RNA–Protein interactions for RNA: ENST00000504335.1

SMTN-221, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-221ENST00000504335 SYTL4Q96C24 671 aaPredicted RBP15.66■□□□□ 0.1
SMTN-221ENST00000504335 DCTPP1Q9H773 170 aa15.66■□□□□ 0.1
SMTN-221ENST00000504335 RAB21Q9UL25 225 aa15.66■□□□□ 0.1
SMTN-221ENST00000504335 RPGRIP1LQ68CZ1 1315 aa15.66■□□□□ 0.1
SMTN-221ENST00000504335 BECN2A8MW95 431 aa15.65■□□□□ 0.1
SMTN-221ENST00000504335 TUBBP07437 444 aa15.65■□□□□ 0.1
SMTN-221ENST00000504335 ABCD1P33897 745 aa15.65■□□□□ 0.1
SMTN-221ENST00000504335 KRT85P78386 507 aa15.65■□□□□ 0.1
SMTN-221ENST00000504335 CCDC50Q8IVM0 306 aa15.65■□□□□ 0.1
SMTN-221ENST00000504335 TSR2Q969E8 191 aaKnown RBP15.65■□□□□ 0.1
SMTN-221ENST00000504335 SMC3Q9UQE7 1217 aa15.65■□□□□ 0.1
SMTN-221ENST00000504335 MRFAP1Q9Y605 127 aa15.65■□□□□ 0.1
SMTN-221ENST00000504335 SHTN1A0MZ66 631 aa15.65■□□□□ 0.1
SMTN-221ENST00000504335 GOLGA6L4A6NEF3 574 aa15.65■□□□□ 0.1
SMTN-221ENST00000504335 ECM2O94769 699 aaPredicted RBP15.65■□□□□ 0.1
SMTN-221ENST00000504335 MAGEC3Q8TD91 643 aa15.65■□□□□ 0.1
SMTN-221ENST00000504335 CLIC6Q96NY7 704 aa15.65■□□□□ 0.1
SMTN-221ENST00000504335 PBRM1Q86U86 1689 aa15.65■□□□□ 0.1
SMTN-221ENST00000504335 PIK3R4Q99570 1358 aa15.65■□□□□ 0.1
SMTN-221ENST00000504335 CHGAP10645 457 aaKnown RBP15.64■□□□□ 0.1
SMTN-221ENST00000504335 MAB21L3Q8N8X9 362 aa15.64■□□□□ 0.1
SMTN-221ENST00000504335 PARD3BQ8TEW8 1205 aa15.64■□□□□ 0.1
SMTN-221ENST00000504335 STK31Q9BXU1 1019 aa15.64■□□□□ 0.1
SMTN-221ENST00000504335 EPB41L2O43491 1005 aaKnown RBP15.64■□□□□ 0.09
SMTN-221ENST00000504335 FILIP1LQ4L180 1135 aa15.64■□□□□ 0.09
SMTN-221ENST00000504335 CEP85LQ5SZL2 805 aa15.64■□□□□ 0.09
SMTN-221ENST00000504335 CDCA2Q69YH5 1023 aaPredicted RBP15.64■□□□□ 0.09
SMTN-221ENST00000504335 NFXL1Q6ZNB6 911 aa15.64■□□□□ 0.09
SMTN-221ENST00000504335 KDM4CQ9H3R0 1056 aa15.64■□□□□ 0.09
SMTN-221ENST00000504335 ATP6V0A4Q9HBG4 840 aa15.64■□□□□ 0.09
SMTN-221ENST00000504335 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.64■□□□□ 0.092e-6■■■■■ 149.1
SMTN-221ENST00000504335 NPHP3Q7Z494 1330 aa15.64■□□□□ 0.09
SMTN-221ENST00000504335 SSH2Q76I76 1423 aa15.64■□□□□ 0.09
SMTN-221ENST00000504335 KIAA0754O94854 1291 aa15.64■□□□□ 0.09
SMTN-221ENST00000504335 RAB27AP51159 221 aa15.64■□□□□ 0.09
SMTN-221ENST00000504335 KLC4Q9NSK0 619 aa15.64■□□□□ 0.09
SMTN-221ENST00000504335 TBC1D2BQ9UPU7 963 aa15.64■□□□□ 0.09
SMTN-221ENST00000504335 IL16Q14005 1332 aa15.63■□□□□ 0.09
SMTN-221ENST00000504335 ZSCAN12O43309 604 aa15.63■□□□□ 0.09
SMTN-221ENST00000504335 ARHGAP25P42331 645 aa15.63■□□□□ 0.09
SMTN-221ENST00000504335 NAA25Q14CX7 972 aa15.63■□□□□ 0.09
SMTN-221ENST00000504335 B4GALNT4Q76KP1 1039 aa15.63■□□□□ 0.09
SMTN-221ENST00000504335 FCHSD1Q86WN1 690 aa15.63■□□□□ 0.09
SMTN-221ENST00000504335 NAT10Q9H0A0 1025 aaKnown RBP15.63■□□□□ 0.09
SMTN-221ENST00000504335 FAM135BQ49AJ0 1406 aa15.63■□□□□ 0.09
SMTN-221ENST00000504335 GOLGA6L9A6NEM1 432 aa15.63■□□□□ 0.09
SMTN-221ENST00000504335 CDKL5O76039 1030 aa15.63■□□□□ 0.09
SMTN-221ENST00000504335 PDIA5Q14554 519 aa15.63■□□□□ 0.09
SMTN-221ENST00000504335 CASP8Q14790 479 aa15.63■□□□□ 0.09
SMTN-221ENST00000504335 TSHZ1Q6ZSZ6 1077 aa15.63■□□□□ 0.09
SMTN-221ENST00000504335 ARHGAP45Q92619 1136 aa15.63■□□□□ 0.09
SMTN-221ENST00000504335 C1orf115Q9H7X2 142 aa15.63■□□□□ 0.09
SMTN-221ENST00000504335 ZNF644Q9H582 1327 aaPredicted RBP15.62■□□□□ 0.09
SMTN-221ENST00000504335 A2MP01023 1474 aa15.62■□□□□ 0.09
SMTN-221ENST00000504335 IMPDH2P12268 514 aa15.62■□□□□ 0.09
SMTN-221ENST00000504335 SMTNP53814 917 aa15.62■□□□□ 0.09
SMTN-221ENST00000504335 TLDC1Q6P9B6 456 aa15.62■□□□□ 0.09
SMTN-221ENST00000504335 TTC6Q86TZ1 520 aa15.62■□□□□ 0.09
SMTN-221ENST00000504335 MSANTD4Q8NCY6 345 aa15.62■□□□□ 0.09
SMTN-221ENST00000504335 VIPAS39Q9H9C1 493 aa15.62■□□□□ 0.09
SMTN-221ENST00000504335 MYO1FO00160 1098 aa15.62■□□□□ 0.09
SMTN-221ENST00000504335 RNF40O75150 1001 aa15.62■□□□□ 0.09
SMTN-221ENST00000504335 FAM163BP0C2L3 166 aa15.62■□□□□ 0.09
SMTN-221ENST00000504335 PLCB4Q15147 1175 aa15.62■□□□□ 0.09
SMTN-221ENST00000504335 STX1AQ16623 288 aa15.62■□□□□ 0.09
SMTN-221ENST00000504335 MTMR6Q9Y217 621 aa15.62■□□□□ 0.09
SMTN-221ENST00000504335 PHACTR2O75167 634 aa15.61■□□□□ 0.09
SMTN-221ENST00000504335 AARSP49588 968 aaKnown RBP eCLIP15.61■□□□□ 0.09
SMTN-221ENST00000504335 SF3A1Q15459 793 aaKnown RBP15.61■□□□□ 0.09
SMTN-221ENST00000504335 SMARCC1Q92922 1105 aaPredicted RBP15.61■□□□□ 0.09
SMTN-221ENST00000504335 ZBTB10Q96DT7 871 aa15.61■□□□□ 0.09
SMTN-221ENST00000504335 SCAND2PQ9GZW5 306 aaPredicted RBP15.61■□□□□ 0.09
SMTN-221ENST00000504335 RNF17Q9BXT8 1623 aaKnown RBP15.61■□□□□ 0.09
SMTN-221ENST00000504335 MYOM1P52179 1685 aa15.61■□□□□ 0.09
SMTN-221ENST00000504335 CD151P48509 253 aa15.61■□□□□ 0.09
SMTN-221ENST00000504335 CDR1P51861 262 aa15.61■□□□□ 0.09
SMTN-221ENST00000504335 KIF4BQ2VIQ3 1234 aa15.61■□□□□ 0.09
SMTN-221ENST00000504335 ARMCX5Q6P1M9 558 aa15.61■□□□□ 0.09
SMTN-221ENST00000504335 SPDL1Q96EA4 605 aa15.61■□□□□ 0.09
SMTN-221ENST00000504335 PALD1Q9ULE6 856 aa15.61■□□□□ 0.09
SMTN-221ENST00000504335 CHMP3Q9Y3E7 222 aa15.61■□□□□ 0.09
SMTN-221ENST00000504335 NAP1L1P55209 391 aaKnown RBP15.6■□□□□ 0.09
SMTN-221ENST00000504335 NCAPG2Q86XI2 1143 aa15.6■□□□□ 0.09
SMTN-221ENST00000504335 C3orf20Q8ND61 904 aa15.6■□□□□ 0.09
SMTN-221ENST00000504335 ARMCX6Q7L4S7 300 aa15.6■□□□□ 0.09
SMTN-221ENST00000504335 CCDC97Q96F63 343 aaPredicted RBP15.6■□□□□ 0.09
SMTN-221ENST00000504335 RSRC1Q96IZ7 334 aaKnown RBP15.6■□□□□ 0.09
SMTN-221ENST00000504335 ESYT1Q9BSJ8 1104 aa15.6■□□□□ 0.09
SMTN-221ENST00000504335 PCDHGA4Q9Y5G9 962 aa15.6■□□□□ 0.09
SMTN-221ENST00000504335 RTN3O95197 1032 aaPredicted RBP15.59■□□□□ 0.09
SMTN-221ENST00000504335 SKIDA1Q1XH10 827 aa15.59■□□□□ 0.09
SMTN-221ENST00000504335 RBM12BQ8IXT5 1001 aaKnown RBP15.59■□□□□ 0.09
SMTN-221ENST00000504335 UPF3BQ9BZI7 483 aaKnown RBP15.59■□□□□ 0.09
SMTN-221ENST00000504335 ABCB6Q9NP58 842 aa15.59■□□□□ 0.09
SMTN-221ENST00000504335 DDX20Q9UHI6 824 aaKnown RBP15.59■□□□□ 0.09
SMTN-221ENST00000504335 GBP2P32456 591 aaPredicted RBP15.59■□□□□ 0.09
SMTN-221ENST00000504335 ATP2B2Q01814 1243 aa15.59■□□□□ 0.09
SMTN-221ENST00000504335 C16orf71Q8IYS4 520 aaPredicted RBP15.59■□□□□ 0.09
SMTN-221ENST00000504335 SPDYE1Q8NFV5 336 aaPredicted RBP15.59■□□□□ 0.09
SMTN-221ENST00000504335 MMTAG2Q9BU76 263 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms