RNA–Protein interactions for RNA: ENST00000498530.5

PMPCB-208, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-208ENST00000498530 EGFLAMQ63HQ2 1017 aa8.88□□□□□ -0.99
PMPCB-208ENST00000498530 PRPF40BQ6NWY9 871 aaKnown RBP8.88□□□□□ -0.99
PMPCB-208ENST00000498530 NLGN1Q8N2Q7 840 aa8.88□□□□□ -0.99
PMPCB-208ENST00000498530 C3orf58Q8NDZ4 430 aa8.88□□□□□ -0.99
PMPCB-208ENST00000498530 GLIS3Q8NEA6 775 aa8.88□□□□□ -0.99
PMPCB-208ENST00000498530 ABI2Q9NYB9 513 aaPredicted RBP8.88□□□□□ -0.99
PMPCB-208ENST00000498530 NXF1Q9UBU9 619 aaKnown RBP8.88□□□□□ -0.99
PMPCB-208ENST00000498530 TRAK1Q9UPV9 953 aa8.88□□□□□ -0.99
PMPCB-208ENST00000498530 USP20Q9Y2K6 914 aa8.88□□□□□ -0.99
PMPCB-208ENST00000498530 A0A1B0GTH6 734 aa8.87□□□□□ -0.99
PMPCB-208ENST00000498530 GADD45BO75293 160 aaPredicted RBP8.87□□□□□ -0.99
PMPCB-208ENST00000498530 ZNF662Q6ZS27 426 aa8.87□□□□□ -0.99
PMPCB-208ENST00000498530 KIAA0825Q8IV33 1275 aa8.87□□□□□ -0.99
PMPCB-208ENST00000498530 CKAP2LQ8IYA6 745 aa8.87□□□□□ -0.99
PMPCB-208ENST00000498530 C1orf127Q8N9H9 656 aa8.87□□□□□ -0.99
PMPCB-208ENST00000498530 SPON2Q9BUD6 331 aa8.87□□□□□ -0.99
PMPCB-208ENST00000498530 XYLBO75191 536 aa8.86□□□□□ -0.99
PMPCB-208ENST00000498530 NLRP13Q86W25 1043 aa8.86□□□□□ -0.99
PMPCB-208ENST00000498530 MKL1Q969V6 931 aa8.86□□□□□ -0.99
PMPCB-208ENST00000498530 KCNQ5Q9NR82 932 aa8.86□□□□□ -0.99
PMPCB-208ENST00000498530 CNTN3Q9P232 1028 aa8.86□□□□□ -0.99
PMPCB-208ENST00000498530 STRIP2Q9ULQ0 834 aa8.86□□□□□ -0.99
PMPCB-208ENST00000498530 POLR3DP05423 398 aaPredicted RBP8.85□□□□□ -0.99
PMPCB-208ENST00000498530 RLBP1P12271 317 aa8.85□□□□□ -0.99
PMPCB-208ENST00000498530 PHKA2P46019 1235 aa8.85□□□□□ -0.99
PMPCB-208ENST00000498530 LRRC69Q6ZNQ3 347 aa8.85□□□□□ -0.99
PMPCB-208ENST00000498530 LINC00528Q8N1L1 170 aa8.85□□□□□ -0.99
PMPCB-208ENST00000498530 RNF217Q8TC41 542 aa8.85□□□□□ -0.99
PMPCB-208ENST00000498530 NEUROD4Q9HD90 331 aa8.85□□□□□ -0.99
PMPCB-208ENST00000498530 POLMQ9NP87 494 aaPredicted RBP8.85□□□□□ -0.99
PMPCB-208ENST00000498530 TTF2Q9UNY4 1162 aaKnown RBP8.85□□□□□ -0.99
PMPCB-208ENST00000498530 XRCC5P13010 732 aaKnown RBP8.84□□□□□ -0.99
PMPCB-208ENST00000498530 EDN3P14138 238 aa8.84□□□□□ -0.99
PMPCB-208ENST00000498530 MAP3K10Q02779 954 aa8.84□□□□□ -0.99
PMPCB-208ENST00000498530 COL9A2Q14055 689 aaPredicted RBP8.84□□□□□ -0.99
PMPCB-208ENST00000498530 SAMD5Q5TGI4 173 aa8.84□□□□□ -0.99
PMPCB-208ENST00000498530 JAZF1Q86VZ6 243 aa8.84□□□□□ -0.99
PMPCB-208ENST00000498530 IRF7Q92985 503 aa8.84□□□□□ -0.99
PMPCB-208ENST00000498530 CRISPLD1Q9H336 500 aa8.84□□□□□ -0.99
PMPCB-208ENST00000498530 PPP4R2Q9NY27 417 aa8.84□□□□□ -0.99
PMPCB-208ENST00000498530 ADAMTS1Q9UHI8 967 aa8.84□□□□□ -0.99
PMPCB-208ENST00000498530 MSX1P28360 303 aa8.83□□□□□ -1
PMPCB-208ENST00000498530 CTSOP43234 321 aaPredicted RBP8.83□□□□□ -1
PMPCB-208ENST00000498530 POU4F2Q12837 409 aa8.83□□□□□ -1
PMPCB-208ENST00000498530 BMS1Q14692 1282 aaKnown RBP8.83□□□□□ -1
PMPCB-208ENST00000498530 NPAS3Q8IXF0 933 aa8.83□□□□□ -1
PMPCB-208ENST00000498530 TMEM74Q96NL1 305 aa8.83□□□□□ -1
PMPCB-208ENST00000498530 SBNO2Q9Y2G9 1366 aa8.83□□□□□ -1
PMPCB-208ENST00000498530 A0A1W2PNR3 127 aa8.82□□□□□ -1
PMPCB-208ENST00000498530 A0A1W2PP55 124 aa8.82□□□□□ -1
PMPCB-208ENST00000498530 CES1P23141 567 aa8.82□□□□□ -1
PMPCB-208ENST00000498530 SOX9P48436 509 aa8.82□□□□□ -1
PMPCB-208ENST00000498530 KCNQ4P56696 695 aa8.82□□□□□ -1
PMPCB-208ENST00000498530 ARSJQ5FYB0 599 aaPredicted RBP8.82□□□□□ -1
PMPCB-208ENST00000498530 LYSMD3Q7Z3D4 306 aa8.82□□□□□ -1
PMPCB-208ENST00000498530 RHOVQ96L33 236 aa8.82□□□□□ -1
PMPCB-208ENST00000498530 H3BM21 787 aa8.81□□□□□ -1
PMPCB-208ENST00000498530 K7ELQ4 463 aaPredicted RBP8.81□□□□□ -1
PMPCB-208ENST00000498530 UPP2O95045 317 aa8.81□□□□□ -1
PMPCB-208ENST00000498530 SSBP05455 408 aaKnown RBP eCLIP8.81□□□□□ -1
PMPCB-208ENST00000498530 HSD3B2P26439 372 aa8.81□□□□□ -1
PMPCB-208ENST00000498530 EIF4A3P38919 411 aaKnown RBP8.81□□□□□ -1
PMPCB-208ENST00000498530 SUZ12Q15022 739 aaKnown RBP8.81□□□□□ -1
PMPCB-208ENST00000498530 CCDC85BQ15834 202 aaPredicted RBP8.81□□□□□ -1
PMPCB-208ENST00000498530 PEAR1Q5VY43 1037 aaPredicted RBP8.81□□□□□ -1
PMPCB-208ENST00000498530 SV2BQ7L1I2 683 aa8.81□□□□□ -1
PMPCB-208ENST00000498530 RELL1Q8IUW5 271 aa8.81□□□□□ -1
PMPCB-208ENST00000498530 MRFAP1L1Q96HT8 127 aa8.81□□□□□ -1
PMPCB-208ENST00000498530 NT5C1AQ9BXI3 368 aa8.81□□□□□ -1
PMPCB-208ENST00000498530 EHD4Q9H223 541 aa8.81□□□□□ -1
PMPCB-208ENST00000498530 ZNF408Q9H9D4 720 aa8.81□□□□□ -1
PMPCB-208ENST00000498530 ABCB6Q9NP58 842 aa8.81□□□□□ -1
PMPCB-208ENST00000498530 ERBB4Q15303 1308 aa8.8□□□□□ -1
PMPCB-208ENST00000498530 BMP1P13497 986 aa8.8□□□□□ -1
PMPCB-208ENST00000498530 TTC39BQ5VTQ0 682 aaPredicted RBP8.8□□□□□ -1
PMPCB-208ENST00000498530 TRIM46Q7Z4K8 759 aa8.8□□□□□ -1
PMPCB-208ENST00000498530 NLRP8Q86W28 1048 aa8.8□□□□□ -1
PMPCB-208ENST00000498530 CEP63Q96MT8 703 aa8.8□□□□□ -1
PMPCB-208ENST00000498530 TIMMDC1Q9NPL8 285 aa8.8□□□□□ -1
PMPCB-208ENST00000498530 SIRPGQ9P1W8 387 aa8.8□□□□□ -1
PMPCB-208ENST00000498530 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.8□□□□□ -1
PMPCB-208ENST00000498530 ENPP3O14638 875 aa8.79□□□□□ -1
PMPCB-208ENST00000498530 NASPP49321 788 aaPredicted RBP8.79□□□□□ -1
PMPCB-208ENST00000498530 TCEAL1Q15170 157 aa8.79□□□□□ -1
PMPCB-208ENST00000498530 OR13H1Q8NG92 308 aa8.79□□□□□ -1
PMPCB-208ENST00000498530 EAF1Q96JC9 268 aaPredicted RBP8.79□□□□□ -1
PMPCB-208ENST00000498530 SPACA7Q96KW9 195 aa8.79□□□□□ -1
PMPCB-208ENST00000498530 OXCT2Q9BYC2 517 aaPredicted RBP8.79□□□□□ -1
PMPCB-208ENST00000498530 ZFYVE1Q9HBF4 777 aa8.79□□□□□ -1
PMPCB-208ENST00000498530 BRD7Q9NPI1 651 aa8.79□□□□□ -1
PMPCB-208ENST00000498530 TMEM238LA0A1B0GVL6 79 aa8.78□□□□□ -1
PMPCB-208ENST00000498530 GBP2P32456 591 aaPredicted RBP8.78□□□□□ -1
PMPCB-208ENST00000498530 FCGRTP55899 365 aa8.78□□□□□ -1
PMPCB-208ENST00000498530 PRICKLE2Q7Z3G6 844 aa8.78□□□□□ -1
PMPCB-208ENST00000498530 PHC3Q8NDX5 983 aa8.78□□□□□ -1
PMPCB-208ENST00000498530 TRIM56Q9BRZ2 755 aaKnown RBP8.78□□□□□ -1
PMPCB-208ENST00000498530 LATS2Q9NRM7 1088 aa8.78□□□□□ -1
PMPCB-208ENST00000498530 SALL4Q9UJQ4 1053 aa8.78□□□□□ -1
PMPCB-208ENST00000498530 KLF4O43474 513 aa8.77□□□□□ -1.01
PMPCB-208ENST00000498530 GREM1O60565 184 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms