RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 SHTN1A0MZ66 631 aa15.3■□□□□ 0.04
MED28-203ENST00000503945 YDJCA8MPS7 323 aa15.3■□□□□ 0.04
MED28-203ENST00000503945 RIMBP2O15034 1052 aa15.3■□□□□ 0.04
MED28-203ENST00000503945 VAMP4O75379 141 aa15.3■□□□□ 0.04
MED28-203ENST00000503945 CELF2O95319 508 aaKnown RBP15.3■□□□□ 0.04
MED28-203ENST00000503945 SAPCD2Q86UD0 394 aa15.3■□□□□ 0.04
MED28-203ENST00000503945 EYA3Q99504 573 aa15.3■□□□□ 0.04
MED28-203ENST00000503945 BEGAINQ9BUH8 593 aa15.3■□□□□ 0.04
MED28-203ENST00000503945 ZC3H12CQ9C0D7 883 aaKnown RBP15.3■□□□□ 0.04
MED28-203ENST00000503945 TSKSQ9UJT2 592 aa15.3■□□□□ 0.04
MED28-203ENST00000503945 THSD7BQ9C0I4 1608 aa15.29■□□□□ 0.04
MED28-203ENST00000503945 G3V3G9 751 aa15.29■□□□□ 0.04
MED28-203ENST00000503945 MAP2K2P36507 400 aa15.29■□□□□ 0.04
MED28-203ENST00000503945 GPSM2P81274 684 aa15.29■□□□□ 0.04
MED28-203ENST00000503945 DCAF8Q5TAQ9 597 aa15.29■□□□□ 0.04
MED28-203ENST00000503945 G2E3Q7L622 706 aa15.29■□□□□ 0.04
MED28-203ENST00000503945 SEC31BQ9NQW1 1179 aa15.29■□□□□ 0.04
MED28-203ENST00000503945 ANKIB1Q9P2G1 1089 aa15.29■□□□□ 0.04
MED28-203ENST00000503945 POLLQ9UGP5 575 aa15.29■□□□□ 0.04
MED28-203ENST00000503945 CNOT7Q9UIV1 285 aaKnown RBP15.29■□□□□ 0.04
MED28-203ENST00000503945 CASP8AP2Q9UKL3 1982 aa15.28■□□□□ 0.04
MED28-203ENST00000503945 IGKV5-2P06315 115 aa15.28■□□□□ 0.04
MED28-203ENST00000503945 EXOSC9Q06265 439 aaKnown RBP15.28■□□□□ 0.04
MED28-203ENST00000503945 TRPM4Q8TD43 1214 aa15.28■□□□□ 0.04
MED28-203ENST00000503945 CCDC85AQ96PX6 553 aaPredicted RBP15.28■□□□□ 0.04
MED28-203ENST00000503945 MYH16Q9H6N6 1097 aa15.28■□□□□ 0.04
MED28-203ENST00000503945 FANCIQ9NVI1 1328 aa15.27■□□□□ 0.04
MED28-203ENST00000503945 DDX60Q8IY21 1712 aaKnown RBP15.27■□□□□ 0.04
MED28-203ENST00000503945 H7C1D1 291 aa15.27■□□□□ 0.04
MED28-203ENST00000503945 FLIIQ13045 1269 aa15.27■□□□□ 0.04
MED28-203ENST00000503945 FKBP5Q13451 457 aaPredicted RBP15.27■□□□□ 0.04
MED28-203ENST00000503945 ANKRD18AQ8IVF6 992 aa15.27■□□□□ 0.04
MED28-203ENST00000503945 TBC1D16Q8TBP0 767 aa15.27■□□□□ 0.04
MED28-203ENST00000503945 ZC3H15Q8WU90 426 aaKnown RBP15.27■□□□□ 0.04
MED28-203ENST00000503945 ZNF408Q9H9D4 720 aa15.27■□□□□ 0.04
MED28-203ENST00000503945 ZBTB12Q9Y330 459 aaPredicted RBP15.27■□□□□ 0.04
MED28-203ENST00000503945 CDHR2Q9BYE9 1310 aa15.26■□□□□ 0.03
MED28-203ENST00000503945 NEURL1BA8MQ27 555 aa15.26■□□□□ 0.03
MED28-203ENST00000503945 H7C1W4 665 aa15.26■□□□□ 0.03
MED28-203ENST00000503945 CWF19L2Q2TBE0 894 aaKnown RBP15.26■□□□□ 0.03
MED28-203ENST00000503945 DLK2Q6UY11 383 aa15.26■□□□□ 0.03
MED28-203ENST00000503945 CDC37L1Q7L3B6 337 aa15.26■□□□□ 0.03
MED28-203ENST00000503945 USP48Q86UV5 1035 aa15.26■□□□□ 0.03
MED28-203ENST00000503945 HHIPL1Q96JK4 782 aa15.26■□□□□ 0.03
MED28-203ENST00000503945 CDC5LQ99459 802 aaKnown RBP15.26■□□□□ 0.03
MED28-203ENST00000503945 PODXL2Q9NZ53 605 aa15.26■□□□□ 0.03
MED28-203ENST00000503945 CCDC85CA6NKD9 419 aa15.25■□□□□ 0.03
MED28-203ENST00000503945 DOK7Q18PE1 504 aa15.25■□□□□ 0.03
MED28-203ENST00000503945 SAMD7Q7Z3H4 446 aa15.25■□□□□ 0.03
MED28-203ENST00000503945 MICALL2Q8IY33 904 aa15.25■□□□□ 0.03
MED28-203ENST00000503945 TTLL11Q8NHH1 800 aa15.25■□□□□ 0.03
MED28-203ENST00000503945 DNAAF4Q8WXU2 420 aa15.25■□□□□ 0.03
MED28-203ENST00000503945 DBNDD1Q9H9R9 158 aa15.25■□□□□ 0.03
MED28-203ENST00000503945 KCNQ5Q9NR82 932 aa15.25■□□□□ 0.03
MED28-203ENST00000503945 GGA1Q9UJY5 639 aa15.25■□□□□ 0.03
MED28-203ENST00000503945 DUOX1Q9NRD9 1551 aa15.24■□□□□ 0.03
MED28-203ENST00000503945 PSMD14O00487 310 aa15.24■□□□□ 0.03
MED28-203ENST00000503945 CTSWP56202 376 aa15.24■□□□□ 0.03
MED28-203ENST00000503945 GCKRQ14397 625 aa15.24■□□□□ 0.03
MED28-203ENST00000503945 LINS1Q8NG48 757 aa15.24■□□□□ 0.03
MED28-203ENST00000503945 DPF2Q92785 391 aa15.24■□□□□ 0.03
MED28-203ENST00000503945 ZIC5Q96T25 663 aa15.24■□□□□ 0.03
MED28-203ENST00000503945 LRRC37AA6NMS7 1700 aa15.23■□□□□ 0.03
MED28-203ENST00000503945 COL4A1P02462 1669 aa15.23■□□□□ 0.03
MED28-203ENST00000503945 ECE2O60344 883 aa15.23■□□□□ 0.03
MED28-203ENST00000503945 UFL1O94874 794 aa15.23■□□□□ 0.03
MED28-203ENST00000503945 FAM161AQ3B820 660 aa15.23■□□□□ 0.03
MED28-203ENST00000503945 UBE3BQ7Z3V4 1068 aa15.23■□□□□ 0.03
MED28-203ENST00000503945 SPINK5Q9NQ38 1064 aaPredicted RBP15.23■□□□□ 0.03
MED28-203ENST00000503945 BSDC1Q9NW68 430 aaPredicted RBP15.23■□□□□ 0.03
MED28-203ENST00000503945 EGFRP00533 1210 aa15.22■□□□□ 0.03
MED28-203ENST00000503945 ATP2B4P23634 1241 aa15.22■□□□□ 0.03
MED28-203ENST00000503945 TBC1D10BQ4KMP7 808 aaPredicted RBP15.22■□□□□ 0.03
MED28-203ENST00000503945 RBM26Q5T8P6 1007 aaKnown RBP15.22■□□□□ 0.03
MED28-203ENST00000503945 CA12O43570 354 aa15.21■□□□□ 0.03
MED28-203ENST00000503945 RPS12P25398 132 aaKnown RBP15.21■□□□□ 0.03
MED28-203ENST00000503945 IGHMBP2P38935 993 aaKnown RBP15.21■□□□□ 0.03
MED28-203ENST00000503945 BRPF1P55201 1214 aaPredicted RBP15.21■□□□□ 0.03
MED28-203ENST00000503945 GREM2Q9H772 168 aa15.21■□□□□ 0.03
MED28-203ENST00000503945 MINPP1Q9UNW1 487 aa15.21■□□□□ 0.03
MED28-203ENST00000503945 XDHP47989 1333 aa15.2■□□□□ 0.02
MED28-203ENST00000503945 RGS19P49795 217 aa15.2■□□□□ 0.02
MED28-203ENST00000503945 HUNKP57058 714 aa15.2■□□□□ 0.02
MED28-203ENST00000503945 MPHOSPH8Q99549 860 aa15.2■□□□□ 0.02
MED28-203ENST00000503945 PLA2G12BQ9BX93 195 aa15.2■□□□□ 0.02
MED28-203ENST00000503945 MCOLN1Q9GZU1 580 aa15.2■□□□□ 0.02
MED28-203ENST00000503945 RTL9Q8NET4 1388 aa15.2■□□□□ 0.02
MED28-203ENST00000503945 SCN9AQ15858 1988 aa15.19■□□□□ 0.02
MED28-203ENST00000503945 CSF1RP07333 972 aa15.19■□□□□ 0.02
MED28-203ENST00000503945 VIL1P09327 827 aaKnown RBP15.19■□□□□ 0.02
MED28-203ENST00000503945 KRT26Q7Z3Y9 468 aa15.19■□□□□ 0.02
MED28-203ENST00000503945 PODNQ7Z5L7 613 aa15.19■□□□□ 0.02
MED28-203ENST00000503945 ADM5C9JUS6 153 aa15.18■□□□□ 0.02
MED28-203ENST00000503945 F6X3S4 739 aa15.18■□□□□ 0.02
MED28-203ENST00000503945 ITGA6P23229 1130 aa15.18■□□□□ 0.02
MED28-203ENST00000503945 MLLT1Q03111 559 aaPredicted RBP15.18■□□□□ 0.02
MED28-203ENST00000503945 NOGQ13253 232 aa15.18■□□□□ 0.02
MED28-203ENST00000503945 RGMBQ6NW40 437 aa15.18■□□□□ 0.02
MED28-203ENST00000503945 DCPSQ96C86 337 aaKnown RBP15.18■□□□□ 0.02
MED28-203ENST00000503945 ANKRD2Q9GZV1 360 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms