RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 KANSL3Q9P2N6 904 aa7.81□□□□□ -1.16
PTPRK-215ENST00000498284 LOC102724428A0A0B4J2F2 783 aa7.8□□□□□ -1.16
PTPRK-215ENST00000498284 SHISA8B8ZZ34 492 aa7.8□□□□□ -1.16
PTPRK-215ENST00000498284 EIF1AYO14602 144 aaKnown RBP7.8□□□□□ -1.16
PTPRK-215ENST00000498284 EREGO14944 169 aa7.8□□□□□ -1.16
PTPRK-215ENST00000498284 SIK1P57059 783 aa7.8□□□□□ -1.16
PTPRK-215ENST00000498284 MAP3K10Q02779 954 aa7.8□□□□□ -1.16
PTPRK-215ENST00000498284 FMR1Q06787 632 aaKnown RBP eCLIP7.8□□□□□ -1.16
PTPRK-215ENST00000498284 COL13A1Q5TAT6 717 aaPredicted RBP7.8□□□□□ -1.16
PTPRK-215ENST00000498284 HFE2Q6ZVN8 426 aa7.8□□□□□ -1.16
PTPRK-215ENST00000498284 FAM35AQ86V20 835 aa7.8□□□□□ -1.16
PTPRK-215ENST00000498284 SVOPQ8N4V2 548 aa7.8□□□□□ -1.16
PTPRK-215ENST00000498284 DNAJC25Q9H1X3 360 aa7.8□□□□□ -1.16
PTPRK-215ENST00000498284 AMOTL2Q9Y2J4 779 aa7.8□□□□□ -1.16
PTPRK-215ENST00000498284 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.8□□□□□ -1.16
PTPRK-215ENST00000498284 J3QW42 95 aa7.79□□□□□ -1.16
PTPRK-215ENST00000498284 CPNE3O75131 537 aaKnown RBP7.79□□□□□ -1.16
PTPRK-215ENST00000498284 KIF4AO95239 1232 aa7.79□□□□□ -1.16
PTPRK-215ENST00000498284 CPB1P15086 417 aa7.79□□□□□ -1.16
PTPRK-215ENST00000498284 ERCC3P19447 782 aa7.79□□□□□ -1.16
PTPRK-215ENST00000498284 USPL1Q5W0Q7 1092 aa7.79□□□□□ -1.16
PTPRK-215ENST00000498284 NPAS4Q8IUM7 802 aa7.79□□□□□ -1.16
PTPRK-215ENST00000498284 BTBD6Q96KE9 485 aa7.79□□□□□ -1.16
PTPRK-215ENST00000498284 CSRNP1Q96S65 589 aa7.79□□□□□ -1.16
PTPRK-215ENST00000498284 SALL4Q9UJQ4 1053 aa7.79□□□□□ -1.16
PTPRK-215ENST00000498284 POLR3DP05423 398 aaPredicted RBP7.78□□□□□ -1.16
PTPRK-215ENST00000498284 P4HBP07237 508 aaKnown RBP7.78□□□□□ -1.16
PTPRK-215ENST00000498284 AMPD1P23109 780 aa7.78□□□□□ -1.16
PTPRK-215ENST00000498284 MAPK8P45983 427 aa7.78□□□□□ -1.16
PTPRK-215ENST00000498284 GSK3AP49840 483 aa7.78□□□□□ -1.16
PTPRK-215ENST00000498284 COL19A1Q14993 1142 aa7.78□□□□□ -1.16
PTPRK-215ENST00000498284 NCAPG2Q86XI2 1143 aa7.78□□□□□ -1.16
PTPRK-215ENST00000498284 ENAMQ9NRM1 1142 aa7.78□□□□□ -1.16
PTPRK-215ENST00000498284 NAGPAQ9UK23 515 aa7.78□□□□□ -1.16
PTPRK-215ENST00000498284 STARD13Q9Y3M8 1113 aa7.78□□□□□ -1.16
PTPRK-215ENST00000498284 CCDC9Q9Y3X0 531 aaKnown RBP7.78□□□□□ -1.16
PTPRK-215ENST00000498284 PNMA6FA0A0J9YX94 578 aa7.77□□□□□ -1.17
PTPRK-215ENST00000498284 GHRHP01286 108 aa7.77□□□□□ -1.17
PTPRK-215ENST00000498284 EIF2AK2P19525 551 aaKnown RBP7.77□□□□□ -1.17
PTPRK-215ENST00000498284 ENOX2Q16206 610 aaKnown RBP7.77□□□□□ -1.17
PTPRK-215ENST00000498284 CHSY3Q70JA7 882 aa7.77□□□□□ -1.17
PTPRK-215ENST00000498284 CEP120Q8N960 986 aa7.77□□□□□ -1.17
PTPRK-215ENST00000498284 NEDD1Q8NHV4 660 aa7.77□□□□□ -1.17
PTPRK-215ENST00000498284 SPACA7Q96KW9 195 aa7.77□□□□□ -1.17
PTPRK-215ENST00000498284 ARHGEF15O94989 841 aa7.76□□□□□ -1.17
PTPRK-215ENST00000498284 EDN3P14138 238 aa7.76□□□□□ -1.17
PTPRK-215ENST00000498284 PERM1Q5SV97 790 aa7.76□□□□□ -1.17
PTPRK-215ENST00000498284 PSAPL1Q6NUJ1 521 aa7.76□□□□□ -1.17
PTPRK-215ENST00000498284 KANK3Q6NY19 840 aa7.76□□□□□ -1.17
PTPRK-215ENST00000498284 ELMSAN1Q6PJG2 1045 aa7.76□□□□□ -1.17
PTPRK-215ENST00000498284 GALNT12Q8IXK2 581 aa7.76□□□□□ -1.17
PTPRK-215ENST00000498284 RBSNQ9H1K0 784 aa7.76□□□□□ -1.17
PTPRK-215ENST00000498284 EAPPQ56P03 285 aaPredicted RBP7.75□□□□□ -1.17
PTPRK-215ENST00000498284 CCDC74AQ96AQ1 378 aa7.75□□□□□ -1.17
PTPRK-215ENST00000498284 PLD4Q96BZ4 506 aa7.75□□□□□ -1.17
PTPRK-215ENST00000498284 LOC100996750A0A140TA64 210 aa7.74□□□□□ -1.17
PTPRK-215ENST00000498284 RGS9O75916 674 aaPredicted RBP7.74□□□□□ -1.17
PTPRK-215ENST00000498284 ALBP02768 609 aa7.74□□□□□ -1.17
PTPRK-215ENST00000498284 C20orf204Q6ZNR8 217 aa7.74□□□□□ -1.17
PTPRK-215ENST00000498284 MICALL1Q8N3F8 863 aa7.74□□□□□ -1.17
PTPRK-215ENST00000498284 NUDT8Q8WV74 236 aa7.74□□□□□ -1.17
PTPRK-215ENST00000498284 LPIN3Q9BQK8 851 aa7.74□□□□□ -1.17
PTPRK-215ENST00000498284 KRTAP4-6Q9BYQ5 205 aa7.74□□□□□ -1.17
PTPRK-215ENST00000498284 SMG9Q9H0W8 520 aaKnown RBP7.74□□□□□ -1.17
PTPRK-215ENST00000498284 LATS2Q9NRM7 1088 aa7.74□□□□□ -1.17
PTPRK-215ENST00000498284 FRRS1LQ9P0K9 344 aa7.74□□□□□ -1.17
PTPRK-215ENST00000498284 M0R082 166 aa7.73□□□□□ -1.17
PTPRK-215ENST00000498284 LDHBP07195 334 aaKnown RBP7.73□□□□□ -1.17
PTPRK-215ENST00000498284 ACPPP15309 386 aa7.73□□□□□ -1.17
PTPRK-215ENST00000498284 ATP11AP98196 1134 aa7.73□□□□□ -1.17
PTPRK-215ENST00000498284 ATP2B2Q01814 1243 aa7.73□□□□□ -1.17
PTPRK-215ENST00000498284 PEAR1Q5VY43 1037 aaPredicted RBP7.73□□□□□ -1.17
PTPRK-215ENST00000498284 ZNF417Q8TAU3 575 aa7.73□□□□□ -1.17
PTPRK-215ENST00000498284 ZNF587Q96SQ5 575 aaPredicted RBP7.73□□□□□ -1.17
PTPRK-215ENST00000498284 SETDB2Q96T68 719 aa7.73□□□□□ -1.17
PTPRK-215ENST00000498284 PBX4Q9BYU1 374 aa7.73□□□□□ -1.17
PTPRK-215ENST00000498284 RASSF4Q9H2L5 321 aa7.73□□□□□ -1.17
PTPRK-215ENST00000498284 RRAGCQ9HB90 399 aa7.73□□□□□ -1.17
PTPRK-215ENST00000498284 JPH1Q9HDC5 661 aaPredicted RBP7.73□□□□□ -1.17
PTPRK-215ENST00000498284 NPHS2Q9NP85 383 aa7.73□□□□□ -1.17
PTPRK-215ENST00000498284 DZANK1Q9NVP4 752 aa7.73□□□□□ -1.17
PTPRK-215ENST00000498284 WWC3Q9ULE0 1092 aa7.73□□□□□ -1.17
PTPRK-215ENST00000498284 IRS1P35568 1242 aa7.72□□□□□ -1.17
PTPRK-215ENST00000498284 KCNMA1Q12791 1236 aa7.72□□□□□ -1.17
PTPRK-215ENST00000498284 ALG1LQ6GMV1 187 aa7.72□□□□□ -1.17
PTPRK-215ENST00000498284 FBXO33Q7Z6M2 555 aa7.72□□□□□ -1.17
PTPRK-215ENST00000498284 EPS8L3Q8TE67 593 aaKnown RBP7.72□□□□□ -1.17
PTPRK-215ENST00000498284 FBF1Q8TES7 1133 aa7.72□□□□□ -1.17
PTPRK-215ENST00000498284 TTC9Q92623 222 aa7.72□□□□□ -1.17
PTPRK-215ENST00000498284 OSMRQ99650 979 aa7.72□□□□□ -1.17
PTPRK-215ENST00000498284 ZKSCAN3Q9BRR0 538 aa7.72□□□□□ -1.17
PTPRK-215ENST00000498284 A0A1W2PP55 124 aa7.71□□□□□ -1.18
PTPRK-215ENST00000498284 LILRB5O75023 590 aa7.71□□□□□ -1.18
PTPRK-215ENST00000498284 TRPA1O75762 1119 aa7.71□□□□□ -1.18
PTPRK-215ENST00000498284 SMNDC1O75940 238 aaKnown RBP eCLIP7.71□□□□□ -1.18
PTPRK-215ENST00000498284 HOXB4P17483 251 aaPredicted RBP7.71□□□□□ -1.18
PTPRK-215ENST00000498284 CEP135Q66GS9 1140 aa7.71□□□□□ -1.18
PTPRK-215ENST00000498284 C8orf86Q6ZUL3 223 aa7.71□□□□□ -1.18
PTPRK-215ENST00000498284 RGS22Q8NE09 1264 aa7.71□□□□□ -1.18
PTPRK-215ENST00000498284 PRDM6Q9NQX0 595 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms