RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 DDX58O95786 925 aaKnown RBP7.9□□□□□ -1.14
LSM3P4-201ENST00000502948 ZNF280AP59817 542 aaPredicted RBP7.9□□□□□ -1.14
LSM3P4-201ENST00000502948 FKBP1BP68106 108 aa7.9□□□□□ -1.14
LSM3P4-201ENST00000502948 GPSM2P81274 684 aa7.9□□□□□ -1.14
LSM3P4-201ENST00000502948 DDX10Q13206 875 aaKnown RBP7.9□□□□□ -1.14
LSM3P4-201ENST00000502948 NEUROD2Q15784 382 aa7.9□□□□□ -1.14
LSM3P4-201ENST00000502948 CCDC152Q4G0S7 254 aa7.9□□□□□ -1.14
LSM3P4-201ENST00000502948 RIC3Q7Z5B4 369 aa7.9□□□□□ -1.14
LSM3P4-201ENST00000502948 PODNQ7Z5L7 613 aa7.9□□□□□ -1.14
LSM3P4-201ENST00000502948 CCDC146Q8IYE0 955 aa7.9□□□□□ -1.14
LSM3P4-201ENST00000502948 TRPM4Q8TD43 1214 aa7.9□□□□□ -1.14
LSM3P4-201ENST00000502948 CCDC102AQ96A19 550 aa7.9□□□□□ -1.14
LSM3P4-201ENST00000502948 METTL22Q9BUU2 404 aaPredicted RBP7.9□□□□□ -1.14
LSM3P4-201ENST00000502948 ZC3H12CQ9C0D7 883 aaKnown RBP7.9□□□□□ -1.14
LSM3P4-201ENST00000502948 XDHP47989 1333 aa7.89□□□□□ -1.15
LSM3P4-201ENST00000502948 FAM155AB1AL88 458 aaPredicted RBP7.89□□□□□ -1.15
LSM3P4-201ENST00000502948 ATP5J2-PTCD1G3V325 749 aa7.89□□□□□ -1.15
LSM3P4-201ENST00000502948 C6orf229H3BNL8 230 aa7.89□□□□□ -1.15
LSM3P4-201ENST00000502948 FMR1Q06787 632 aaKnown RBP eCLIP7.89□□□□□ -1.15
LSM3P4-201ENST00000502948 CCDC30Q5VVM6 783 aa7.89□□□□□ -1.15
LSM3P4-201ENST00000502948 DCPSQ96C86 337 aaKnown RBP7.89□□□□□ -1.15
LSM3P4-201ENST00000502948 CWC25Q9NXE8 425 aaPredicted RBP7.89□□□□□ -1.15
LSM3P4-201ENST00000502948 PAPPA2Q9BXP8 1791 aa7.89□□□□□ -1.15
LSM3P4-201ENST00000502948 CASP8AP2Q9UKL3 1982 aa7.88□□□□□ -1.15
LSM3P4-201ENST00000502948 MED23Q9ULK4 1368 aa7.88□□□□□ -1.15
LSM3P4-201ENST00000502948 IL16Q14005 1332 aa7.88□□□□□ -1.15
LSM3P4-201ENST00000502948 MYO3BQ8WXR4 1341 aa7.88□□□□□ -1.15
LSM3P4-201ENST00000502948 APAF1O14727 1248 aa7.88□□□□□ -1.15
LSM3P4-201ENST00000502948 ATP2B4P23634 1241 aa7.88□□□□□ -1.15
LSM3P4-201ENST00000502948 RGMBQ6NW40 437 aa7.88□□□□□ -1.15
LSM3P4-201ENST00000502948 RSBN1LQ6PCB5 846 aaPredicted RBP7.88□□□□□ -1.15
LSM3P4-201ENST00000502948 KSR2Q6VAB6 950 aa7.88□□□□□ -1.15
LSM3P4-201ENST00000502948 SAMD7Q7Z3H4 446 aa7.88□□□□□ -1.15
LSM3P4-201ENST00000502948 KRT26Q7Z3Y9 468 aa7.88□□□□□ -1.15
LSM3P4-201ENST00000502948 C2orf69Q8N8R5 385 aa7.88□□□□□ -1.15
LSM3P4-201ENST00000502948 GMLQ99445 158 aa7.88□□□□□ -1.15
LSM3P4-201ENST00000502948 PLA2G12BQ9BX93 195 aa7.88□□□□□ -1.15
LSM3P4-201ENST00000502948 PHAXQ9H814 394 aaKnown RBP7.88□□□□□ -1.15
LSM3P4-201ENST00000502948 DBNDD1Q9H9R9 158 aa7.88□□□□□ -1.15
LSM3P4-201ENST00000502948 GBA2Q9HCG7 927 aaPredicted RBP7.88□□□□□ -1.15
LSM3P4-201ENST00000502948 BSDC1Q9NW68 430 aaPredicted RBP7.88□□□□□ -1.15
LSM3P4-201ENST00000502948 GGA1Q9UJY5 639 aa7.88□□□□□ -1.15
LSM3P4-201ENST00000502948 ZBTB12Q9Y330 459 aaPredicted RBP7.88□□□□□ -1.15
LSM3P4-201ENST00000502948 LAS1LQ9Y4W2 734 aaKnown RBP7.88□□□□□ -1.15
LSM3P4-201ENST00000502948 AOC2O75106 756 aa7.87□□□□□ -1.15
LSM3P4-201ENST00000502948 HUNKP57058 714 aa7.87□□□□□ -1.15
LSM3P4-201ENST00000502948 KIF4BQ2VIQ3 1234 aa7.87□□□□□ -1.15
LSM3P4-201ENST00000502948 NOM1Q5C9Z4 860 aaKnown RBP7.87□□□□□ -1.15
LSM3P4-201ENST00000502948 PAXIP1Q6ZW49 1069 aaPredicted RBP7.87□□□□□ -1.15
LSM3P4-201ENST00000502948 USP48Q86UV5 1035 aa7.87□□□□□ -1.15
LSM3P4-201ENST00000502948 ANKRD18AQ8IVF6 992 aa7.87□□□□□ -1.15
LSM3P4-201ENST00000502948 SULF1Q8IWU6 871 aa7.87□□□□□ -1.15
LSM3P4-201ENST00000502948 CDC5LQ99459 802 aaKnown RBP7.87□□□□□ -1.15
LSM3P4-201ENST00000502948 ANKIB1Q9P2G1 1089 aa7.87□□□□□ -1.15
LSM3P4-201ENST00000502948 ECM29Q5VYK3 1845 aa7.87□□□□□ -1.15
LSM3P4-201ENST00000502948 SHTN1A0MZ66 631 aa7.86□□□□□ -1.15
LSM3P4-201ENST00000502948 RIMBP2O15034 1052 aa7.86□□□□□ -1.15
LSM3P4-201ENST00000502948 UFL1O94874 794 aa7.86□□□□□ -1.15
LSM3P4-201ENST00000502948 EGFRP00533 1210 aa7.86□□□□□ -1.15
LSM3P4-201ENST00000502948 SLC10A3P09131 477 aa7.86□□□□□ -1.15
LSM3P4-201ENST00000502948 USP17L8P0C7I0 530 aa7.86□□□□□ -1.15
LSM3P4-201ENST00000502948 CTSWP56202 376 aa7.86□□□□□ -1.15
LSM3P4-201ENST00000502948 NEXNQ0ZGT2 675 aa7.86□□□□□ -1.15
LSM3P4-201ENST00000502948 C8orf58Q8NAV2 365 aa7.86□□□□□ -1.15
LSM3P4-201ENST00000502948 TTLL11Q8NHH1 800 aa7.86□□□□□ -1.15
LSM3P4-201ENST00000502948 MYD88Q99836 296 aa7.86□□□□□ -1.15
LSM3P4-201ENST00000502948 SEC31BQ9NQW1 1179 aa7.86□□□□□ -1.15
LSM3P4-201ENST00000502948 KCNQ5Q9NR82 932 aa7.86□□□□□ -1.15
LSM3P4-201ENST00000502948 SPEF2Q9C093 1822 aa7.86□□□□□ -1.15
LSM3P4-201ENST00000502948 A0A1B0GUL6 1792 aa7.86□□□□□ -1.15
LSM3P4-201ENST00000502948 USP17L3A6NCW0 530 aa7.85□□□□□ -1.15
LSM3P4-201ENST00000502948 USP17L4A6NCW7 530 aa7.85□□□□□ -1.15
LSM3P4-201ENST00000502948 UNCXA6NJT0 531 aa7.85□□□□□ -1.15
LSM3P4-201ENST00000502948 H7C1W4 665 aa7.85□□□□□ -1.15
LSM3P4-201ENST00000502948 IGKV5-2P06315 115 aa7.85□□□□□ -1.15
LSM3P4-201ENST00000502948 MLLT1Q03111 559 aaPredicted RBP7.85□□□□□ -1.15
LSM3P4-201ENST00000502948 DOK7Q18PE1 504 aa7.85□□□□□ -1.15
LSM3P4-201ENST00000502948 TBC1D10BQ4KMP7 808 aaPredicted RBP7.85□□□□□ -1.15
LSM3P4-201ENST00000502948 STRIP1Q5VSL9 837 aa7.85□□□□□ -1.15
LSM3P4-201ENST00000502948 USP17L1Q7RTZ2 530 aa7.85□□□□□ -1.15
LSM3P4-201ENST00000502948 CFHR5Q9BXR6 569 aa7.85□□□□□ -1.15
LSM3P4-201ENST00000502948 MCOLN1Q9GZU1 580 aa7.85□□□□□ -1.15
LSM3P4-201ENST00000502948 COA1Q9GZY4 146 aa7.85□□□□□ -1.15
LSM3P4-201ENST00000502948 MYOZ2Q9NPC6 264 aa7.85□□□□□ -1.15
LSM3P4-201ENST00000502948 MAP3K2Q9Y2U5 619 aa7.85□□□□□ -1.15
LSM3P4-201ENST00000502948 LEMD3Q9Y2U8 911 aa7.85□□□□□ -1.15
LSM3P4-201ENST00000502948 COL1A1P02452 1464 aaPredicted RBP7.85□□□□□ -1.15
LSM3P4-201ENST00000502948 PI4KAP2A4QPH2 592 aa7.84□□□□□ -1.15
LSM3P4-201ENST00000502948 NEURL1BA8MQ27 555 aa7.84□□□□□ -1.15
LSM3P4-201ENST00000502948 G3V3G9 751 aa7.84□□□□□ -1.15
LSM3P4-201ENST00000502948 CSF1RP07333 972 aa7.84□□□□□ -1.15
LSM3P4-201ENST00000502948 CCT4P50991 539 aaKnown RBP7.84□□□□□ -1.15
LSM3P4-201ENST00000502948 ZNF157P51786 506 aaPredicted RBP7.84□□□□□ -1.15
LSM3P4-201ENST00000502948 SCARF1Q14162 830 aa7.84□□□□□ -1.15
LSM3P4-201ENST00000502948 DCAF8Q5TAQ9 597 aa7.84□□□□□ -1.15
LSM3P4-201ENST00000502948 C15orf52Q6ZUT6 534 aaKnown RBP7.84□□□□□ -1.15
LSM3P4-201ENST00000502948 WWC1Q8IX03 1113 aa7.84□□□□□ -1.15
LSM3P4-201ENST00000502948 PI4KAP1Q8N8J0 262 aa7.84□□□□□ -1.15
LSM3P4-201ENST00000502948 CDCA5Q96FF9 252 aa7.84□□□□□ -1.15
LSM3P4-201ENST00000502948 STK31Q9BXU1 1019 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms