RNA–Protein interactions for RNA: ENST00000498550.5

PDS5B-209, Transcript of PDS5 cohesin associated factor B, humanhuman

TSL 1 (best)

Gene PDS5B, Length 4,238 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5B-209ENST00000498550 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.32□□□□□ -1.72
PDS5B-209ENST00000498550 E2F4Q16254 413 aa4.32□□□□□ -1.72
PDS5B-209ENST00000498550 LDHDQ86WU2 507 aa4.32□□□□□ -1.72
PDS5B-209ENST00000498550 PIGBQ92521 554 aa4.32□□□□□ -1.72
PDS5B-209ENST00000498550 PNNQ9H307 717 aaKnown RBP4.32□□□□□ -1.72
PDS5B-209ENST00000498550 TAOK2Q9UL54 1235 aa4.32□□□□□ -1.72
PDS5B-209ENST00000498550 ADAMTS8Q9UP79 889 aa4.32□□□□□ -1.72
PDS5B-209ENST00000498550 WDR33Q9C0J8 1336 aaKnown RBP4.32□□□□□ -1.72
PDS5B-209ENST00000498550 DPEP1P16444 411 aa4.32□□□□□ -1.72
PDS5B-209ENST00000498550 MVPQ14764 893 aaKnown RBP4.32□□□□□ -1.72
PDS5B-209ENST00000498550 DCAF11Q8TEB1 546 aa4.32□□□□□ -1.72
PDS5B-209ENST00000498550 ARMC5Q96C12 935 aa4.32□□□□□ -1.72
PDS5B-209ENST00000498550 ADGRG1Q9Y653 693 aa4.32□□□□□ -1.72
PDS5B-209ENST00000498550 IGSF3O75054 1194 aa4.31□□□□□ -1.72
PDS5B-209ENST00000498550 FLT4P35916 1363 aa4.31□□□□□ -1.72
PDS5B-209ENST00000498550 ARSIQ5FYB1 569 aa4.31□□□□□ -1.72
PDS5B-209ENST00000498550 C9orf131Q5VYM1 1079 aa4.31□□□□□ -1.72
PDS5B-209ENST00000498550 VPS33BQ9H267 617 aa4.31□□□□□ -1.72
PDS5B-209ENST00000498550 IGSF5Q9NSI5 407 aa4.31□□□□□ -1.72
PDS5B-209ENST00000498550 HMGB2P26583 209 aaKnown RBP4.31□□□□□ -1.72
PDS5B-209ENST00000498550 TAF1DQ9H5J8 278 aaPredicted RBP4.31□□□□□ -1.72
PDS5B-209ENST00000498550 DOCK5Q9H7D0 1870 aa4.31□□□□□ -1.72
PDS5B-209ENST00000498550 PDIA4P13667 645 aaKnown RBP4.3□□□□□ -1.72
PDS5B-209ENST00000498550 BMP8BP34820 402 aa4.3□□□□□ -1.72
PDS5B-209ENST00000498550 FAM43AQ8N2R8 423 aa4.3□□□□□ -1.72
PDS5B-209ENST00000498550 DNAH12Q6ZR08 3092 aa4.3□□□□□ -1.72
PDS5B-209ENST00000498550 CA12O43570 354 aa4.3□□□□□ -1.72
PDS5B-209ENST00000498550 CUL4AQ13619 759 aa4.3□□□□□ -1.72
PDS5B-209ENST00000498550 MRPL50Q8N5N7 158 aaKnown RBP4.3□□□□□ -1.72
PDS5B-209ENST00000498550 MINK1Q8N4C8 1332 aaPredicted RBP4.3□□□□□ -1.72
PDS5B-209ENST00000498550 LCTP09848 1927 aa4.3□□□□□ -1.72
PDS5B-209ENST00000498550 RPS6KA4O75676 772 aa4.3□□□□□ -1.72
PDS5B-209ENST00000498550 SCNN1DP51172 638 aa4.3□□□□□ -1.72
PDS5B-209ENST00000498550 CALD1Q05682 793 aaKnown RBP4.3□□□□□ -1.72
PDS5B-209ENST00000498550 CNGB1Q14028 1251 aaPredicted RBP4.3□□□□□ -1.72
PDS5B-209ENST00000498550 CLUAP1Q96AJ1 413 aa4.3□□□□□ -1.72
PDS5B-209ENST00000498550 GCC1Q96CN9 775 aa4.3□□□□□ -1.72
PDS5B-209ENST00000498550 ZBED3Q96IU2 234 aaPredicted RBP4.3□□□□□ -1.72
PDS5B-209ENST00000498550 FANCMQ8IYD8 2048 aa4.3□□□□□ -1.72
PDS5B-209ENST00000498550 EVI5O60447 810 aa4.29□□□□□ -1.72
PDS5B-209ENST00000498550 GTF2E1P29083 439 aaPredicted RBP4.29□□□□□ -1.72
PDS5B-209ENST00000498550 HNRNPUQ00839 825 aaKnown RBP eCLIP4.29□□□□□ -1.72
PDS5B-209ENST00000498550 FYB1O15117 783 aa4.29□□□□□ -1.72
PDS5B-209ENST00000498550 ZNF445P59923 1031 aa4.29□□□□□ -1.72
PDS5B-209ENST00000498550 TSGA10IPQ3SY00 556 aa4.29□□□□□ -1.72
PDS5B-209ENST00000498550 SAPCD2Q86UD0 394 aa4.29□□□□□ -1.72
PDS5B-209ENST00000498550 PXYLP1Q8TE99 480 aa4.29□□□□□ -1.72
PDS5B-209ENST00000498550 CHMP4BQ9H444 224 aaKnown RBP4.29□□□□□ -1.72
PDS5B-209ENST00000498550 CHL1O00533 1208 aa4.29□□□□□ -1.72
PDS5B-209ENST00000498550 ZBTB7BO15156 539 aaPredicted RBP4.29□□□□□ -1.72
PDS5B-209ENST00000498550 RGS20O76081 388 aa4.29□□□□□ -1.72
PDS5B-209ENST00000498550 LMNB1P20700 586 aa4.29□□□□□ -1.72
PDS5B-209ENST00000498550 LCE2CQ5TA81 110 aa4.29□□□□□ -1.72
PDS5B-209ENST00000498550 RBM43Q6ZSC3 357 aaKnown RBP4.29□□□□□ -1.72
PDS5B-209ENST00000498550 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.29□□□□□ -1.72
PDS5B-209ENST00000498550 DENND4AQ7Z401 1863 aa4.29□□□□□ -1.72
PDS5B-209ENST00000498550 NAV1Q8NEY1 1877 aa4.29□□□□□ -1.72
PDS5B-209ENST00000498550 COL4A3Q01955 1670 aa4.29□□□□□ -1.72
PDS5B-209ENST00000498550 PCDH11XQ9BZA7 1347 aa4.29□□□□□ -1.72
PDS5B-209ENST00000498550 PCDH11YQ9BZA8 1340 aa4.29□□□□□ -1.72
PDS5B-209ENST00000498550 GTF2F1P35269 517 aaKnown RBP eCLIP4.29□□□□□ -1.72
PDS5B-209ENST00000498550 FAM109BQ6ICB4 259 aaPredicted RBP4.29□□□□□ -1.72
PDS5B-209ENST00000498550 PSMD1Q99460 953 aa4.29□□□□□ -1.72
PDS5B-209ENST00000498550 LBX1P52954 281 aa4.28□□□□□ -1.72
PDS5B-209ENST00000498550 ANAPC15P60006 121 aa4.28□□□□□ -1.72
PDS5B-209ENST00000498550 RAB3GAP1Q15042 981 aa4.28□□□□□ -1.72
PDS5B-209ENST00000498550 NBPF6Q5VWK0 638 aa4.28□□□□□ -1.72
PDS5B-209ENST00000498550 SHISA4Q96DD7 197 aa4.28□□□□□ -1.72
PDS5B-209ENST00000498550 NBPF4Q96M43 638 aa4.28□□□□□ -1.72
PDS5B-209ENST00000498550 RRAGCQ9HB90 399 aa4.28□□□□□ -1.72
PDS5B-209ENST00000498550 FAM53CQ9NYF3 392 aa4.28□□□□□ -1.72
PDS5B-209ENST00000498550 ZNF541Q9H0D2 1346 aa4.28□□□□□ -1.72
PDS5B-209ENST00000498550 HS3ST6Q96QI5 342 aa4.28□□□□□ -1.72
PDS5B-209ENST00000498550 CHIC2Q9UKJ5 165 aa4.28□□□□□ -1.72
PDS5B-209ENST00000498550 TCHHQ07283 1943 aa4.28□□□□□ -1.72
PDS5B-209ENST00000498550 TMEM88BA6NKF7 163 aa4.28□□□□□ -1.72
PDS5B-209ENST00000498550 DKK1O94907 266 aa4.28□□□□□ -1.72
PDS5B-209ENST00000498550 TM4SF4P48230 202 aa4.28□□□□□ -1.72
PDS5B-209ENST00000498550 STYK1Q6J9G0 422 aa4.28□□□□□ -1.72
PDS5B-209ENST00000498550 BCL11AQ9H165 835 aa4.28□□□□□ -1.72
PDS5B-209ENST00000498550 VPS9D1Q9Y2B5 631 aa4.28□□□□□ -1.72
PDS5B-209ENST00000498550 EXOC5O00471 708 aa4.27□□□□□ -1.73
PDS5B-209ENST00000498550 EXOC6Q8TAG9 804 aa4.27□□□□□ -1.73
PDS5B-209ENST00000498550 LARP6Q9BRS8 491 aaKnown RBP4.27□□□□□ -1.73
PDS5B-209ENST00000498550 PDZRN3Q9UPQ7 1066 aa4.27□□□□□ -1.73
PDS5B-209ENST00000498550 SPEGQ15772 3267 aa4.27□□□□□ -1.73
PDS5B-209ENST00000498550 MYH4Q9Y623 1939 aa4.27□□□□□ -1.73
PDS5B-209ENST00000498550 RALGAPA2Q2PPJ7 1873 aa4.27□□□□□ -1.73
PDS5B-209ENST00000498550 SMYD5Q6GMV2 418 aa4.27□□□□□ -1.73
PDS5B-209ENST00000498550 ELOA2Q8IYF1 753 aaPredicted RBP4.27□□□□□ -1.73
PDS5B-209ENST00000498550 ZMYM6O95789 1325 aa4.27□□□□□ -1.73
PDS5B-209ENST00000498550 RTL9Q8NET4 1388 aa4.27□□□□□ -1.73
PDS5B-209ENST00000498550 VEGFAP15692 232 aaPredicted RBP4.27□□□□□ -1.73
PDS5B-209ENST00000498550 CRBNQ96SW2 442 aa4.27□□□□□ -1.73
PDS5B-209ENST00000498550 MYH16Q9H6N6 1097 aa4.27□□□□□ -1.73
PDS5B-209ENST00000498550 PPP1R1BQ9UD71 204 aaPredicted RBP4.27□□□□□ -1.73
PDS5B-209ENST00000498550 COL4A2P08572 1712 aa4.26□□□□□ -1.73
PDS5B-209ENST00000498550 POLD1P28340 1107 aa4.26□□□□□ -1.73
PDS5B-209ENST00000498550 HOXA10P31260 410 aaPredicted RBP4.26□□□□□ -1.73
PDS5B-209ENST00000498550 MAP2K1Q02750 393 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms