RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 NEURL1BA8MQ27 555 aa11.52□□□□□ -0.57
ARHGEF28-206ENST00000504003 TRIM28Q13263 835 aaKnown RBP11.52□□□□□ -0.57
ARHGEF28-206ENST00000504003 PPP1R42Q7Z4L9 355 aa11.52□□□□□ -0.57
ARHGEF28-206ENST00000504003 TNNQ9UQP3 1299 aa11.52□□□□□ -0.57
ARHGEF28-206ENST00000504003 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.51□□□□□ -0.57
ARHGEF28-206ENST00000504003 GRM8O00222 908 aa11.51□□□□□ -0.57
ARHGEF28-206ENST00000504003 NPHP1O15259 732 aa11.51□□□□□ -0.57
ARHGEF28-206ENST00000504003 HMMRO75330 724 aa11.51□□□□□ -0.57
ARHGEF28-206ENST00000504003 GCKRQ14397 625 aa11.51□□□□□ -0.57
ARHGEF28-206ENST00000504003 RPAP2Q8IXW5 612 aaPredicted RBP11.51□□□□□ -0.57
ARHGEF28-206ENST00000504003 ARHGEF1Q92888 912 aaKnown RBP11.51□□□□□ -0.57
ARHGEF28-206ENST00000504003 SETDB2Q96T68 719 aa11.51□□□□□ -0.57
ARHGEF28-206ENST00000504003 NYXQ9GZU5 481 aa11.51□□□□□ -0.57
ARHGEF28-206ENST00000504003 RWDD1Q9H446 243 aaPredicted RBP11.51□□□□□ -0.57
ARHGEF28-206ENST00000504003 ZBTB40Q9NUA8 1239 aa11.51□□□□□ -0.57
ARHGEF28-206ENST00000504003 RABGEF1Q9UJ41 708 aa11.51□□□□□ -0.57
ARHGEF28-206ENST00000504003 UBR3Q6ZT12 1888 aa11.51□□□□□ -0.57
ARHGEF28-206ENST00000504003 BCORQ6W2J9 1755 aa11.5□□□□□ -0.57
ARHGEF28-206ENST00000504003 ATP5J2-PTCD1G3V325 749 aa11.5□□□□□ -0.57
ARHGEF28-206ENST00000504003 CAMTA2O94983 1202 aa11.5□□□□□ -0.57
ARHGEF28-206ENST00000504003 SLC15A2Q16348 729 aa11.5□□□□□ -0.57
ARHGEF28-206ENST00000504003 CWF19L2Q2TBE0 894 aaKnown RBP11.5□□□□□ -0.57
ARHGEF28-206ENST00000504003 IFFO2Q5TF58 517 aa11.5□□□□□ -0.57
ARHGEF28-206ENST00000504003 ISCA1Q9BUE6 129 aa11.5□□□□□ -0.57
ARHGEF28-206ENST00000504003 NIP7Q9Y221 180 aaKnown RBP eCLIP11.5□□□□□ -0.57
ARHGEF28-206ENST00000504003 USP42Q9H9J4 1324 aaKnown RBP11.5□□□□□ -0.57
ARHGEF28-206ENST00000504003 SCN7AQ01118 1682 aa11.49□□□□□ -0.57
ARHGEF28-206ENST00000504003 IGKV5-2P06315 115 aa11.49□□□□□ -0.57
ARHGEF28-206ENST00000504003 GTF2E1P29083 439 aaPredicted RBP11.49□□□□□ -0.57
ARHGEF28-206ENST00000504003 HLFQ16534 295 aa11.49□□□□□ -0.57
ARHGEF28-206ENST00000504003 USPL1Q5W0Q7 1092 aa11.49□□□□□ -0.57
ARHGEF28-206ENST00000504003 ZNF34Q8IZ26 560 aa11.49□□□□□ -0.57
ARHGEF28-206ENST00000504003 NLGN1Q8N2Q7 840 aa11.49□□□□□ -0.57
ARHGEF28-206ENST00000504003 ANKK1Q8NFD2 765 aa11.49□□□□□ -0.57
ARHGEF28-206ENST00000504003 MEIS3Q99687 375 aa11.49□□□□□ -0.57
ARHGEF28-206ENST00000504003 USP44Q9H0E7 712 aa11.49□□□□□ -0.57
ARHGEF28-206ENST00000504003 TRMT112Q9UI30 125 aaKnown RBP11.49□□□□□ -0.57
ARHGEF28-206ENST00000504003 PCCAP05165 728 aaPredicted RBP11.48□□□□□ -0.57
ARHGEF28-206ENST00000504003 DEFB132Q7Z7B7 95 aa11.48□□□□□ -0.57
ARHGEF28-206ENST00000504003 ZBTB38Q8NAP3 1195 aaPredicted RBP11.48□□□□□ -0.57
ARHGEF28-206ENST00000504003 EPAS1Q99814 870 aa11.48□□□□□ -0.57
ARHGEF28-206ENST00000504003 UTP14AQ9BVJ6 771 aaKnown RBP11.48□□□□□ -0.57
ARHGEF28-206ENST00000504003 UTYO14607 1347 aa11.48□□□□□ -0.57
ARHGEF28-206ENST00000504003 C4AP0C0L4 1744 aa11.47□□□□□ -0.57
ARHGEF28-206ENST00000504003 QSER1Q2KHR3 1735 aa11.47□□□□□ -0.57
ARHGEF28-206ENST00000504003 GPTP24298 496 aa11.47□□□□□ -0.57
ARHGEF28-206ENST00000504003 CAMK2BQ13554 666 aa11.47□□□□□ -0.57
ARHGEF28-206ENST00000504003 TPTE2Q6XPS3 522 aa11.47□□□□□ -0.57
ARHGEF28-206ENST00000504003 UBE3BQ7Z3V4 1068 aa11.47□□□□□ -0.57
ARHGEF28-206ENST00000504003 NLRP10Q86W26 655 aa11.47□□□□□ -0.57
ARHGEF28-206ENST00000504003 CARMIL3Q8ND23 1372 aa11.46□□□□□ -0.57
ARHGEF28-206ENST00000504003 SH3TC1Q8TE82 1336 aa11.46□□□□□ -0.57
ARHGEF28-206ENST00000504003 H7C1W4 665 aa11.46□□□□□ -0.57
ARHGEF28-206ENST00000504003 RGS20O76081 388 aa11.46□□□□□ -0.57
ARHGEF28-206ENST00000504003 NBPF7P0C2Y1 421 aaPredicted RBP11.46□□□□□ -0.57
ARHGEF28-206ENST00000504003 ZNF827Q17R98 1081 aa11.46□□□□□ -0.57
ARHGEF28-206ENST00000504003 NBPF5PQ86XG9 351 aaPredicted RBP11.46□□□□□ -0.57
ARHGEF28-206ENST00000504003 LRRFIP2Q9Y608 721 aaKnown RBP11.46□□□□□ -0.57
ARHGEF28-206ENST00000504003 CDHR2Q9BYE9 1310 aa11.45□□□□□ -0.58
ARHGEF28-206ENST00000504003 PROX2Q3B8N5 592 aa11.45□□□□□ -0.58
ARHGEF28-206ENST00000504003 HSP90AB4PQ58FF6 505 aa11.45□□□□□ -0.58
ARHGEF28-206ENST00000504003 BICDL1Q6ZP65 573 aa11.45□□□□□ -0.58
ARHGEF28-206ENST00000504003 CENPQQ7L2Z9 268 aaPredicted RBP11.45□□□□□ -0.58
ARHGEF28-206ENST00000504003 LAPTM4BQ86VI4 370 aa11.45□□□□□ -0.58
ARHGEF28-206ENST00000504003 ANKRD44Q8N8A2 993 aa11.45□□□□□ -0.58
ARHGEF28-206ENST00000504003 SLC16A10Q8TF71 515 aa11.45□□□□□ -0.58
ARHGEF28-206ENST00000504003 SRP68Q9UHB9 627 aaKnown RBP11.45□□□□□ -0.58
ARHGEF28-206ENST00000504003 GYS1P13807 737 aa11.44□□□□□ -0.58
ARHGEF28-206ENST00000504003 ST5P78524 1137 aa11.44□□□□□ -0.58
ARHGEF28-206ENST00000504003 ATP8B2P98198 1209 aa11.44□□□□□ -0.58
ARHGEF28-206ENST00000504003 HDAC1Q13547 482 aaPredicted RBP11.44□□□□□ -0.58
ARHGEF28-206ENST00000504003 TBC1D9BQ66K14 1250 aa11.44□□□□□ -0.58
ARHGEF28-206ENST00000504003 COL23A1Q86Y22 540 aaPredicted RBP11.44□□□□□ -0.58
ARHGEF28-206ENST00000504003 GCC1Q96CN9 775 aa11.44□□□□□ -0.58
ARHGEF28-206ENST00000504003 C1orf115Q9H7X2 142 aa11.44□□□□□ -0.58
ARHGEF28-206ENST00000504003 PNPLA7Q6ZV29 1317 aa11.43□□□□□ -0.58
ARHGEF28-206ENST00000504003 FAM177BA6PVY3 158 aa11.43□□□□□ -0.58
ARHGEF28-206ENST00000504003 DPYSL4O14531 572 aa11.43□□□□□ -0.58
ARHGEF28-206ENST00000504003 IRS4O14654 1257 aaPredicted RBP11.43□□□□□ -0.58
ARHGEF28-206ENST00000504003 SRGAP3O43295 1099 aa11.43□□□□□ -0.58
ARHGEF28-206ENST00000504003 PDE8AO60658 829 aa11.43□□□□□ -0.58
ARHGEF28-206ENST00000504003 COL9A1P20849 921 aa11.43□□□□□ -0.58
ARHGEF28-206ENST00000504003 SUSD4Q5VX71 490 aa11.43□□□□□ -0.58
ARHGEF28-206ENST00000504003 B4GALNT3Q6L9W6 998 aa11.43□□□□□ -0.58
ARHGEF28-206ENST00000504003 CEP85Q6P2H3 762 aa11.43□□□□□ -0.58
ARHGEF28-206ENST00000504003 BBXQ8WY36 941 aaPredicted RBP11.43□□□□□ -0.58
ARHGEF28-206ENST00000504003 FAM89AQ96GI7 184 aa11.43□□□□□ -0.58
ARHGEF28-206ENST00000504003 PLA2G12BQ9BX93 195 aa11.43□□□□□ -0.58
ARHGEF28-206ENST00000504003 CHMP3Q9Y3E7 222 aa11.43□□□□□ -0.58
ARHGEF28-206ENST00000504003 PARP3Q9Y6F1 533 aa11.43□□□□□ -0.58
ARHGEF28-206ENST00000504003 TUBGCP6Q96RT7 1819 aa11.42□□□□□ -0.58
ARHGEF28-206ENST00000504003 UBN2Q6ZU65 1347 aa11.42□□□□□ -0.58
ARHGEF28-206ENST00000504003 MTX1Q13505 466 aa11.42□□□□□ -0.58
ARHGEF28-206ENST00000504003 CCDC57Q2TAC2 916 aa11.42□□□□□ -0.58
ARHGEF28-206ENST00000504003 RTL5Q5HYW3 569 aaPredicted RBP11.42□□□□□ -0.58
ARHGEF28-206ENST00000504003 CNBD1Q8NA66 436 aa11.42□□□□□ -0.58
ARHGEF28-206ENST00000504003 SUCLG2Q96I99 432 aa11.42□□□□□ -0.58
ARHGEF28-206ENST00000504003 BICC1Q9H694 974 aaKnown RBP11.42□□□□□ -0.58
ARHGEF28-206ENST00000504003 PCDHB15Q9Y5E8 787 aa11.42□□□□□ -0.58
ARHGEF28-206ENST00000504003 MYH3P11055 1940 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms