RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 CACNA1FO60840 1977 aa10.72□□□□□ -0.69
FN1-227ENST00000498719 QPCTQ16769 361 aa10.72□□□□□ -0.69
FN1-227ENST00000498719 SKOR2Q2VWA4 1001 aaPredicted RBP10.72□□□□□ -0.69
FN1-227ENST00000498719 UNC5CLQ8IV45 518 aa10.72□□□□□ -0.69
FN1-227ENST00000498719 RILPL2Q969X0 211 aa10.72□□□□□ -0.69
FN1-227ENST00000498719 MAP3K5Q99683 1374 aa10.71□□□□□ -0.69
FN1-227ENST00000498719 ST18O60284 1047 aa10.71□□□□□ -0.69
FN1-227ENST00000498719 MX1P20591 662 aa10.71□□□□□ -0.69
FN1-227ENST00000498719 HSD3B2P26439 372 aa10.71□□□□□ -0.69
FN1-227ENST00000498719 TRIM34Q9BYJ4 488 aa10.71□□□□□ -0.69
FN1-227ENST00000498719 USP44Q9H0E7 712 aa10.71□□□□□ -0.69
FN1-227ENST00000498719 IL1RAPL2Q9NP60 686 aa10.71□□□□□ -0.69
FN1-227ENST00000498719 MAP3K20Q9NYL2 800 aaKnown RBP10.71□□□□□ -0.69
FN1-227ENST00000498719 PALD1Q9ULE6 856 aa10.71□□□□□ -0.69
FN1-227ENST00000498719 CFAP69A5D8W1 941 aa10.7□□□□□ -0.7
FN1-227ENST00000498719 TRIM6-TRIM34B2RNG4 842 aa10.7□□□□□ -0.7
FN1-227ENST00000498719 GOLGA6L22H0YM25 854 aa10.7□□□□□ -0.7
FN1-227ENST00000498719 CYP2E1P05181 493 aaPredicted RBP10.7□□□□□ -0.7
FN1-227ENST00000498719 GNAI3P08754 354 aa10.7□□□□□ -0.7
FN1-227ENST00000498719 ATP8B2P98198 1209 aa10.7□□□□□ -0.7
FN1-227ENST00000498719 TAF7Q15545 349 aaPredicted RBP10.7□□□□□ -0.7
FN1-227ENST00000498719 CLEC17AQ6ZS10 378 aa10.7□□□□□ -0.7
FN1-227ENST00000498719 THEMISQ8N1K5 641 aaPredicted RBP10.7□□□□□ -0.7
FN1-227ENST00000498719 IPO4Q8TEX9 1081 aaKnown RBP10.7□□□□□ -0.7
FN1-227ENST00000498719 FAM161BQ96MY7 647 aa10.7□□□□□ -0.7
FN1-227ENST00000498719 CREBZFQ9NS37 354 aa10.7□□□□□ -0.7
FN1-227ENST00000498719 NOVA2Q9UNW9 492 aaKnown RBP10.7□□□□□ -0.7
FN1-227ENST00000498719 PPP1R3GB7ZBB8 358 aa10.7□□□□□ -0.7
FN1-227ENST00000498719 HTATSF1O43719 755 aaKnown RBP10.7□□□□□ -0.7
FN1-227ENST00000498719 EIF2S2P20042 333 aaKnown RBP10.7□□□□□ -0.7
FN1-227ENST00000498719 NEK4P51957 841 aa10.7□□□□□ -0.7
FN1-227ENST00000498719 CSPP1Q1MSJ5 1256 aa10.7□□□□□ -0.7
FN1-227ENST00000498719 ZNF710Q8N1W2 664 aa10.7□□□□□ -0.7
FN1-227ENST00000498719 IL17RAQ96F46 866 aa10.7□□□□□ -0.7
FN1-227ENST00000498719 IL25Q9H293 177 aa10.7□□□□□ -0.7
FN1-227ENST00000498719 TTF2Q9UNY4 1162 aaKnown RBP10.7□□□□□ -0.7
FN1-227ENST00000498719 ZDHHC9Q9Y397 364 aa10.7□□□□□ -0.7
FN1-227ENST00000498719 IBTKQ9P2D0 1353 aaPredicted RBP10.7□□□□□ -0.7
FN1-227ENST00000498719 LTN1O94822 1766 aa10.7□□□□□ -0.7
FN1-227ENST00000498719 SDR16C5Q8N3Y7 309 aa10.69□□□□□ -0.7
FN1-227ENST00000498719 SLC43A3Q8NBI5 491 aa10.69□□□□□ -0.7
FN1-227ENST00000498719 ESYT1Q9BSJ8 1104 aa10.69□□□□□ -0.7
FN1-227ENST00000498719 LGR6Q9HBX8 967 aa10.69□□□□□ -0.7
FN1-227ENST00000498719 FER1L4A9Z1Z3 1794 aa10.69□□□□□ -0.7
FN1-227ENST00000498719 ERBB4Q15303 1308 aa10.69□□□□□ -0.7
FN1-227ENST00000498719 SOCS7O14512 581 aa10.69□□□□□ -0.7
FN1-227ENST00000498719 CAPN15O75808 1086 aa10.69□□□□□ -0.7
FN1-227ENST00000498719 ANXA1P04083 346 aa10.69□□□□□ -0.7
FN1-227ENST00000498719 USP17L8P0C7I0 530 aa10.69□□□□□ -0.7
FN1-227ENST00000498719 NUCB2P80303 420 aa10.69□□□□□ -0.7
FN1-227ENST00000498719 AMPD3Q01432 767 aa10.69□□□□□ -0.7
FN1-227ENST00000498719 ELOAQ14241 798 aaKnown RBP10.69□□□□□ -0.7
FN1-227ENST00000498719 KLHL40Q2TBA0 621 aa10.69□□□□□ -0.7
FN1-227ENST00000498719 NUTM1Q86Y26 1132 aa10.69□□□□□ -0.7
FN1-227ENST00000498719 RAVER1Q8IY67 606 aaKnown RBP10.69□□□□□ -0.7
FN1-227ENST00000498719 CACTIN-AS1Q8N1I8 211 aa10.69□□□□□ -0.7
FN1-227ENST00000498719 OSBPL2Q9H1P3 480 aa10.69□□□□□ -0.7
FN1-227ENST00000498719 ANO2Q9NQ90 1003 aa10.69□□□□□ -0.7
FN1-227ENST00000498719 RGPD2P0DJD1 1756 aa10.68□□□□□ -0.7
FN1-227ENST00000498719 KCNQ3O43525 872 aa10.68□□□□□ -0.7
FN1-227ENST00000498719 UBTFL1P0CB47 393 aaPredicted RBP10.68□□□□□ -0.7
FN1-227ENST00000498719 WASHC4Q2M389 1173 aa10.68□□□□□ -0.7
FN1-227ENST00000498719 NBPF6Q5VWK0 638 aa10.68□□□□□ -0.7
FN1-227ENST00000498719 CAVIN1Q6NZI2 390 aaKnown RBP10.68□□□□□ -0.7
FN1-227ENST00000498719 SCYL1Q96KG9 808 aa10.68□□□□□ -0.7
FN1-227ENST00000498719 NBPF4Q96M43 638 aa10.68□□□□□ -0.7
FN1-227ENST00000498719 QTRT2Q9H974 415 aaKnown RBP10.68□□□□□ -0.7
FN1-227ENST00000498719 LMBRD1Q9NUN5 540 aa10.68□□□□□ -0.7
FN1-227ENST00000498719 PRC1O43663 620 aa10.68□□□□□ -0.7
FN1-227ENST00000498719 LIG1P18858 919 aa10.68□□□□□ -0.7
FN1-227ENST00000498719 CHMLP26374 656 aa10.68□□□□□ -0.7
FN1-227ENST00000498719 CBLBQ13191 982 aa10.68□□□□□ -0.7
FN1-227ENST00000498719 SLFNL1Q499Z3 407 aa10.68□□□□□ -0.7
FN1-227ENST00000498719 TMX3Q96JJ7 454 aa10.68□□□□□ -0.7
FN1-227ENST00000498719 HMX1Q9NP08 348 aaPredicted RBP10.68□□□□□ -0.7
FN1-227ENST00000498719 PRPF40AO75400 957 aaKnown RBP10.67□□□□□ -0.7
FN1-227ENST00000498719 SENP7Q9BQF6 1050 aa10.67□□□□□ -0.7
FN1-227ENST00000498719 ISY1Q9ULR0 285 aaKnown RBP10.67□□□□□ -0.7
FN1-227ENST00000498719 NDUFB9Q9Y6M9 179 aa10.67□□□□□ -0.7
FN1-227ENST00000498719 NBPF7P0C2Y1 421 aaPredicted RBP10.67□□□□□ -0.7
FN1-227ENST00000498719 PPP1R42Q7Z4L9 355 aa10.67□□□□□ -0.7
FN1-227ENST00000498719 TSC1Q92574 1164 aa10.67□□□□□ -0.7
FN1-227ENST00000498719 LRRC59Q96AG4 307 aaKnown RBP10.67□□□□□ -0.7
FN1-227ENST00000498719 UPF3BQ9BZI7 483 aaKnown RBP10.67□□□□□ -0.7
FN1-227ENST00000498719 ANKARQ7Z5J8 1434 aa10.66□□□□□ -0.7
FN1-227ENST00000498719 ZNF512BQ96KM6 892 aaPredicted RBP10.66□□□□□ -0.7
FN1-227ENST00000498719 ARHGEF10LQ9HCE6 1279 aa10.66□□□□□ -0.7
FN1-227ENST00000498719 BSDC1Q9NW68 430 aaPredicted RBP10.66□□□□□ -0.7
FN1-227ENST00000498719 N4BP2Q86UW6 1770 aaPredicted RBP10.66□□□□□ -0.7
FN1-227ENST00000498719 SURF6O75683 361 aaKnown RBP10.66□□□□□ -0.7
FN1-227ENST00000498719 STK10O94804 968 aaKnown RBP10.66□□□□□ -0.7
FN1-227ENST00000498719 ENOX2Q16206 610 aaKnown RBP10.66□□□□□ -0.7
FN1-227ENST00000498719 ZNF280DQ6N043 979 aa10.66□□□□□ -0.7
FN1-227ENST00000498719 GPT2Q8TD30 523 aa10.66□□□□□ -0.7
FN1-227ENST00000498719 SFMBT1Q9UHJ3 866 aa10.66□□□□□ -0.7
FN1-227ENST00000498719 THRAP3Q9Y2W1 955 aaKnown RBP10.66□□□□□ -0.7
FN1-227ENST00000498719 SOS1Q07889 1333 aaPredicted RBP10.65□□□□□ -0.7
FN1-227ENST00000498719 PI4KAP2A4QPH2 592 aa10.65□□□□□ -0.7
FN1-227ENST00000498719 PI4KAP1Q8N8J0 262 aa10.65□□□□□ -0.7
FN1-227ENST00000498719 SSH3Q8TE77 659 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms