RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 ADD1P35611 737 aaKnown RBP8.55□□□□□ -1.04
LYSMD3-203ENST00000500869 NOLC1Q14978 699 aaKnown RBP eCLIP8.55□□□□□ -1.04
LYSMD3-203ENST00000500869 MCMDC2Q4G0Z9 681 aa8.55□□□□□ -1.04
LYSMD3-203ENST00000500869 NUP62CLQ9H1M0 184 aa8.55□□□□□ -1.04
LYSMD3-203ENST00000500869 KCNF1Q9H3M0 494 aa8.55□□□□□ -1.04
LYSMD3-203ENST00000500869 R3HCC1Q9Y3T6 440 aaKnown RBP8.55□□□□□ -1.04
LYSMD3-203ENST00000500869 SYCP1Q15431 976 aa8.55□□□□□ -1.04
LYSMD3-203ENST00000500869 C14orf37Q86TY3 774 aa8.55□□□□□ -1.04
LYSMD3-203ENST00000500869 ZNF496Q96IT1 587 aaPredicted RBP8.55□□□□□ -1.04
LYSMD3-203ENST00000500869 CCDC8Q9H0W5 538 aaPredicted RBP8.55□□□□□ -1.04
LYSMD3-203ENST00000500869 COL9A3Q14050 684 aaPredicted RBP8.55□□□□□ -1.04
LYSMD3-203ENST00000500869 ZMYM1Q5SVZ6 1142 aa8.55□□□□□ -1.04
LYSMD3-203ENST00000500869 COPS6Q7L5N1 327 aa8.55□□□□□ -1.04
LYSMD3-203ENST00000500869 ATG9AQ7Z3C6 839 aa8.55□□□□□ -1.04
LYSMD3-203ENST00000500869 RAPGEF4Q8WZA2 1011 aa8.55□□□□□ -1.04
LYSMD3-203ENST00000500869 NEK1Q96PY6 1258 aa8.55□□□□□ -1.04
LYSMD3-203ENST00000500869 TAF6LQ9Y6J9 622 aa8.55□□□□□ -1.04
LYSMD3-203ENST00000500869 CARMIL3Q8ND23 1372 aa8.55□□□□□ -1.04
LYSMD3-203ENST00000500869 CYP27B1O15528 508 aa8.54□□□□□ -1.04
LYSMD3-203ENST00000500869 TYRO3Q06418 890 aa8.54□□□□□ -1.04
LYSMD3-203ENST00000500869 MYD88Q99836 296 aa8.54□□□□□ -1.04
LYSMD3-203ENST00000500869 COL5A2P05997 1499 aaPredicted RBP8.54□□□□□ -1.04
LYSMD3-203ENST00000500869 ITGB4P16144 1822 aa8.54□□□□□ -1.04
LYSMD3-203ENST00000500869 PLA2G12BQ9BX93 195 aa8.54□□□□□ -1.04
LYSMD3-203ENST00000500869 BOLA2Q9H3K6 86 aa8.54□□□□□ -1.04
LYSMD3-203ENST00000500869 RCOR1Q9UKL0 485 aa8.54□□□□□ -1.04
LYSMD3-203ENST00000500869 CTAGE5O15320 804 aa8.54□□□□□ -1.04
LYSMD3-203ENST00000500869 LIG1P18858 919 aa8.54□□□□□ -1.04
LYSMD3-203ENST00000500869 TFCP2Q12800 502 aa8.54□□□□□ -1.04
LYSMD3-203ENST00000500869 GIMAP6Q6P9H5 292 aa8.54□□□□□ -1.04
LYSMD3-203ENST00000500869 NECAB1Q8N987 351 aa8.54□□□□□ -1.04
LYSMD3-203ENST00000500869 ZNF274Q96GC6 653 aaPredicted RBP8.54□□□□□ -1.04
LYSMD3-203ENST00000500869 SPATA31A3Q5VYP0 1347 aa8.54□□□□□ -1.04
LYSMD3-203ENST00000500869 GOLGA6L6A8MZA4 724 aa8.54□□□□□ -1.04
LYSMD3-203ENST00000500869 CYP21A2P08686 494 aa8.54□□□□□ -1.04
LYSMD3-203ENST00000500869 PGBD1Q96JS3 809 aa8.54□□□□□ -1.04
LYSMD3-203ENST00000500869 BCORQ6W2J9 1755 aa8.53□□□□□ -1.04
LYSMD3-203ENST00000500869 ERVV-2B6SEH9 535 aa8.53□□□□□ -1.04
LYSMD3-203ENST00000500869 CTIFO43310 598 aaKnown RBP8.53□□□□□ -1.04
LYSMD3-203ENST00000500869 STOX1Q6ZVD7 989 aa8.53□□□□□ -1.04
LYSMD3-203ENST00000500869 NSUN7Q8NE18 718 aaKnown RBP8.53□□□□□ -1.04
LYSMD3-203ENST00000500869 A0A1B0GUL6 1792 aa8.53□□□□□ -1.04
LYSMD3-203ENST00000500869 VPS37CA5D8V6 355 aaPredicted RBP8.53□□□□□ -1.04
LYSMD3-203ENST00000500869 IL15P40933 162 aaPredicted RBP8.53□□□□□ -1.04
LYSMD3-203ENST00000500869 DHX32Q7L7V1 743 aaKnown RBP8.53□□□□□ -1.04
LYSMD3-203ENST00000500869 SPATA32Q96LK8 384 aa8.53□□□□□ -1.04
LYSMD3-203ENST00000500869 CFAP45Q9UL16 551 aa8.53□□□□□ -1.04
LYSMD3-203ENST00000500869 NID2Q14112 1375 aa8.52□□□□□ -1.04
LYSMD3-203ENST00000500869 CHD4Q14839 1912 aa8.52□□□□□ -1.05
LYSMD3-203ENST00000500869 PTMAP06454 111 aaKnown RBP8.52□□□□□ -1.05
LYSMD3-203ENST00000500869 TRIM28Q13263 835 aaKnown RBP8.52□□□□□ -1.05
LYSMD3-203ENST00000500869 NFATC2IPQ8NCF5 419 aa8.52□□□□□ -1.05
LYSMD3-203ENST00000500869 CCDC191Q8NCU4 936 aa8.52□□□□□ -1.05
LYSMD3-203ENST00000500869 ZNF512BQ96KM6 892 aaPredicted RBP8.52□□□□□ -1.05
LYSMD3-203ENST00000500869 PCDH11XQ9BZA7 1347 aa8.52□□□□□ -1.05
LYSMD3-203ENST00000500869 PCDH11YQ9BZA8 1340 aa8.52□□□□□ -1.05
LYSMD3-203ENST00000500869 CTDNEP1O95476 244 aa8.52□□□□□ -1.05
LYSMD3-203ENST00000500869 SCRN1Q12765 414 aa8.52□□□□□ -1.05
LYSMD3-203ENST00000500869 ENGASEQ8NFI3 743 aa8.52□□□□□ -1.05
LYSMD3-203ENST00000500869 CBX8Q9HC52 389 aa8.52□□□□□ -1.05
LYSMD3-203ENST00000500869 USP16Q9Y5T5 823 aa8.52□□□□□ -1.05
LYSMD3-203ENST00000500869 ZNF831Q5JPB2 1677 aa8.52□□□□□ -1.05
LYSMD3-203ENST00000500869 RIC1Q4ADV7 1423 aa8.52□□□□□ -1.05
LYSMD3-203ENST00000500869 ZNF75DP51815 510 aa8.52□□□□□ -1.05
LYSMD3-203ENST00000500869 IQCB1Q15051 598 aa8.52□□□□□ -1.05
LYSMD3-203ENST00000500869 MRFAP1L1Q96HT8 127 aa8.52□□□□□ -1.05
LYSMD3-203ENST00000500869 BPIFA3Q9BQP9 254 aa8.52□□□□□ -1.05
LYSMD3-203ENST00000500869 DBNDD2Q9BQY9 259 aa8.52□□□□□ -1.05
LYSMD3-203ENST00000500869 KIF3AQ9Y496 699 aa8.52□□□□□ -1.05
LYSMD3-203ENST00000500869 PHLPP1O60346 1717 aa8.51□□□□□ -1.05
LYSMD3-203ENST00000500869 NBPF26B4DH59 902 aa8.51□□□□□ -1.05
LYSMD3-203ENST00000500869 KCNJ4P48050 445 aa8.51□□□□□ -1.05
LYSMD3-203ENST00000500869 NBPF14Q5TI25 921 aa8.51□□□□□ -1.05
LYSMD3-203ENST00000500869 NBPF10Q6P3W6 841 aaKnown RBP8.51□□□□□ -1.05
LYSMD3-203ENST00000500869 Q6ZUG5 572 aa8.51□□□□□ -1.05
LYSMD3-203ENST00000500869 NBPF15Q8N660 670 aa8.51□□□□□ -1.05
LYSMD3-203ENST00000500869 LARP6Q9BRS8 491 aaKnown RBP8.51□□□□□ -1.05
LYSMD3-203ENST00000500869 ISCA1Q9BUE6 129 aa8.51□□□□□ -1.05
LYSMD3-203ENST00000500869 DLEC1Q9Y238 1755 aa8.51□□□□□ -1.05
LYSMD3-203ENST00000500869 SLC39A6Q13433 755 aa8.51□□□□□ -1.05
LYSMD3-203ENST00000500869 ANKRD7Q92527 254 aa8.51□□□□□ -1.05
LYSMD3-203ENST00000500869 BRF1Q92994 677 aa8.51□□□□□ -1.05
LYSMD3-203ENST00000500869 TNMDQ9H2S6 317 aa8.51□□□□□ -1.05
LYSMD3-203ENST00000500869 ZMYM6O95789 1325 aa8.51□□□□□ -1.05
LYSMD3-203ENST00000500869 A0A1W2PQ27 194 aa8.51□□□□□ -1.05
LYSMD3-203ENST00000500869 A0A1W2PQ64 194 aa8.51□□□□□ -1.05
LYSMD3-203ENST00000500869 A0A1W2PQD8 194 aa8.51□□□□□ -1.05
LYSMD3-203ENST00000500869 TTC5Q8N0Z6 440 aa8.51□□□□□ -1.05
LYSMD3-203ENST00000500869 KLHDC4Q8TBB5 520 aa8.51□□□□□ -1.05
LYSMD3-203ENST00000500869 PAG1Q9NWQ8 432 aa8.51□□□□□ -1.05
LYSMD3-203ENST00000500869 DACT1Q9NYF0 836 aa8.51□□□□□ -1.05
LYSMD3-203ENST00000500869 WDR17Q8IZU2 1322 aa8.5□□□□□ -1.05
LYSMD3-203ENST00000500869 EYA2O00167 538 aa8.5□□□□□ -1.05
LYSMD3-203ENST00000500869 NEMFO60524 1076 aa8.5□□□□□ -1.05
LYSMD3-203ENST00000500869 RBM6P78332 1123 aaKnown RBP8.5□□□□□ -1.05
LYSMD3-203ENST00000500869 MAST3O60307 1309 aa8.5□□□□□ -1.05
LYSMD3-203ENST00000500869 CDHR2Q9BYE9 1310 aa8.5□□□□□ -1.05
LYSMD3-203ENST00000500869 ZFYP08048 801 aaPredicted RBP8.5□□□□□ -1.05
LYSMD3-203ENST00000500869 AIMP1Q12904 312 aaKnown RBP8.5□□□□□ -1.05
LYSMD3-203ENST00000500869 SNW1Q13573 536 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms