RNA–Protein interactions for RNA: ENST00000504136.1

SSBP2-202, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 927 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-202ENST00000504136 CACNA1SQ13698 1873 aa11.59□□□□□ -0.55
SSBP2-202ENST00000504136 LTBP3Q9NS15 1303 aa11.59□□□□□ -0.55
SSBP2-202ENST00000504136 ST5P78524 1137 aa11.58□□□□□ -0.56
SSBP2-202ENST00000504136 GIGYF2Q6Y7W6 1299 aaKnown RBP11.58□□□□□ -0.56
SSBP2-202ENST00000504136 TTLL7Q6ZT98 887 aa11.58□□□□□ -0.56
SSBP2-202ENST00000504136 NIP7Q9Y221 180 aaKnown RBP eCLIP11.58□□□□□ -0.56
SSBP2-202ENST00000504136 RRP7AQ9Y3A4 280 aaKnown RBP11.58□□□□□ -0.56
SSBP2-202ENST00000504136 SNED1Q8TER0 1413 aa11.58□□□□□ -0.56
SSBP2-202ENST00000504136 CCDC88AQ3V6T2 1871 aa11.57□□□□□ -0.56
SSBP2-202ENST00000504136 NFKBIEO00221 500 aa11.57□□□□□ -0.56
SSBP2-202ENST00000504136 PRELPP51888 382 aa11.57□□□□□ -0.56
SSBP2-202ENST00000504136 FAM161AQ3B820 660 aa11.57□□□□□ -0.56
SSBP2-202ENST00000504136 CRY2Q49AN0 593 aa11.57□□□□□ -0.56
SSBP2-202ENST00000504136 C9orf131Q5VYM1 1079 aa11.57□□□□□ -0.56
SSBP2-202ENST00000504136 TPTE2Q6XPS3 522 aa11.57□□□□□ -0.56
SSBP2-202ENST00000504136 NBPF5PQ86XG9 351 aaPredicted RBP11.57□□□□□ -0.56
SSBP2-202ENST00000504136 ZNF34Q8IZ26 560 aa11.57□□□□□ -0.56
SSBP2-202ENST00000504136 ZC3H15Q8WU90 426 aaKnown RBP11.57□□□□□ -0.56
SSBP2-202ENST00000504136 GPBP1L1Q9HC44 474 aaPredicted RBP11.57□□□□□ -0.56
SSBP2-202ENST00000504136 UBN2Q6ZU65 1347 aa11.57□□□□□ -0.56
SSBP2-202ENST00000504136 KIF6Q6ZMV9 814 aa11.56□□□□□ -0.56
SSBP2-202ENST00000504136 C7orf43Q8WVR3 580 aa11.56□□□□□ -0.56
SSBP2-202ENST00000504136 CNKSR1Q969H4 720 aa11.56□□□□□ -0.56
SSBP2-202ENST00000504136 KCTD12Q96CX2 325 aaKnown RBP11.56□□□□□ -0.56
SSBP2-202ENST00000504136 MASTLQ96GX5 879 aa11.56□□□□□ -0.56
SSBP2-202ENST00000504136 DDX21Q9NR30 783 aaKnown RBP eCLIP11.56□□□□□ -0.56
SSBP2-202ENST00000504136 RNF123Q5XPI4 1314 aa11.56□□□□□ -0.56
SSBP2-202ENST00000504136 ABCC12Q96J65 1359 aa11.55□□□□□ -0.56
SSBP2-202ENST00000504136 NPR1P16066 1061 aa11.55□□□□□ -0.56
SSBP2-202ENST00000504136 LMNB1P20700 586 aa11.55□□□□□ -0.56
SSBP2-202ENST00000504136 CCDC27Q2M243 656 aa11.55□□□□□ -0.56
SSBP2-202ENST00000504136 PROSER3Q2NL68 480 aa11.55□□□□□ -0.56
SSBP2-202ENST00000504136 CCDC184Q52MB2 194 aa11.55□□□□□ -0.56
SSBP2-202ENST00000504136 WNT2BQ93097 391 aa11.55□□□□□ -0.56
SSBP2-202ENST00000504136 NYXQ9GZU5 481 aa11.55□□□□□ -0.56
SSBP2-202ENST00000504136 IFT57Q9NWB7 429 aa11.55□□□□□ -0.56
SSBP2-202ENST00000504136 APAF1O14727 1248 aa11.54□□□□□ -0.56
SSBP2-202ENST00000504136 ZMYND10O75800 440 aa11.54□□□□□ -0.56
SSBP2-202ENST00000504136 NTSR2O95665 410 aa11.54□□□□□ -0.56
SSBP2-202ENST00000504136 MYL6BP14649 208 aa11.54□□□□□ -0.56
SSBP2-202ENST00000504136 CALD1Q05682 793 aaKnown RBP11.54□□□□□ -0.56
SSBP2-202ENST00000504136 NEUROD2Q15784 382 aa11.54□□□□□ -0.56
SSBP2-202ENST00000504136 PARP10Q53GL7 1025 aa11.54□□□□□ -0.56
SSBP2-202ENST00000504136 SOGA3Q5TF21 947 aa11.54□□□□□ -0.56
SSBP2-202ENST00000504136 PRPF40BQ6NWY9 871 aaKnown RBP11.54□□□□□ -0.56
SSBP2-202ENST00000504136 THSD4Q6ZMP0 1018 aa11.54□□□□□ -0.56
SSBP2-202ENST00000504136 CCDC24Q8N4L8 307 aa11.54□□□□□ -0.56
SSBP2-202ENST00000504136 RNF181Q9P0P0 153 aa11.54□□□□□ -0.56
SSBP2-202ENST00000504136 WDR90Q96KV7 1748 aa11.54□□□□□ -0.56
SSBP2-202ENST00000504136 LAMB2P55268 1798 aa11.54□□□□□ -0.56
SSBP2-202ENST00000504136 GOLGA8CPA6NN73 597 aa11.53□□□□□ -0.56
SSBP2-202ENST00000504136 HOXA10P31260 410 aaPredicted RBP11.53□□□□□ -0.56
SSBP2-202ENST00000504136 RASSF7Q02833 373 aa11.53□□□□□ -0.56
SSBP2-202ENST00000504136 MAP2K5Q13163 448 aa11.53□□□□□ -0.56
SSBP2-202ENST00000504136 KRT24Q2M2I5 525 aa11.53□□□□□ -0.56
SSBP2-202ENST00000504136 PXYLP1Q8TE99 480 aa11.53□□□□□ -0.56
SSBP2-202ENST00000504136 ZNF622Q969S3 477 aaKnown RBP eCLIP11.53□□□□□ -0.56
SSBP2-202ENST00000504136 ZBTB3Q9H5J0 574 aa11.53□□□□□ -0.56
SSBP2-202ENST00000504136 MBIPQ9NS73 344 aa11.53□□□□□ -0.56
SSBP2-202ENST00000504136 EIF2S2P20042 333 aaKnown RBP11.52□□□□□ -0.57
SSBP2-202ENST00000504136 GNAI1P63096 354 aa11.52□□□□□ -0.57
SSBP2-202ENST00000504136 SLC10A5Q5PT55 438 aa11.52□□□□□ -0.57
SSBP2-202ENST00000504136 SUSD4Q5VX71 490 aa11.52□□□□□ -0.57
SSBP2-202ENST00000504136 METTL3Q86U44 580 aaKnown RBP11.52□□□□□ -0.57
SSBP2-202ENST00000504136 ANKK1Q8NFD2 765 aa11.52□□□□□ -0.57
SSBP2-202ENST00000504136 RBM46Q8TBY0 533 aaKnown RBP11.52□□□□□ -0.57
SSBP2-202ENST00000504136 SOWAHBA6NEL2 793 aa11.51□□□□□ -0.57
SSBP2-202ENST00000504136 NPHP1O15259 732 aa11.51□□□□□ -0.57
SSBP2-202ENST00000504136 C21orf2O43822 256 aa11.51□□□□□ -0.57
SSBP2-202ENST00000504136 HSP90AB3PQ58FF7 597 aa11.51□□□□□ -0.57
SSBP2-202ENST00000504136 HDGFL1Q5TGJ6 251 aa11.51□□□□□ -0.57
SSBP2-202ENST00000504136 COPS6Q7L5N1 327 aa11.51□□□□□ -0.57
SSBP2-202ENST00000504136 PPP1R42Q7Z4L9 355 aa11.51□□□□□ -0.57
SSBP2-202ENST00000504136 NGEFQ8N5V2 710 aa11.51□□□□□ -0.57
SSBP2-202ENST00000504136 DBF4Q9UBU7 674 aaPredicted RBP11.51□□□□□ -0.57
SSBP2-202ENST00000504136 IL16Q14005 1332 aa11.51□□□□□ -0.57
SSBP2-202ENST00000504136 KDM2BQ8NHM5 1336 aa11.51□□□□□ -0.57
SSBP2-202ENST00000504136 DDX60Q8IY21 1712 aaKnown RBP11.51□□□□□ -0.57
SSBP2-202ENST00000504136 GLTPD2A6NH11 291 aa11.5□□□□□ -0.57
SSBP2-202ENST00000504136 TOMM70O94826 608 aa11.5□□□□□ -0.57
SSBP2-202ENST00000504136 ANXA1P04083 346 aa11.5□□□□□ -0.57
SSBP2-202ENST00000504136 OATP04181 439 aa11.5□□□□□ -0.57
SSBP2-202ENST00000504136 ALDH1B1P30837 517 aa11.5□□□□□ -0.57
SSBP2-202ENST00000504136 ERFEQ4G0M1 354 aa11.5□□□□□ -0.57
SSBP2-202ENST00000504136 DUSP27Q5VZP5 1158 aa11.5□□□□□ -0.57
SSBP2-202ENST00000504136 NUTM1Q86Y26 1132 aa11.5□□□□□ -0.57
SSBP2-202ENST00000504136 ZNF526Q8TF50 670 aaPredicted RBP11.5□□□□□ -0.57
SSBP2-202ENST00000504136 XAGE3Q8WTP9 111 aa11.5□□□□□ -0.57
SSBP2-202ENST00000504136 NMRK2Q9NPI5 230 aa11.5□□□□□ -0.57
SSBP2-202ENST00000504136 CHPF2Q9P2E5 772 aa11.5□□□□□ -0.57
SSBP2-202ENST00000504136 LRRC37AA6NMS7 1700 aa11.49□□□□□ -0.57
SSBP2-202ENST00000504136 ANP32CO43423 234 aa11.49□□□□□ -0.57
SSBP2-202ENST00000504136 GPTP24298 496 aa11.49□□□□□ -0.57
SSBP2-202ENST00000504136 BCAMP50895 628 aa11.49□□□□□ -0.57
SSBP2-202ENST00000504136 TRIM28Q13263 835 aaKnown RBP11.49□□□□□ -0.57
SSBP2-202ENST00000504136 TCIRG1Q13488 830 aa11.49□□□□□ -0.57
SSBP2-202ENST00000504136 CCDC93Q567U6 631 aa11.49□□□□□ -0.57
SSBP2-202ENST00000504136 SAMD7Q7Z3H4 446 aa11.49□□□□□ -0.57
SSBP2-202ENST00000504136 NLRP10Q86W26 655 aa11.49□□□□□ -0.57
SSBP2-202ENST00000504136 PLBD2Q8NHP8 589 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms