RNA–Protein interactions for RNA: ENST00000498524.5

ANKRD28-213, Transcript of ankyrin repeat domain 28, humanhuman

TSL 2

Gene ANKRD28, Length 4,289 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-213ENST00000498524 DPF3Q92784 378 aa4.7□□□□□ -1.66
ANKRD28-213ENST00000498524 SPATA32Q96LK8 384 aa4.7□□□□□ -1.66
ANKRD28-213ENST00000498524 SERPINA10Q9UK55 444 aa4.7□□□□□ -1.66
ANKRD28-213ENST00000498524 PNMA3Q9UL41 463 aa4.7□□□□□ -1.66
ANKRD28-213ENST00000498524 SPHKAPQ2M3C7 1700 aa4.7□□□□□ -1.66
ANKRD28-213ENST00000498524 A0A1W2PP64 1363 aa4.7□□□□□ -1.66
ANKRD28-213ENST00000498524 WDR33Q9C0J8 1336 aaKnown RBP4.7□□□□□ -1.66
ANKRD28-213ENST00000498524 FMNL1O95466 1100 aaPredicted RBP4.7□□□□□ -1.66
ANKRD28-213ENST00000498524 ANKRD45Q5TZF3 282 aa4.7□□□□□ -1.66
ANKRD28-213ENST00000498524 DNAJC10Q8IXB1 793 aa4.7□□□□□ -1.66
ANKRD28-213ENST00000498524 ZGPATQ8N5A5 531 aaKnown RBP4.7□□□□□ -1.66
ANKRD28-213ENST00000498524 SLC52A2Q9HAB3 445 aa4.7□□□□□ -1.66
ANKRD28-213ENST00000498524 VEZTQ9HBM0 779 aa4.7□□□□□ -1.66
ANKRD28-213ENST00000498524 NPC1L1Q9UHC9 1359 aa4.7□□□□□ -1.66
ANKRD28-213ENST00000498524 SH3TC1Q8TE82 1336 aa4.7□□□□□ -1.66
ANKRD28-213ENST00000498524 B4DLN1 442 aa4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 MRPL12P52815 198 aaKnown RBP4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 PIGBQ92521 554 aa4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 LNPKQ9C0E8 428 aa4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 PICK1Q9NRD5 415 aa4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 NSFL1CQ9UNZ2 370 aaKnown RBP4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 CCDC30Q5VVM6 783 aa4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 RGMBQ6NW40 437 aa4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 SPC25Q9HBM1 224 aa4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 LTBP3Q9NS15 1303 aa4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 XRCC6P12956 609 aaKnown RBP eCLIP4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 CALRP27797 417 aaKnown RBP4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 WASHC4Q2M389 1173 aa4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 CRAMP1Q96RY5 1269 aa4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 EFCC1Q9HA90 598 aa4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 BABAM1Q9NWV8 329 aa4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 HYPKQ9NX55 129 aa4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 ABCC6O95255 1503 aa4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 LRP5O75197 1615 aa4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 USP42Q9H9J4 1324 aaKnown RBP4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 RNMTO43148 476 aaKnown RBP4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 LBX1P52954 281 aa4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 GNAI1P63096 354 aa4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 ZNF827Q17R98 1081 aa4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 ZSCAN29Q8IWY8 852 aaPredicted RBP4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 NLGN2Q8NFZ4 835 aa4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 RAET1EQ8TD07 263 aa4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 SYMPKQ92797 1274 aaKnown RBP4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 COA7Q96BR5 231 aa4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 CNNM1Q9NRU3 951 aa4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 SAGE1Q9NXZ1 904 aa4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 TBC1D2BQ9UPU7 963 aa4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 LRRFIP2Q9Y608 721 aaKnown RBP4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 IVNS1ABPQ9Y6Y0 642 aa4.69□□□□□ -1.66
ANKRD28-213ENST00000498524 ERVV-1B6SEH8 477 aa4.68□□□□□ -1.66
ANKRD28-213ENST00000498524 GNRH1P01148 92 aa4.68□□□□□ -1.66
ANKRD28-213ENST00000498524 PTGER2P43116 358 aa4.68□□□□□ -1.66
ANKRD28-213ENST00000498524 AXDND1Q5T1B0 1012 aaPredicted RBP4.68□□□□□ -1.66
ANKRD28-213ENST00000498524 PRPF40BQ6NWY9 871 aaKnown RBP4.68□□□□□ -1.66
ANKRD28-213ENST00000498524 PPME1Q9Y570 386 aa4.68□□□□□ -1.66
ANKRD28-213ENST00000498524 K7ELQ4 463 aaPredicted RBP4.68□□□□□ -1.66
ANKRD28-213ENST00000498524 CDC45O75419 566 aa4.68□□□□□ -1.66
ANKRD28-213ENST00000498524 IFIT1P09914 478 aaKnown RBP4.68□□□□□ -1.66
ANKRD28-213ENST00000498524 CCNA1P78396 465 aa4.68□□□□□ -1.66
ANKRD28-213ENST00000498524 NKX1-1Q15270 411 aaPredicted RBP4.68□□□□□ -1.66
ANKRD28-213ENST00000498524 HSP90AB2PQ58FF8 381 aa4.68□□□□□ -1.66
ANKRD28-213ENST00000498524 TBC1D22AQ8WUA7 517 aa4.68□□□□□ -1.66
ANKRD28-213ENST00000498524 BSDC1Q9NW68 430 aaPredicted RBP4.68□□□□□ -1.66
ANKRD28-213ENST00000498524 PPP2R3BQ9Y5P8 575 aa4.68□□□□□ -1.66
ANKRD28-213ENST00000498524 NWD2Q9ULI1 1742 aa4.68□□□□□ -1.66
ANKRD28-213ENST00000498524 COL15A1P39059 1388 aa4.68□□□□□ -1.66
ANKRD28-213ENST00000498524 REC8O95072 547 aa4.68□□□□□ -1.66
ANKRD28-213ENST00000498524 ZSCAN30Q86W11 494 aa4.68□□□□□ -1.66
ANKRD28-213ENST00000498524 TRIM47Q96LD4 638 aa4.68□□□□□ -1.66
ANKRD28-213ENST00000498524 C9orf78Q9NZ63 289 aaPredicted RBP4.68□□□□□ -1.66
ANKRD28-213ENST00000498524 HMMRO75330 724 aa4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 RABEP1Q15276 862 aa4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 CCDC57Q2TAC2 916 aa4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 BRDTQ58F21 947 aaPredicted RBP4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 PPP4R3BQ5MIZ7 849 aa4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 KIAA1211Q6ZU35 1233 aa4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 APBB1IPQ7Z5R6 666 aaPredicted RBP4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 TRMT44Q8IYL2 757 aaKnown RBP4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 MORC4Q8TE76 937 aa4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 GTF3C2Q8WUA4 911 aaPredicted RBP4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 DRC1Q96MC2 740 aa4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 EYA1Q99502 592 aa4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 TAF1DQ9H5J8 278 aaPredicted RBP4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 XRN1Q8IZH2 1706 aaKnown RBP4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 SH3BP5O60239 455 aa4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 CHRM1P11229 460 aaPredicted RBP4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 RIPK4P57078 832 aa4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 EXOSC9Q06265 439 aaKnown RBP4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 NBPF10Q6P3W6 841 aaKnown RBP4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 MICAL1Q8TDZ2 1067 aa4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 SMCR8Q8TEV9 937 aaPredicted RBP4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 HHIPL1Q96JK4 782 aa4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 API5Q9BZZ5 524 aaKnown RBP4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 AS3MTQ9HBK9 375 aa4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 FAM13BQ9NYF5 915 aa4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 ASAP1Q9ULH1 1129 aa4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 ITSN1Q15811 1721 aa4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 PEX14O75381 377 aa4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 HMOX1P09601 288 aa4.67□□□□□ -1.66
ANKRD28-213ENST00000498524 GSTO1P78417 241 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms