RNA–Protein interactions for RNA: ENST00000501177.7

CRNDE-201, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best) BASIC

Gene CRNDE, Length 614 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-201ENST00000501177 PHLPP1O60346 1717 aa9.49□□□□□ -0.89
CRNDE-201ENST00000501177 PCBP4P57723 403 aaKnown RBP9.49□□□□□ -0.89
CRNDE-201ENST00000501177 SAMD5Q5TGI4 173 aa9.49□□□□□ -0.89
CRNDE-201ENST00000501177 BICDL1Q6ZP65 573 aa9.49□□□□□ -0.89
CRNDE-201ENST00000501177 PLEKHM2Q8IWE5 1019 aa9.49□□□□□ -0.89
CRNDE-201ENST00000501177 TPCN2Q8NHX9 752 aa9.49□□□□□ -0.89
CRNDE-201ENST00000501177 NKTRP30414 1462 aaKnown RBP9.48□□□□□ -0.89
CRNDE-201ENST00000501177 NCOA2Q15596 1464 aa9.48□□□□□ -0.89
CRNDE-201ENST00000501177 EML1O00423 815 aa9.48□□□□□ -0.89
CRNDE-201ENST00000501177 ADH6P28332 368 aa9.48□□□□□ -0.89
CRNDE-201ENST00000501177 FLIIQ13045 1269 aa9.48□□□□□ -0.89
CRNDE-201ENST00000501177 LRRC69Q6ZNQ3 347 aa9.48□□□□□ -0.89
CRNDE-201ENST00000501177 CHSY3Q70JA7 882 aa9.48□□□□□ -0.89
CRNDE-201ENST00000501177 GJA3Q9Y6H8 435 aa9.48□□□□□ -0.89
CRNDE-201ENST00000501177 MROH1Q8NDA8 1641 aa9.48□□□□□ -0.89
CRNDE-201ENST00000501177 MAP3K1Q13233 1512 aa9.47□□□□□ -0.89
CRNDE-201ENST00000501177 NWD1Q149M9 1564 aa9.47□□□□□ -0.89
CRNDE-201ENST00000501177 ZNF468Q5VIY5 522 aaPredicted RBP9.47□□□□□ -0.89
CRNDE-201ENST00000501177 EID1Q9Y6B2 187 aa9.47□□□□□ -0.89
CRNDE-201ENST00000501177 ARHGAP31Q2M1Z3 1444 aa9.47□□□□□ -0.89
CRNDE-201ENST00000501177 PRDM15P57071 1507 aaPredicted RBP9.46□□□□□ -0.89
CRNDE-201ENST00000501177 TSPY4P0CV99 314 aa9.46□□□□□ -0.9
CRNDE-201ENST00000501177 TSPY10P0CW01 314 aa9.46□□□□□ -0.9
CRNDE-201ENST00000501177 CCDC102BQ68D86 513 aa9.46□□□□□ -0.9
CRNDE-201ENST00000501177 TRIM50Q86XT4 487 aa9.46□□□□□ -0.9
CRNDE-201ENST00000501177 TSPAN10Q9H1Z9 355 aaPredicted RBP9.46□□□□□ -0.9
CRNDE-201ENST00000501177 MARK1Q9P0L2 795 aa9.46□□□□□ -0.9
CRNDE-201ENST00000501177 ZNF232Q9UNY5 417 aa9.46□□□□□ -0.9
CRNDE-201ENST00000501177 JCADQ9P266 1359 aa9.46□□□□□ -0.9
CRNDE-201ENST00000501177 PIK3C2BO00750 1634 aa9.45□□□□□ -0.9
CRNDE-201ENST00000501177 GNB5O14775 395 aa9.45□□□□□ -0.9
CRNDE-201ENST00000501177 ATP9BO43861 1147 aa9.45□□□□□ -0.9
CRNDE-201ENST00000501177 DKK1O94907 266 aa9.45□□□□□ -0.9
CRNDE-201ENST00000501177 OGFOD1Q8N543 542 aa9.45□□□□□ -0.9
CRNDE-201ENST00000501177 AVENQ9NQS1 362 aaPredicted RBP9.45□□□□□ -0.9
CRNDE-201ENST00000501177 TMEM94Q12767 1356 aa9.45□□□□□ -0.9
CRNDE-201ENST00000501177 SERTM1A2A2V5 107 aa9.44□□□□□ -0.9
CRNDE-201ENST00000501177 ADAM23O75077 832 aa9.44□□□□□ -0.9
CRNDE-201ENST00000501177 TXNDC2Q86VQ3 553 aa9.44□□□□□ -0.9
CRNDE-201ENST00000501177 CLUAP1Q96AJ1 413 aa9.44□□□□□ -0.9
CRNDE-201ENST00000501177 PRR12Q9ULL5 1215 aa9.44□□□□□ -0.9
CRNDE-201ENST00000501177 FGD6Q6ZV73 1430 aa9.44□□□□□ -0.9
CRNDE-201ENST00000501177 EFCAB6Q5THR3 1501 aa9.44□□□□□ -0.9
CRNDE-201ENST00000501177 DUOX2Q9NRD8 1548 aa9.44□□□□□ -0.9
CRNDE-201ENST00000501177 SHPRHQ149N8 1683 aa9.43□□□□□ -0.9
CRNDE-201ENST00000501177 COL16A1Q07092 1604 aaPredicted RBP9.43□□□□□ -0.9
CRNDE-201ENST00000501177 MSH6P52701 1360 aa9.43□□□□□ -0.9
CRNDE-201ENST00000501177 TMEM2Q9UHN6 1383 aa9.43□□□□□ -0.9
CRNDE-201ENST00000501177 KCNA6P17658 529 aa9.43□□□□□ -0.9
CRNDE-201ENST00000501177 LTKP29376 864 aa9.43□□□□□ -0.9
CRNDE-201ENST00000501177 SFSWAPQ12872 951 aaKnown RBP9.43□□□□□ -0.9
CRNDE-201ENST00000501177 MDFIQ99750 246 aa9.43□□□□□ -0.9
CRNDE-201ENST00000501177 MKRN1Q9UHC7 482 aaKnown RBP9.43□□□□□ -0.9
CRNDE-201ENST00000501177 TET3O43151 1660 aa9.42□□□□□ -0.9
CRNDE-201ENST00000501177 CDK12Q9NYV4 1490 aaPredicted RBP9.42□□□□□ -0.9
CRNDE-201ENST00000501177 SPATA31A6Q5VVP1 1343 aa9.42□□□□□ -0.9
CRNDE-201ENST00000501177 SFI1A8K8P3 1242 aa9.42□□□□□ -0.9
CRNDE-201ENST00000501177 ATP1A2P50993 1020 aa9.42□□□□□ -0.9
CRNDE-201ENST00000501177 LAMC2Q13753 1193 aa9.42□□□□□ -0.9
CRNDE-201ENST00000501177 ZNF772Q68DY9 489 aaPredicted RBP9.42□□□□□ -0.9
CRNDE-201ENST00000501177 ALYREFQ86V81 257 aaKnown RBP9.42□□□□□ -0.9
CRNDE-201ENST00000501177 FNBP4Q8N3X1 1017 aaPredicted RBP9.42□□□□□ -0.9
CRNDE-201ENST00000501177 TSEN2Q8NCE0 465 aaKnown RBP9.42□□□□□ -0.9
CRNDE-201ENST00000501177 HCN4Q9Y3Q4 1203 aa9.42□□□□□ -0.9
CRNDE-201ENST00000501177 C21orf2O43822 256 aa9.41□□□□□ -0.9
CRNDE-201ENST00000501177 BAG6P46379 1132 aa9.41□□□□□ -0.9
CRNDE-201ENST00000501177 SYT9Q86SS6 491 aa9.41□□□□□ -0.9
CRNDE-201ENST00000501177 SIX5Q8N196 739 aa9.41□□□□□ -0.9
CRNDE-201ENST00000501177 TRIM11Q96F44 468 aa9.41□□□□□ -0.9
CRNDE-201ENST00000501177 ZNF594Q96JF6 807 aaPredicted RBP9.41□□□□□ -0.9
CRNDE-201ENST00000501177 HSH2DQ96JZ2 352 aa9.41□□□□□ -0.9
CRNDE-201ENST00000501177 SLC30A3Q99726 388 aa9.41□□□□□ -0.9
CRNDE-201ENST00000501177 ERBINQ96RT1 1412 aa9.4□□□□□ -0.9
CRNDE-201ENST00000501177 CHD2O14647 1828 aaKnown RBP9.4□□□□□ -0.9
CRNDE-201ENST00000501177 C1QTNF9BB2RNN3 333 aa9.4□□□□□ -0.9
CRNDE-201ENST00000501177 PSMA6P60900 246 aaKnown RBP9.4□□□□□ -0.9
CRNDE-201ENST00000501177 CD163Q86VB7 1156 aa9.4□□□□□ -0.9
CRNDE-201ENST00000501177 LARGE2Q8N3Y3 721 aa9.4□□□□□ -0.9
CRNDE-201ENST00000501177 RHPN1Q8TCX5 695 aa9.4□□□□□ -0.9
CRNDE-201ENST00000501177 AHDC1Q5TGY3 1603 aaPredicted RBP9.4□□□□□ -0.9
CRNDE-201ENST00000501177 ADGRB3O60242 1522 aa9.4□□□□□ -0.91
CRNDE-201ENST00000501177 NCOA3Q9Y6Q9 1424 aa9.39□□□□□ -0.91
CRNDE-201ENST00000501177 CROCC2H7BZ55 1655 aa9.39□□□□□ -0.91
CRNDE-201ENST00000501177 PALM3A6NDB9 673 aaPredicted RBP9.39□□□□□ -0.91
CRNDE-201ENST00000501177 CHRNA4P43681 627 aa9.39□□□□□ -0.91
CRNDE-201ENST00000501177 HIRAP54198 1017 aaPredicted RBP9.39□□□□□ -0.91
CRNDE-201ENST00000501177 PROSER2Q86WR7 435 aaPredicted RBP9.39□□□□□ -0.91
CRNDE-201ENST00000501177 GLMNQ92990 594 aa9.39□□□□□ -0.91
CRNDE-201ENST00000501177 PHACTR1Q9C0D0 580 aa9.39□□□□□ -0.91
CRNDE-201ENST00000501177 LRP6O75581 1613 aa9.38□□□□□ -0.91
CRNDE-201ENST00000501177 LMTK2Q8IWU2 1503 aa9.38□□□□□ -0.91
CRNDE-201ENST00000501177 M0R2N6 131 aa9.38□□□□□ -0.91
CRNDE-201ENST00000501177 ZNF280CQ8ND82 737 aa9.38□□□□□ -0.91
CRNDE-201ENST00000501177 TFIP11Q9UBB9 837 aaKnown RBP9.38□□□□□ -0.91
CRNDE-201ENST00000501177 GPC6Q9Y625 555 aaPredicted RBP9.38□□□□□ -0.91
CRNDE-201ENST00000501177 ELOA3CA0A087WX78 387 aaPredicted RBP9.37□□□□□ -0.91
CRNDE-201ENST00000501177 ELOA3DA6NLF2 546 aaPredicted RBP9.37□□□□□ -0.91
CRNDE-201ENST00000501177 FURINP09958 794 aa9.37□□□□□ -0.91
CRNDE-201ENST00000501177 ELOA3BQ3SY89 546 aa9.37□□□□□ -0.91
CRNDE-201ENST00000501177 MEX3CQ5U5Q3 659 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms